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Resource Name
pychromVAR
RRID:SCR_027456 RRID Copied      
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 pychromVAR (RRID:SCR_027456)
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Resource Information

URL: https://github.com/pinellolab/pychromVAR

Proper Citation: pychromVAR (RRID:SCR_027456)

Description: Software Python package for inferring transcription factor binding variability from scATAC-seq data by implmenting algorithm proposed in chromVAR. It is built on anndata and mudata therefore can work seamlessly with scanpy and muon pipeline.

Resource Type: software resource, software toolkit

Keywords: inferring transcription factor binding variability, scATAC-seq data,

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This resource

uses

chromvar

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