Integrated Animals is a virtual database currently indexing available animal strains and mutants from: AGSC (Ambystoma), BCBC (mice), BDSC (flies), European Xenopus Resource Center (frog), The National Xenopus Resource (frog), Xenopus Express (frog), CWRU Cystic Fibrosis Mouse Models (mice), DGGR (flies), FlyBase (flies), IMSR (mice), MGI (mice), MMRRC (mice), NSRRC (pig), RGD (rats), Sperm Stem Cell Libraries for Biological Research (rats), Tetrahymena Stock Center (Tetrahymena), WormBase (worms), XGSC (Xiphophorus), ZFIN (zebrafish), and ZIRC (zebrafish). Note, the IMSR data is linked, but users may need to re-execute the search if the top mouse is not returned properly.
Note: BCBC is no longer in service, so the links may not be functional.
| Organism Name | Proper Citation | Species | Synonyms |
Notes |
Phenotype | Affected Gene | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
Caenorhabditis elegans with no genotype reported Resource Report The record is no longer available at this source. |
RRID:WB-STRAIN:ZZY0041 | Caenorhabditis elegans | (null) This is a legacy resource. | (null) | ZZY0041 | (null) | WB, WormBase (WB) | WB | Not Available | 2024-01-31 07:40:23 | 0 | |||||
|
Caenorhabditis elegans with no genotype reported Resource Report The record is no longer available at this source. |
RRID:WB-STRAIN:TRG_1481 | Caenorhabditis elegans | (null) This is a legacy resource. | (null) | TRG_1481 | (null) | WB, WormBase (WB) | WB | Not Available | 2024-01-31 07:40:22 | 0 | |||||
|
Caenorhabditis elegans with no genotype reported Resource Report The record is no longer available at this source. |
RRID:WB-STRAIN:TRG_1482 | Caenorhabditis elegans | (null) This is a legacy resource. | (null) | TRG_1482 | (null) | WB, WormBase (WB) | WB | Not Available | 2024-01-31 07:40:22 | 0 | |||||
|
Caenorhabditis elegans with no genotype reported Resource Report The record is no longer available at this source. |
RRID:WB-STRAIN:WN046 | Caenorhabditis elegans | (null) This is a legacy resource. | (null) | WN046 | (null) | WB, WormBase (WB) | WB | Not Available | 2024-01-31 07:40:22 | 0 | |||||
|
AM138 Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00000181 | Caenorhabditis elegans | rmIs130 II. | Mutagen:Gamma Rays|"rmIs130 [unc-54p::Q24::YFP]. Diffuse distribution of Q24::YFP throughout the body-wall muscle cells." | WB-STRAIN:WBStrain00000181 | WormBase (WB) | WB | available | EMPTY | WB-STRAIN:AM138, CGC_AM138 | 2026-02-14 12:10:02 | 0 | ||||
|
AM134 Resource Report Resource Website 1+ mentions |
RRID:WB-STRAIN:WBStrain00000180 | Caenorhabditis elegans | rmIs126. | Made_by: S. Garcia/A Chavez|"Mutagen:Gamma Rays"|"rmIs126 [unc-54p::Q0::YFP]. Diffuse distribution of Q0::YFP throughout the body-wall muscle cells. [NOTE: (04/29/13) Strain is reported as incorrect -- apparently carries 20Q transgene. Working on obtaining a replacement.]" | WBGene00006789(unc-54) | WBGene00006789(unc-54) | WB-STRAIN:WBStrain00000180 | WormBase (WB) | WB | available | PMID:38714700 | WB-STRAIN:AM134, CGC_AM134 | 2026-02-14 12:10:02 | 2 | ||
|
AM101 Resource Report Resource Website 1+ mentions |
RRID:WB-STRAIN:WBStrain00000178 | Caenorhabditis elegans | rmIs110. | Mutagen:Gamma rays|"rmIs110 [F25B3.3p::Q40::YFP]. Pan-neuronal YFP expression. Reference: Gidalevitz T, et al., Science. 2006 Mar 10;311(5766):1471-4."|"Supplementary_genotype (rmIs110[F25B3.3p::Q40::YFP])"|"Supplementary_genotype rmls110 [F25B3.3p::Q40::YFP]"|"WBStrain provided so WBPaper00061396 paper added based on AFP_Strain data." | WBGene00009100(rgef-1) | WBGene00009100(rgef-1) | WB-STRAIN:WBStrain00000178 | WormBase (WB) | WB | available | PMID:33956916 PMID:37103980 PMID:37938769 PMID:37783816 PMID:38177330 PMID:38852157 PMID:39950089 |
WB-STRAIN:AM101, CGC_AM101 | 2026-02-14 12:10:02 | 6 | ||
|
AM102 Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00000179 | Caenorhabditis elegans | EMPTY | EMPTY | WBGene00009100(rgef-1) | WBGene00009100(rgef-1) | WB-STRAIN:WBStrain00000179 | WormBase (WB) | WB | unknown | EMPTY | WB-STRAIN:AM102 | 2026-02-14 12:10:02 | 0 | ||
|
AM44 Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00000176 | Caenorhabditis elegans | rmIs190. | Made_by: S Tang & H Brignull|"Mutagen:Gamma rays"|"rmIs190 [F25B3.3p::Q67::CFP]. Pan-neuronal CFP expression."|"Supplementary_genotype rmls190 [F25B3.3p::Q67::CFP]" | WB-STRAIN:WBStrain00000176 | WormBase (WB) | WB | available | PMID:37938769 | WB-STRAIN:AM44, CGC_AM44 | 2026-02-14 12:10:02 | 0 | ||||
|
AML70 Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00000194 | Caenorhabditis elegans | lite-1(ce314) X; wtfIs5. | wtfIs5 [rab-3p::NLS::GCaMP6s + rab-3p::NLS::tagRFP]. Integrated calcium indicator GCaMP6s and calcium-insensitive fluorescent protein RFP in the nuclei of all neurons in a lite-1(ce314) background. Reference (wtfIs5): Nguyen JP, et al. PLoS Comput Biol. 2017 May 18;13(5):e1005517.|"wtfIs5 [rab-3p::NLS::GCaMP6s + rab-3p::NLS::tagRFP]. Integrated calcium indicator GCaMP6s and calcium-insensitive fluorescent protein RFP in the nuclei of all neurons in a lite-1(ce314) mutant background. Derived from parental strain AML14 by integration of wtfEx4. Reference: Gauthey W, et al. Curr Biol. 2024 Jan 8;34(1):R14-R15. doi: 10.1016/j.cub.2023.10.043. PMID: 38194919." | WBGene00001803(lite-1) | WBGene00001803(lite-1) | WB-STRAIN:WBStrain00000194 | WormBase (WB) | WB | available | PMID:33625357 PMID:38194919 |
WB-STRAIN:AML70, CGC_AML70 | 2026-02-14 12:10:02 | 0 | ||
|
AML14 Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00000190 | Caenorhabditis elegans | wtfEx4. | Made_by: G Plummer & S Setu|"wtfEx4 [rab-3p::NLS::GCaMP6s + rab-3p::NLS::tagRFP]. Pick RFP+ to maintain array. Reference: Nguyen JP, et al. Proc Natl Acad Sci U S A. 2016 Feb 23;113(8):E1074-81." | WB-STRAIN:WBStrain00000190 | WormBase (WB) | WB | available | EMPTY | WB-STRAIN:AML14, CGC_AML14 | 2026-02-14 12:10:02 | 0 | ||||
|
AGD850 Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00000109 | Caenorhabditis elegans | rmIs110; uthEx557. | rmIs110 [F25B3.3p::Q40::YFP]. uthEx557 [sur5p::rpn-6 + myo3p::GFP]. All animals will express YFP in nervous system; pick animals with GFP expression in body wall muscle to maintain. Reference: Vilchez D, et al. Nature. 2012 Sep 13;489(7415):263-8. | WB-STRAIN:WBStrain00000109 | WormBase (WB) | WB | available | EMPTY | WB-STRAIN:AGD850, CGC_AGD850 | 2026-02-14 12:10:01 | 0 | ||||
|
AGD470 Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00000102 | Caenorhabditis elegans | uthEx493. | uthEx493 [crtc-1p::crtc-1 cDNA (S76A)::tdTomato + rol-6(su1006)]. Pick Rollers to maintain. Reference: Mair W, et al. Nature. 2011 Feb 17;470(7334):404-8. | WB-STRAIN:WBStrain00000102 | WormBase (WB) | WB | available | EMPTY | WB-STRAIN:AGD470, CGC_AGD470 | 2026-02-14 12:10:01 | 0 | ||||
|
AM725 Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00000185 | Caenorhabditis elegans | rmIs290. | Mutagen:Gamma rays|"rmIs290 [unc-54p::Hsa-sod-1 (127X)::YFP]. Array encodes mutated form of human SOD-1. YFP expression in body wall muscle. Array is prone to silencing; maintain by picking worms displaying typical aggregation patterns. Reference: Gidalevitz T, et al., PLoS Genet. 2009 Mar;5(3):e1000399." | WB-STRAIN:WBStrain00000185 | WormBase (WB) | WB | available | EMPTY | WB-STRAIN:AM725, CGC_AM725 | 2026-02-14 12:10:02 | 0 | ||||
|
AMJ345 Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00000186 | Caenorhabditis elegans | jamSi2 II; rde-1(ne219) V. | jamSi2 [mex-5p::rde-1(+)] II. mex-5p::rde-1(+) inserted into ttTi5605 on LG II. Tissue-specific RNAi rescue allows silencing in germline and intestine. Reference: Marre JA, et al. Proc Natl Acad Sci USA. 2016.|"WBStrain provided so WBPaper00061852 paper added based on AFP_Strain data." | WBGene00004323(rde-1) | WBGene00004323(rde-1) | WB-STRAIN:WBStrain00000186 | WormBase (WB) | WB | available | PMID:34449775 | WB-STRAIN:AMJ345, CGC_AMJ345 | 2026-02-14 12:10:02 | 0 | ||
|
AML1 Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00000187 | Caenorhabditis elegans | zfIs18; zfIs42. | Made_by: Frederick Shipley|"zfIs18 [mec-4p::ChR2::YFP]. zfIs42 [rig-3p::GCaMP3::SL2::mCherry]. Pick mCherry+ animals to maintain strong expression from zfIs42. Worm expresses light-sensitive Channelrhodopsin (ChR2) and yellow fluorescent protein (YFP) in mechanosensory neurons, ALMR/L, AVM, PLML/R, and PVM. When fed all-trans retinal, blue light stimulation (473 nm at 2 mW * mm^-2) of head induces reversals. GCaMP3 and and mCherry expression in command interneurons AVA, and nearby pharyngeal neurons I1, I4, M4, NSM. Worms were made by crossing the integrated strains QW309 and QW625. Reference: Shipley FB, et al. Front Neural Circuits. 2014 Mar 24;8:28." | WB-STRAIN:WBStrain00000187 | WormBase (WB) | WB | available | EMPTY | WB-STRAIN:AML1, CGC_AML1 | 2026-02-14 12:10:02 | 0 | ||||
|
AML5 Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00000188 | Caenorhabditis elegans | otIs355 IV; lin-15B&lin-15A(n765) X; kyIs51. | otIs355 [rab-3p(prom1)::2xNLS::TagRFP] IV. kyIs51 [odr-2b::GFP + lin-15(+)]. Pan-neuronal nuclear RFP expression. Cytoplasmic GFP expressed in the odr-2b neurons including AIZ, AIB, SIAV, AVG, RIV, ASG and IL2 neurons. Derived from parental strains QW1155 and CX3300. Reference: Nguyen JP, et al. Proc Natl Acad Sci U S A. 2016 Feb 23;113(8):E1074-81. | WBGene00023497(lin-15B)|WBGene00023498(lin-15A) | WBGene00023497(lin-15B), WBGene00023498(lin-15A) | WB-STRAIN:WBStrain00000188 | WormBase (WB) | WB | available | PMID:33625357 | WB-STRAIN:AML5, CGC_AML5 | 2026-02-14 12:10:02 | 0 | ||
|
AGD926 Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00000116 | Caenorhabditis elegans | zcIs4 V; uthIs269. | zcIs4 [hsp-4::GFP] V. uthIs269 [sur-5p::hsf-1::unc-54 3'UTR + myo-2p::tdTomato::unc-54 3' UTR]. ER stress resistence. Reference: Taylor RC, Dillin A. Cell. 2013 Jun 20;153(7):1435-47. | WB-STRAIN:WBStrain00000116 | WormBase (WB) | WB | available | EMPTY | WB-STRAIN:AGD926, CGC_AGD926 | 2026-02-14 12:10:02 | 0 | ||||
|
AGD927 Resource Report Resource Website 1+ mentions |
RRID:WB-STRAIN:WBStrain00000117 | Caenorhabditis elegans | uthIs270. | uthIs270 [rab-3p::xbp-1s (constitutively active) + myo-2p::tdTomato]. Pick animals with red pharynx to maintain. Reference: Taylor RC, Dillin A. Cell. 2013 Jun 20;153(7):1435-47.|"WBStrain provided so WBPaper00061805 paper added based on AFP_Strain data." | WB-STRAIN:WBStrain00000117 | WormBase (WB) | WB | available | PMID:34407398 | WB-STRAIN:AGD927, CGC_AGD927 | 2026-02-14 12:10:02 | 2 | ||||
|
AGD945 Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00000118 | Caenorhabditis elegans | uthEx649. | uthEx649 [rpn-6p::tdTomato + rol-6(su1006)]. Rollers. Pick rollers to maintain array. Reference: Vilchez D, et al. Nature. 2012 Sep 13;489(7415):263-8. | WB-STRAIN:WBStrain00000118 | WormBase (WB) | WB | available | EMPTY | WB-STRAIN:AGD945, CGC_AGD945 | 2026-02-14 12:10:02 | 0 |
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