Integrated Animals is a virtual database currently indexing available animal strains and mutants from: AGSC (Ambystoma), BCBC (mice), BDSC (flies), European Xenopus Resource Center (frog), The National Xenopus Resource (frog), Xenopus Express (frog), CWRU Cystic Fibrosis Mouse Models (mice), DGGR (flies), FlyBase (flies), IMSR (mice), MGI (mice), MMRRC (mice), NSRRC (pig), RGD (rats), Sperm Stem Cell Libraries for Biological Research (rats), Tetrahymena Stock Center (Tetrahymena), WormBase (worms), XGSC (Xiphophorus), ZFIN (zebrafish), and ZIRC (zebrafish). Note, the IMSR data is linked, but users may need to re-execute the search if the top mouse is not returned properly.
Note: BCBC is no longer in service, so the links may not be functional.
http://www.wormbase.org/db/get?name=WBStrain00031293
Source Database: WormBase (WB)
Genetic Background:
Affected Genes:
Genomic Alteration:
Availability: unknown
References:
Synonyms: Caenorhabditis elegans wild isolate.
Notes: Isolated from a sample of Jason Stajich's compost bin outside his apartment at 1464 Hopkins St., Berkeley, CA. The compost was spread on OP50 on 27 Nov and individual dauers selfed. The sample contained 1000s of dauers.
Proper citation: RRID:WB-STRAIN:WBStrain00031293 Copy
http://www.wormbase.org/db/get?name=WBStrain00031218
Source Database: WormBase (WB)
Genetic Background:
Affected Genes:
Genomic Alteration:
Availability: unknown
References:
Synonyms: Caenorhabditis elegans wild isolate.
Notes: Added Wild_Isolate tag as Isolation information is available suggesting that they were sampled from the wild.
Proper citation: RRID:WB-STRAIN:WBStrain00031218 Copy
http://www.wormbase.org/db/get?name=WBStrain00031215
Source Database: WormBase (WB)
Genetic Background:
Affected Genes:
Genomic Alteration:
Availability: unknown
References:
Synonyms: Caenorhabditis elegans wild isolate.
Notes: Added Wild_Isolate tag as Isolation information is available suggesting that they were sampled from the wild.
Proper citation: RRID:WB-STRAIN:WBStrain00031215 Copy
http://www.wormbase.org/db/get?name=WBStrain00031214
Source Database: WormBase (WB)
Genetic Background:
Affected Genes:
Genomic Alteration:
Availability: unknown
References:
Synonyms: Caenorhabditis elegans wild isolate.
Notes: Added Wild_Isolate tag as Isolation information is available suggesting that they were sampled from the wild.
Proper citation: RRID:WB-STRAIN:WBStrain00031214 Copy
http://www.wormbase.org/db/get?name=WBStrain00031266
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00045243(chep-1)
Genomic Alteration: WBGene00045243(chep-1)
Availability: available
References:
Synonyms: chep-1(qr1).
Notes: Weak chemotaxis toward diacetyl. Possibly due to the weak chemotaxis toward diacetyl, qr1 were more preferentialy attracted by sodium acetate than WT in simultaneous two-spot presentation of sodium acetate and diacetyl. Mutagen used was Mos1 transposon, but it is not an insertion allele.
Proper citation: RRID:WB-STRAIN:WBStrain00031266 Copy
http://www.wormbase.org/db/get?name=WBStrain00031262
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00006843(unc-119)
Genomic Alteration: WBGene00006843(unc-119)
Availability: available
References:
Synonyms: unc-119(ed3) III; vhIs24.
Notes: vhIs24 [vha-6p::GFP::rab-5 Q78L + Cbr-unc-119(+)]. Large endosomes in the intestinal cells.
Proper citation: RRID:WB-STRAIN:WBStrain00031262 Copy
http://www.wormbase.org/db/get?name=WBStrain00031261
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00006843(unc-119)
Genomic Alteration: WBGene00006843(unc-119)
Availability: available
References:
Synonyms: unc-119(ed3) III; vhIs6.
Notes: vhIs6 [vha-6p::mCherry::tbc-2(R689K) + Cbr-unc-119(+)]. mCherry::TBC-2(R689K) is expressed in the intestine.
Proper citation: RRID:WB-STRAIN:WBStrain00031261 Copy
http://www.wormbase.org/db/get?name=WBStrain00031268
Source Database: WormBase (WB)
Genetic Background:
Affected Genes:
Genomic Alteration:
Availability: available
References:
Synonyms: izEx5.
Notes: izEx5 [lgg-1p::GFP::lgg-1 + odr-1p::RFP]. Pick RFP+/GFP+ animals to maintain. Reference: Lapierre LR, Curr Biol. 2011 Sep 27;21(18):1507-14.
Proper citation: RRID:WB-STRAIN:WBStrain00031268 Copy
http://www.wormbase.org/db/get?name=WBStrain00031301
Source Database: WormBase (WB)
Genetic Background:
Affected Genes:
Genomic Alteration:
Availability: available
References:
Synonyms: Caenorhabditis elegans wild isolate.
Notes: C. elegans wild isolate. Reference: Andersen EC, et al. Nat Genet. 2012 Jan 29;44(3):285-90.
Proper citation: RRID:WB-STRAIN:WBStrain00031301 Copy
http://www.wormbase.org/db/get?name=WBStrain00031273
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00004804(skn-1)
Genomic Alteration: WBGene00004804(skn-1)
Availability: available
References:
Synonyms: skn-1(zj15) IV.
Notes: Hypomorphic allele of skn-1 that may be propagated as a homozygote. High rate of embryonic lethality and slightly lower brood size compared to N2. Reference: Tang L, Dodd W, Choe K. G3 (Bethesda). 2015 Dec 29.|"Reference WBPaper00059755 added based on published strain data identified by Textpresso literature search."|"Supplementary_genotype [skn-1(zj15) IV.]"
Proper citation: RRID:WB-STRAIN:WBStrain00031273 Copy
http://www.wormbase.org/db/get?name=WBStrain00031272
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00004804(skn-1)
Genomic Alteration: WBGene00004804(skn-1)
Availability: available
References:
Synonyms: dvIs19 III; skn-1(zj15) IV.
Notes: dvIs19 [(pAF15) gst-4p::GFP::NLS] III. Hypomorphic allele of skn-1 that may be propagated as a homozygote. High rate of embryonic lethality and slightly lower brood size compared to N2. Reference: Tang L, Dodd W, Choe K. G3 (Bethesda). 2015 Dec 29.
Proper citation: RRID:WB-STRAIN:WBStrain00031272 Copy
http://www.wormbase.org/db/get?name=WBStrain00031279
Source Database: WormBase (WB)
Genetic Background:
Affected Genes:
Genomic Alteration:
Availability: available
References:
Synonyms: Caenorhabditis elegans wild isolate.
Notes: C. elegans wild isolate. Reference: Andersen EC, et al. Nat Genet. 2012 Jan 29;44(3):285-90.|"Supplementary_genotype"
Proper citation: RRID:WB-STRAIN:WBStrain00031279 Copy
http://www.wormbase.org/db/get?name=WBStrain00031281
Source Database: WormBase (WB)
Genetic Background:
Affected Genes:
Genomic Alteration:
Availability: unknown
References:
Synonyms: Caenorhabditis elegans wild isolate.
Notes: Isolated from soil underneath an orange-half staked out in the backyard of 363 Jersey St. for three days. The soil and orange bits were plated on OP50 on 27 Nov and on 29 Nov six young adult hermaphrodites were detected. Each was singled to found a line, QX1211-1216.
Proper citation: RRID:WB-STRAIN:WBStrain00031281 Copy
http://www.wormbase.org/db/get?name=WBStrain00031280
Source Database: WormBase (WB)
Genetic Background:
Affected Genes:
Genomic Alteration:
Availability: unknown
References:
Synonyms: Caenorhabditis elegans wild isolate.
Notes: Isolated from soil underneath an orange-half staked out in the backyard of 363 Jersey St. for three days. The soil and orange bits were plated on OP50 on 27 Nov and on 29 Nov six young adult hermaphrodites were detected. Each was singled to found a line, QX1211-1216.
Proper citation: RRID:WB-STRAIN:WBStrain00031280 Copy
http://www.wormbase.org/db/get?name=WBStrain00031364
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00016906(C53D5.5)
Genomic Alteration: WBGene00016906(C53D5.5)
Availability: available
References:
Synonyms: C53D5.5(ok311) I.
Notes: C53D5.5. Homozygous. Outer Left Sequence: ccagcttctagccgcataac. Outer Right Sequence: caggtctcgaaacgaccaat. Inner Left Sequence: cccgtttttcagctttgtgt. Inner Right Sequence: acgggcaatattttcggaat. Inner primer WT PCR product: 2904.|"Made_by: OMRF Knockout Group"|"Mutagen:UV/TMP"|"This strain was provided by the C. elegans Gene Knockout Project at the Oklahoma Medical Research Foundation, which was part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use."
Proper citation: RRID:WB-STRAIN:WBStrain00031364 Copy
http://www.wormbase.org/db/get?name=WBStrain00031361
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00006406(srgp-1)
Genomic Alteration: WBGene00006406(srgp-1)
Availability: available
References:
Synonyms: srgp-1(ok300) IV.
Notes: F12F6.5. Homozygous. Outer Left Sequence: GATGTGAAGGCTGACAAGCA. Outer Right Sequence: TAACCCGTGCATTTGTTGAA. Inner Left Sequence: CTTCGAGGCCAATCATCAAT. Inner Right Sequence: GCCAAAACTATCATGGGCTG. Inner Primer PCR Length: 2904 bp. Deletion Size: 1406 bp. Deletion left flank: ttttattactttgttttatatttcaaaaac. Deletion right flank: atcaagtcgatcttcaaatcgatcaaaagc.|"Made_by: Vancouver KO Group"|"Mutagen:UV/TMP"|"This strain was provided by the C. elegans Reverse Genetics Core Facility at the University of British Columbia, which is part of the international C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use."
Proper citation: RRID:WB-STRAIN:WBStrain00031361 Copy
http://www.wormbase.org/db/get?name=WBStrain00031401
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00012379(Y1A5A.1)
Genomic Alteration: WBGene00012379(Y1A5A.1)
Availability: available
References:
Synonyms: Y1A5A.1(ok414) III.
Notes: Made_by: OMRF Knockout Group|"Mutagen:UV/TMP"|"This strain was provided by the C. elegans Gene Knockout Project at the Oklahoma Medical Research Foundation, which was part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use."|"Y1A5A.1. Homozygous. Outer Left Sequence: aggaagcacagactgggaga. Outer Right Sequence: caaatgcttccgtttccatt. Inner Left Sequence: ctgctcgtgtgtgtgtgttg. Inner Right Sequence: tcgtagcattgatcgtcgtc. Inner primer WT PCR product: 2569."
Proper citation: RRID:WB-STRAIN:WBStrain00031401 Copy
http://www.wormbase.org/db/get?name=WBStrain00031400
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00000195(arr-1)
Genomic Alteration: WBGene00000195(arr-1)
Availability: available
References:
Synonyms: arr-1(ok401) X.
Notes: F53H8.2. Homozygous. Outer Left Sequence: agttttatgccgctctcgaa. Outer Right Sequence: tcaattcgttccccactctc. Inner Left Sequence: caacttttccgccacataca. Inner Right Sequence: atggcggaagtttaccctct. Inner primer WT PCR product: 2402.|"Made_by: OMRF Knockout Group"|"Mutagen:UV/TMP"|"This strain was provided by the C. elegans Gene Knockout Project at the Oklahoma Medical Research Foundation, which was part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use."
Proper citation: RRID:WB-STRAIN:WBStrain00031400 Copy
http://www.wormbase.org/db/get?name=WBStrain00031374
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00001510(fzr-1)
Genomic Alteration: WBGene00001510(fzr-1)
Availability: available
References:
Synonyms: fzr-1(ok380) II.
Notes: Made_by: OMRF Knockout Group|"Mutagen:UV/TMP"|"This strain was provided by the C. elegans Reverse Genetics Core Facility at the University of British Columbia, which is part of the international C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use."|"ZK1307.6. Superficially wild type."
Proper citation: RRID:WB-STRAIN:WBStrain00031374 Copy
http://www.wormbase.org/db/get?name=WBStrain00031372
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00006461(tag-96)
Genomic Alteration: WBGene00006461(tag-96)
Availability: available
References:
Synonyms: tag-96(ok336) IV.
Notes: M01D7.4. Superficially wild type.|"Made_by: OMRF Knockout Group"|"Mutagen:UV/TMP"|"This strain was provided by the C. elegans Reverse Genetics Core Facility at the University of British Columbia, which is part of the international C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use."
Proper citation: RRID:WB-STRAIN:WBStrain00031372 Copy
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