Searching the RRID Resource Information Network
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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Regulation of Gene Expression Ontolology Resource Report Resource Website |
Regulation of Gene Expression Ontolology (RRID:SCR_006124) | REXO | data or information resource, ontology, controlled vocabulary | An application ontology for the domain of gene expression regulation. The ontology integrates fragments of GO and MI with data from GOA, IntAct, UniProt, NCBI, KEGG and orthology relations. | obo | is listed by: BioPortal | nlx_157572 | SCR_006124 | 2026-02-14 02:04:53 | 0 | |||||||||
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Reproductive Trait and Phenotype Ontology Resource Report Resource Website |
Reproductive Trait and Phenotype Ontology (RRID:SCR_006245) | REPO | data or information resource, ontology, controlled vocabulary | Ontology for livestock reproductive traits and phenotypes | owl | is listed by: BioPortal | nlx_157574 | SCR_006245 | 2026-02-14 02:04:53 | 0 | |||||||||
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Student Health Record Ontology Resource Report Resource Website |
Student Health Record Ontology (RRID:SCR_005854) | SHR | data or information resource, ontology, controlled vocabulary | Ontology for the description of student health records. Student health records are created for entering college students in order to provide better health services will be formed. This file contains various sections such as history of disease, family history of disease, public examinations and ... . | owl | is listed by: BioPortal | nlx_157596 | SCR_005854 | SHR-Ontology | 2026-02-14 02:04:29 | 0 | ||||||||
|
Neurobehavior Ontology Resource Report Resource Website 1+ mentions |
Neurobehavior Ontology (RRID:SCR_006201) | NBO | data or information resource, ontology, controlled vocabulary | An ontology consisting of two main components, an ontology of behavioral processes and an ontology of behavioral phenotypes. The behavioral process branch of NBO contains a classification of behavior processes complementing and extending the GO process ontology. The behavior phenotype branch of NBO consists of a classification of both normal and abnormal behavioral characteristics of organisms. The prime application of NBO is to provide the vocabulary that is required to integrate behavior observations within and across species. It is currently being applied by several model organism communities as well as in the description of human behavior-related disease phenotypes. The main ontology is available in both the OBO Flatfile Format and the Web Ontology Language (OWL). | obo, neurobehavior, behavior, phenotype, behavioral process, biology, animal, normal, abnormal, owl, genetics |
is listed by: BioPortal is listed by: OBO is listed by: Google Code is related to: Gene Ontology |
New BSD License, (Code) | nlx_151745 | http://purl.bioontology.org/ontology/NBO http://behavior-ontology.googlecode.com/svn/trunk/behavior.owl http://bioportal.bioontology.org/ontologies/1621 |
SCR_006201 | Neurobehavior Ontology (NBO), Neuro Behavior Ontology, behavior-ontology, Behavioral Ontology | 2026-02-14 02:04:47 | 2 | ||||||
|
Human Developmental Anatomy Ontology timed version Resource Report Resource Website |
Human Developmental Anatomy Ontology timed version (RRID:SCR_010338) | EHDA | data or information resource, ontology, controlled vocabulary | A structured controlled vocabulary of stage-specific anatomical structures of the human. It has been designed to mesh with the mouse anatomy and incorporates each Carnegie stage of development (CS1-20). The timed version of the human developmental anatomy ontology gives all the tissues present at each Carnegie Stage (CS) of human development (1-20) linked by a part-of rule. Each term is mentioned only once so that the embryo at each stage can be seen as the simple sum of its parts. Users should note that tissues that are symmetric (e.g. eyes, ears, limbs) are only mentioned once. | obo | is listed by: BioPortal | nlx_157431 | SCR_010338 | 2026-02-14 02:04:49 | 0 | |||||||||
|
Human Physiology Simulation Ontology Resource Report Resource Website |
Human Physiology Simulation Ontology (RRID:SCR_010340) | HUPSON | data or information resource, ontology, controlled vocabulary | Ontology as a basis for shared semantics and interoperability of simulations, of models, of algorithms and of other resources in this domain. The ontology is based on the Basic Formal Ontology, and adheres to the MIREOT principles. | owl | is listed by: BioPortal | nlx_157434 | SCR_010340 | 2026-02-14 02:04:34 | 0 | |||||||||
|
Logical Observation Identifier Names and Codes Resource Report Resource Website 1+ mentions |
Logical Observation Identifier Names and Codes (RRID:SCR_010341) | LOINC | data or information resource, ontology, controlled vocabulary | Ontology of logical observation identifier names and codes (LOINC); Version 2.26; January 2, 2009 | umls | is listed by: BioPortal | nlx_157460 | SCR_010341 | 2026-02-14 02:04:54 | 1 | |||||||||
|
DICOM Controlled Terminology Resource Report Resource Website |
DICOM Controlled Terminology (RRID:SCR_010302) | DCM | data or information resource, ontology, controlled vocabulary | DICOM Controlled Terminology (PS3.16 2013 Annex D) | owl | is listed by: BioPortal | nlx_157381 | SCR_010302 | 2026-02-14 02:04:34 | 0 | |||||||||
|
Diagnostic Ontology Resource Report Resource Website |
Diagnostic Ontology (RRID:SCR_010307) | DIAGONT | data or information resource, ontology, controlled vocabulary | A computational diagnostic ontology containing 91 elements, including classes and sub-classes, which are required to conduct SR-MA (Systematic Review - Meta Analysis) for diagnostic studies, that will assist in standardized reporting of diagnostic articles. They also report high percentage of agreement among five observers as a result of the inter-observer agreement that they conducted among them to tag 13 articles using the diagnostic ontology. Moreover, they extend their existing repository CERR-N (Center of Excellence in Research Reporting in Neurosurgery) to include diagnostic studies. | owl | is listed by: BioPortal | nlx_157386 | SCR_010307 | 2026-02-14 02:04:54 | 0 | |||||||||
|
Translational Medicine Ontology Resource Report Resource Website |
Translational Medicine Ontology (RRID:SCR_010439) | TMO | data or information resource, ontology, controlled vocabulary | A high level patient-centric ontology for the pharmaceutical industry. The ontology should enable silos in discovery research, hypothesis management, experimental studies, compounds, formulation, drug development, market size, competitive data, population data, etc. to be brought together. This would enable scientists to answer new questions, and to answer existing scientific questions more quickly. This will help pharmaceutical companies to model patient-centric information, which is essential for the tailoring of drugs, and for early detection of compounds that may have sub-optimal safety profiles. The ontology should link to existing publicly available domain ontologies. | owl | is listed by: BioPortal | nlx_157616 | SCR_010439 | 2026-02-14 02:04:54 | 0 | |||||||||
|
BioPortal Metadata Ontology Resource Report Resource Website |
BioPortal Metadata Ontology (RRID:SCR_010167) | BP-METADATA | data or information resource, ontology, controlled vocabulary | Ontology that represents the structure that BioPortal uses to represent all of its metadata (ontology details, mappings, notes, reviews, views) | owl |
is listed by: BioPortal is related to: Provisional Cell Ontology |
nlx_157328 | http://www.bioontology.org/wiki/index.php/BioPortal_Metadata | SCR_010167 | 2026-02-14 02:04:34 | 0 | ||||||||
|
Mathematical Modelling Ontology Resource Report Resource Website |
Mathematical Modelling Ontology (RRID:SCR_000910) | MAMO | data or information resource, ontology, controlled vocabulary | Ontology that is a classification of the types of mathematical models used mostly in the life sciences, their variables, relationships and other relevant features. | owl | is listed by: BioPortal | nlx_157467 | SCR_000910 | 2026-02-14 02:04:50 | 0 | |||||||||
|
Animal Natural History and Life History Ontology Resource Report Resource Website 1+ mentions |
Animal Natural History and Life History Ontology (RRID:SCR_010292) | ADW | data or information resource, ontology, controlled vocabulary | An ontology for animal life history and natural history characteristics suitable for populations and higher taxonomic entities. | owl |
is listed by: BioPortal has parent organization: University of Michigan; Ann Arbor; USA |
nlx_157319 | SCR_010292 | 2026-02-14 02:05:01 | 1 | |||||||||
|
Coding Symbols for a Thesaurus of Adverse Reaction Terms Resource Report Resource Website |
Coding Symbols for a Thesaurus of Adverse Reaction Terms (RRID:SCR_010294) | COSTART | data or information resource, ontology, controlled vocabulary | Ontology for coding, filing, and retrieving post-marketing adverse drug and biologic experience reports. It is organized in body system and pathophysiology hierarchies, as well as a separate fetal/neonatal category of less than 20 terms. COSTART has been superseded by the Medical Dictionary for Regulatory Activities (MedDRA) Terminology. For more information about MedDRA in the Metathesaurus, see the MedDRA source synopsis. COSTART was last updated in the Metathesaurus in 1999. | umls | is listed by: BioPortal | nlx_157367 | SCR_010294 | 2026-02-14 02:04:51 | 0 | |||||||||
|
NCBITaxon Resource Report Resource Website 1+ mentions |
NCBITaxon (RRID:SCR_000479) | NCBITAXON | data or information resource, ontology, controlled vocabulary | Ontology that is an automatic translation of the NCBI taxonomy (a taxonomic classification of living organisms and associated artifacts) database into obo/owl. | owl |
is listed by: BioPortal has parent organization: NCBI Taxonomy |
THIS RESOURCE IS NO LONGER IN SERVICE | nlx_157490 | SCR_000479 | National Center for Biotechnology Information Organismal Classification, National Center for Biotechnology Information (NCBI) Organismal Classification, NCBI Organismal Classification | 2026-02-14 02:05:01 | 4 | |||||||
|
Habronattus Courtship Ontology Resource Report Resource Website |
Habronattus Courtship Ontology (RRID:SCR_010334) | HC | data or information resource, ontology, controlled vocabulary | An ontology for courtship behavior of the spider Habronattus californicus. A demonstration of ontology construction as a general technique for coding ethograms and other descriptions of behavior into machine understandable forms. | protege | is listed by: BioPortal | nlx_157423 | http://www.mesquiteproject.org/ontology/Habronattus/index.html | SCR_010334 | 2026-02-14 02:04:44 | 0 | ||||||||
|
Family Health History Ontology Resource Report Resource Website |
Family Health History Ontology (RRID:SCR_010068) | FHHO | data or information resource, ontology, controlled vocabulary | Ontology that facilitates representing the family health histories of persons related by biological and/or social family relationships (e.g. step, adoptive) who share genetic, behavioral, and/or environmental risk factors for disease. SWRL rules are included to compute 3 generations of biological relationships based on parentage and family history findings based on personal health findings. | owl | is listed by: BioPortal | nlx_157402 | SCR_010068 | 2026-02-14 02:04:50 | 0 | |||||||||
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Dispedia Core Ontology Resource Report Resource Website |
Dispedia Core Ontology (RRID:SCR_010309) | DCO | data or information resource, ontology, controlled vocabulary | Ontology that is a schema for information brokering and knowledge management in the complex field of rare diseases. On the one hand, the Dispedia schema uses semantic technologies to describe patients affected by rare diseases, and on the other hand, to record expertise concerning these particular diseases in machine-processable form. In addition to the differentiated attribution of facts to the individual need for information, Dispedia enables information brokering which adjusts to the type of recipient, its character as well as its personal attitude. The schema was initially geared to an exemplified disease, Amyotrophe Lateralsclerose (ALS). | owl | is listed by: BioPortal | Rare disease, Amyotrophic lateral sclerosis | nlx_157389 | SCR_010309 | 2026-02-14 02:05:06 | 0 | ||||||||
|
Semantic Web for Earth and Environment Technology Ontology Resource Report Resource Website |
Semantic Web for Earth and Environment Technology Ontology (RRID:SCR_010426) | SWEET | data or information resource, ontology, controlled vocabulary | A mature foundational ontology developed at the NASA Jet Propulsion Laboratory, currently containing over 6000 concepts organized in 200 ontologies represented in OWL, whose top level concepts include Representation (math, space, science, time, data), Realm (Ocean, Land Surface, Terrestrial Hydroshere, Atmosphere, etc.), Phenomena (macro-scale ecological and physical), Processes (micro-scale physical, biological, chemical, and mathematical), Human Activities (Decision, Commerce, Jurisdiction, Environmental, Research). SWEET is now officially under the governance of the ESIP foundation. | owl | is listed by: BioPortal | nlx_157585 | SCR_010426 | 2026-02-14 02:05:02 | 0 | |||||||||
|
Systems Chemical Biology and Chemogenomics Ontology Resource Report Resource Website |
Systems Chemical Biology and Chemogenomics Ontology (RRID:SCR_003928) | CHEMBIO | data or information resource, ontology, controlled vocabulary | Ontology for Systems Chemical Biology and Chemogenomics | owl | is listed by: BioPortal | nlx_157605 | SCR_003928 | 2026-02-14 02:04:44 | 0 |
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