Searching the RRID Resource Information Network
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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Translational Polycystic Kidney Disease (PKD) Center at Mayo Clinic Rochester Resource Report Resource Website |
Translational Polycystic Kidney Disease (PKD) Center at Mayo Clinic Rochester (RRID:SCR_015313) | access service resource, resource, topical portal, portal, service resource, data or information resource, disease-related portal | Center that concentrates on the common, adult form of the disease, autosomal dominant PKD (ADPKD). The services provided focus on understanding the genetic basis of disease, more accurately monitoring disease progression and improving prognostics, and employing model systems to explore pathogenesis and conduct preclinical testing. | polycystic kidney disease, pathogenesis, preclinical testing |
is listed by: NIDDK Information Network (dkNET) has parent organization: Mayo Clinic Minnesota; Minnesota; USA is parent organization of: Translational Polycystic Kidney Disease (PKD) Center at Mayo Clinic Rochester Model Systems Core is parent organization of: Translational Polycystic Kidney Disease (PKD) Center at Mayo Clinic Rochester Human Imaging Core is parent organization of: Translational Polycystic Kidney Disease (PKD) Center at Mayo Clinic Rochester Molecular Genetics and Biomarker Core has organization facet: Translational Polycystic Kidney Disease (PKD) Center at Mayo Clinic Rochester Human Imaging Core has organization facet: Translational Polycystic Kidney Disease (PKD) Center at Mayo Clinic Rochester Model Systems Core has organization facet: Translational Polycystic Kidney Disease (PKD) Center at Mayo Clinic Rochester Molecular Genetics and Biomarker Core |
Polycystic Kidney Disease | NIDDK P30DK090728 | Available to the research community | SCR_015313 | 2026-02-16 09:48:46 | 0 | ||||||||
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Indiana O'Brien Center for Advanced Microscopic Analysis Resource Report Resource Website |
Indiana O'Brien Center for Advanced Microscopic Analysis (RRID:SCR_015271) | access service resource, resource, topical portal, portal, service resource, data or information resource, disease-related portal | Imaging center which provides renal and urological researchers access to intravital optical microscopy and 3-dimensional quantitative digital image analysis. | kidney imaging center, kidney imaging analysis, microscopy center, microscopic analysis center |
is listed by: NIDDK Information Network (dkNET) has parent organization: Indiana University School of Medicine; Indiana; USA is parent organization of: Indiana O'Brien Center for Advanced Microscopic Analysis Biosensor Development Core is parent organization of: Indiana O'Brien Center for Advanced Microscopic Analysis Administration Core is parent organization of: Indiana O'Brien Center for Advanced Microscopic Analysis Digital Image Analysis Core is parent organization of: Indiana O'Brien Center for Advanced Microscopic Analysis Education Core is parent organization of: Indiana O'Brien Center for Advanced Microscopic Analysis Probe Delivery Core is parent organization of: Indiana O'Brien Center for Advanced Microscopic Analysis Intravital Microscopy Core has organization facet: Indiana O'Brien Center for Advanced Microscopic Analysis Intravital Microscopy Core has organization facet: Indiana O'Brien Center for Advanced Microscopic Analysis Digital Image Analysis Core has organization facet: Indiana O'Brien Center for Advanced Microscopic Analysis Probe Delivery Core has organization facet: Indiana O'Brien Center for Advanced Microscopic Analysis Biosensor Development Core has organization facet: Indiana O'Brien Center for Advanced Microscopic Analysis Education Core has organization facet: Indiana O'Brien Center for Advanced Microscopic Analysis Administration Core is organization facet of: O'Brien Kidney Centers |
NIDDK P30DK079312 | Available to the research community | SCR_015271 | 2026-02-16 09:48:45 | 0 | |||||||||
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Gregory Fleming James Cystic Fibrosis Research Center Resource Report Resource Website |
Gregory Fleming James Cystic Fibrosis Research Center (RRID:SCR_015392) | access service resource, resource, topical portal, portal, service resource, data or information resource, disease-related portal | Research center that maintains core facilities available for studies of cell biology, ion transport, and translational aspects of cystic fibrosis research. | cystic fibrosis foundation, ion transport, cell biology, cystic fibrosis research center |
is listed by: NIDDK Information Network (dkNET) has parent organization: University of Alabama at Birmingham School of Medicine; Alabama; USA is parent organization of: Gregory Fleming James Cystic Fibrosis Research Center Assay Core is parent organization of: Gregory Fleming James Cystic Fibrosis Research Center Cystic Fibrosis Clinical and Translational Core is parent organization of: Gregory Fleming James Cystic Fibrosis Research Center Cystic Fibrosis Transmembrane Conductance Regulator Expression Core is parent organization of: Gregory Fleming James Cystic Fibrosis Research Center Cystic Fibrosis Animal Models Core is parent organization of: Gregory Fleming James Cystic Fibrosis Research Center Cell Model and Evaluation Core has organization facet: Gregory Fleming James Cystic Fibrosis Research Center Assay Core has organization facet: Gregory Fleming James Cystic Fibrosis Research Center Cell Model and Evaluation Core has organization facet: Gregory Fleming James Cystic Fibrosis Research Center Cystic Fibrosis Animal Models Core has organization facet: Gregory Fleming James Cystic Fibrosis Research Center Cystic Fibrosis Clinical and Translational Core has organization facet: Gregory Fleming James Cystic Fibrosis Research Center Cystic Fibrosis Transmembrane Conductance Regulator Expression Core is organization facet of: Cystic Fibrosis Research and Translation Centers |
Cystic Fibrosis | NIDDK P30DK072482; Cystic Fibrosis Foundation |
Available to the research community | SCR_015392 | 2026-02-16 09:48:54 | 0 | ||||||||
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Cystic Fibrosis Center - University of Washington Resource Report Resource Website |
Cystic Fibrosis Center - University of Washington (RRID:SCR_015401) | access service resource, resource, topical portal, portal, service resource, data or information resource, disease-related portal | Research center that aims to provide resources and expertise to expedite development of potential new therapeutic approaches to correct dysfunctional CFTR and its secondary consequences, enhance understanding of evolving bacterial ecosystems and resultant host response in CF gastrointestinal and respiratory tracts, and how these interactions impact health. It also aims to develop improved assays, new drug screening assays, biomarkers and improved clinical outcome measures, as well as to better understand the metabolic and inflammatory consequences of CFTR dysfunction. | cftr therapy, cystic fibrosis translational research, cftr dysfunction |
is listed by: NIDDK Information Network (dkNET) has parent organization: University of Washington; Seattle; USA is parent organization of: Cystic Fibrosis Center - University of Washington Administrative and Enrichment Core is parent organization of: Cystic Fibrosis Center - University of Washington Host Response Core is parent organization of: University of Washington Genomics Core Cystic Fibrosis Research Translation Center and Research Development Program is parent organization of: Cystic Fibrosis Center - University of Washington Microbiology Core is parent organization of: Cystic Fibrosis Center - University of Washington Clinical Core has organization facet: Cystic Fibrosis Center - University of Washington Clinical Core has organization facet: Cystic Fibrosis Center - University of Washington Microbiology Core has organization facet: University of Washington Genomics Core Cystic Fibrosis Research Translation Center and Research Development Program has organization facet: Cystic Fibrosis Center - University of Washington Host Response Core has organization facet: Cystic Fibrosis Center - University of Washington Administrative and Enrichment Core is organization facet of: Cystic Fibrosis Research and Translation Centers |
Cystic Fibrosis | NIDDK P30DK089507 | Available to the research community | SCR_015401 | 2026-02-16 09:48:47 | 0 | ||||||||
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MMPC-University of Michigan Medical School Resource Report Resource Website 1+ mentions |
MMPC-University of Michigan Medical School (RRID:SCR_015373) | access service resource, resource, topical portal, portal, service resource, data or information resource, disease-related portal | Research center which aims to contribute to a national database of metabolic phenotyping data in wild-type mouse strains and a broad range of mouse models relevant to the pathogenesis and treatment of diabetes, obesity and associated metabolic disorders. It also aims to foster continued technical development, refinement of assay sensitivity and specificity, data reproducibility, and transmission of best research practices within the areas of fundamental and applied diabetes and obesity research. | diabetes research center, obesity research center, mouse model research |
is listed by: NIDDK Information Network (dkNET) has parent organization: National Mouse Metabolic Phenotyping Centers has parent organization: University of Michigan; Ann Arbor; USA is parent organization of: MMPC-University of Michigan Medical School Microbiome Core is parent organization of: MMPC-University of Michigan Medical School Microvascular Complications Core is parent organization of: MMPC-University of Michigan Medical School Metabolism Bariatric Surgery and Behavior Core is parent organization of: MMPC-University of Michigan Medical School Animal Care and Germ-Free Mouse Core has organization facet: MMPC-University of Michigan Medical School Microbiome Core has organization facet: MMPC-University of Michigan Medical School Animal Care and Germ-Free Mouse Core has organization facet: MMPC-University of Michigan Medical School Metabolism Bariatric Surgery and Behavior Core has organization facet: MMPC-University of Michigan Medical School Microvascular Complications Core is organization facet of: National Mouse Metabolic Phenotyping Centers |
NIDDK U2C-DK110768 | Available to the research community, Acknowledgement requested | SCR_015373 | 2026-02-16 09:48:47 | 1 | |||||||||
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Stanford Diabetes Research Center Resource Report Resource Website 1+ mentions |
Stanford Diabetes Research Center (RRID:SCR_015856) | service resource, access service resource | University-affiliated center that promotes research in diabetes and related metabolic and endocrine disorders at Stanford University. | stanford, diabetes, research center, niddk, service resource |
is listed by: NIDDK Information Network (dkNET) is listed by: Diabetes Research Centers has organization facet: Stanford Diabetes Research Center Diabetes Immune Monitoring Core has organization facet: Stanford Diabetes Research Center Stanford Islet Research Core has organization facet: Stanford Diabetes Research Center Diabetes Clinical and Translational Core has organization facet: Stanford Diabetes Research Center Diabetes Genomics Analysis Core is organization facet of: Diabetes Research Centers |
NIDDK P30 DK116074 | Available to the scientific community | SCR_015856 | 2026-02-16 09:48:53 | 1 | |||||||||
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University of Pennsylvania Diabetes Research Center Resource Report Resource Website 1+ mentions |
University of Pennsylvania Diabetes Research Center (RRID:SCR_015732) | DRC | data or information resource, topical portal, disease-related portal, portal | NIDDK center that serves diabetes-oriented investigators from University of Pennsylvania as well as additional institutions from the mid-Atlantic region. The Penn DRC represents many basic science and clinical departments at Penn and the other institutions, and supports research in diabetes and obesity via Scientific Cores, a Pilot and Feasibility Grant Program, and a series of seminars, retreats, and other academic enrichment activities. | diabetes, research, univeristy of pennsylvania, upenn, obesity, metabolic disorder | is listed by: NIDDK Information Network (dkNET) | NIDDK P30DK19525 | Available to affiliated researchers | http://www.med.upenn.edu/ https://diabetescenters.org/ |
SCR_015732 | 2026-02-16 09:48:52 | 1 | |||||||
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BioPlex Resource Report Resource Website 1000+ mentions |
BioPlex (RRID:SCR_016144) | data repository, database, storage service resource, service resource, data or information resource | Database of cell lines with each expressing a tagged version of a protein from the ORFeome collection. The overarching project goal is to determine protein interactions for every member of the collection. | cell, line, protein, immunopurification, mass, spectrometry, interaction, bio.tools, FASEB list |
is listed by: bio.tools is listed by: Debian has parent organization: Harvard Medical School; Massachusetts; USA |
NHGRI U41HG006673; NIDDK K01 DK098285; Canadian Institutes for Health Research |
PMID:28514442 | biotools:bioplex_2.0 | https://bio.tools/bioplex_2.0 | SCR_016144 | BioPlex (biophysical interactions of ORFeome-based complexes), Harvard BioPlex, Biophysical Interactions of Orfeome-based comPLEXes (BioPLEX) | 2026-02-16 09:48:58 | 1355 | ||||||
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HIRN Coordinating Center Resource Report Resource Website |
HIRN Coordinating Center (RRID:SCR_016395) | HIRN CC, HIRNCC | data or information resource, organization portal, consortium, portal | Consortium that provides infrastructure to promote communication and collaboration among current and future HIRN participants, facilitating scientific advances and the sharing of data, tools, and reagents among HIRN members and the research community at large. | coordination, hirn, human, islet, research, center, administration | is organization facet of: Human Islet Research Network (HIRN) | NIDDK U01 DK104162 | SCR_016395 | Human Islet Research Center Coordinating Center | 2026-02-16 09:49:01 | 0 | ||||||||
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HIRN Consortium on Targeting and Regeneration Resource Report Resource Website |
HIRN Consortium on Targeting and Regeneration (RRID:SCR_016201) | HIRN-CTAR, CTAR, CTR, HIRN-CTR | data or information resource, organization portal, consortium, portal | Consortium that is an independent research initiative of the Human Research Information Network (HIRN). It is investigating methods to increase or maintain functional beta cell mass in T1D through targeted manipulation of islet plasticity or engineered protection of beta cells from immune-mediated destruction. | plasticity, bioengineering, cell, beta, cell, death | is organization facet of: Human Islet Research Network (HIRN) | NIDDK ; NIDDK U01 DK104162; NIDDK UC4 DK104211; NIDDK UC4 DK104204; NIDDK UC4 DK104209; NIDDK UC4 DK104143; NIDDK UC4 DK104119; NIDDK UC4 DK116241; NIDDK UC4 DK116264; NIDDK UC4 DK116252; NIDDK UC4 DK116255; NIDDK UC4 DK116280 |
SCR_016201 | Consortium on Targeting and Regeneration (HIRN-CTAR) | 2026-02-16 09:48:58 | 0 | ||||||||
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HIRN Consortium on Human Islet Biomimetics Resource Report Resource Website |
HIRN Consortium on Human Islet Biomimetics (RRID:SCR_016199) | HIRN-CHIB, CHIB | data or information resource, organization portal, consortium, portal | Consortium that is an independent research initiative of the Human Research Information Network (HIRN). It is combining advances in beta cell biology and cell biology with tissue engineering technologies to develop microdevices that support functional human islets. | beta, cell, biology, tissue, bioengineering, nanoengineering, human, stem | is organization facet of: Human Islet Research Network (HIRN) | NIDDK ; NIDDK U01 DK104162; NIDDK UC4 DK104208; NIDDK UC4 DK104196; NIDDK UC4 DK104202; NIDDK UC4 DK104165; NIDDK UC4 DK116283 |
SCR_016199 | Consortium on Human Islet Biomimetics (HIRN-CHIB) | 2026-02-16 09:49:00 | 0 | ||||||||
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HIRN Consortium on Beta Cell Death and Survival Resource Report Resource Website |
HIRN Consortium on Beta Cell Death and Survival (RRID:SCR_016198) | HIRN-CBDS, CBDS | data or information resource, organization portal, consortium, portal | Consortium that is an independent research initiative of the Human Research Information Network (HIRN). It is using human tissues to discover highly specific biomarkers of beta cell injury in asymptomatic T1D and developing strategies to stop beta cell destruction early in the disease process. | kidney, tissue, biomarker, beta, cell, t1d, disease, research | is organization facet of: Human Islet Research Network (HIRN) | NIDDK ; NIDDK U01 DK104162; NIDDK UC4 DK104205; NIDDK UC4 DK104155; NIDDK UC4 DK104167; NIDDK UC4 DK104166; NIDDK UC4 DK104159; NIDDK UC4 DK104216; NIDDK UC4 DK108132; NIDDK UC4 DK108101; NIDDK UC4 DK108120; NIDDK UC4 DK116274; NIDDK UC4 DK116278; NIDDK UC4 DK116271 |
SCR_016198 | Consortium on Beta Cell Death and Survival (HIRN-CBDS) | 2026-02-16 09:48:58 | 0 | ||||||||
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RNA22 Resource Report Resource Website 100+ mentions |
RNA22 (RRID:SCR_016507) | RNA22 | software application, data processing software, sequence analysis software, data analysis software, software resource | Software tool as a pattern based algorithm for detecting microRNA binding sites and their corresponding microRNA and mRNA complexes. Allows interactive exploration and visualization of miRNA target predictions. Permits link-out to external expression repositories and databases. | pattern, based, detecting, microRNA, binding, site, complex, sequence, genome, analysis, FASEB list | is listed by: OMICtools | A Star ; Singapore ; NIDDK DK04763; NIH AI54973 |
Free, Available for download, Freely available | SCR_016507 | RiboNucleic Acid 22 | 2026-02-16 09:49:02 | 192 | |||||||
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TopDom Resource Report Resource Website 10+ mentions |
TopDom (RRID:SCR_016964) | TOPDOM | software application, data processing software, software toolkit, data analysis software, software resource | Software tool to identify Topological Domains, which are basic builiding blocks of genome structure. Detects topological domains in a linear time., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025. | identify, topological, domain, genome, structure, linear, time, data, analysis |
has parent organization: University of Southern California; Los Angeles; USA works with: CCTOP |
NHLBI U01 HL108634; NIDDK U54 DK107981; NSF CAREER 0747475; NSF CAREER 1150287; Arnold and Mabel Beckman foundation ; Pew Charitable Trusts |
PMID:26704975 | THIS RESOURCE IS NO LONGER IN SERVICE | SCR_016964 | TOPological DOMains, Topological Domains, TopDom_v0.0.2, TopDom_v0.0.1 | 2026-02-16 09:49:08 | 10 | ||||||
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Prevention of Lower Urinary Tract Symptoms Resource Report Resource Website |
Prevention of Lower Urinary Tract Symptoms (RRID:SCR_016923) | PLUS | data or information resource, organization portal, consortium, portal | Research consortium from many different fields to plan, perform and analyze the studies that are needed to help researchers conduct future prevention and intervention for Lower Urinary Tract Symptoms (LUTS) in women. | plan, perform, analyze, data, prevent, lower, urinary, track, symptom, women |
is listed by: NIDDK Information Network (dkNET) is listed by: Collaborating for the Advancement of Interdisciplinary Research in Benign Urology is related to: University of Minnesota Medical School; Minnesota; USA |
NIDDK | SCR_016923 | Prevention of Lower Urinary Tract Symptoms, Prevention LUTS, PLUS | 2026-02-16 09:49:07 | 0 | ||||||||
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Kidney Precision Medicine Project Resource Report Resource Website 50+ mentions |
Kidney Precision Medicine Project (RRID:SCR_016920) | KPMP | the community can contribute to this resource, availability annotation standard, nif annotation standard, organization portal, narrative resource, project portal, topical portal, consortium, portal, data or information resource, standard specification, disease-related portal | Project to ethically obtain and evaluate human kidney biopsies from participants with Acute Kidney Injury (AKI) or Chronic Kidney Disease (CKD), create a kidney tissue atlas, define disease subgroups, and identify critical cells, pathways, and targets for novel therapies. Used to develop the next generation of software tools to visualize and understand the various components of kidney diseases and to optimize data collection. Multi site collaboration comprised of patients, clinicians, and investigators from across the United States. | ethically, obtain, evaluate, human, kidney, biopsy, collaboration, patient, clinician, researcher, acute, injury, chronic, disease, tissue, atlas, cell, pathway, target, novel, therapy, data, collection |
is listed by: NIDDK Information Network (dkNET) is related to: Kidney Tissue Atlas |
Acute Kidney Injury, Chronic Kidney Disease | NIDDK | Open resource for academics, industry, and the broader scientific community | SCR_016920 | Kidney Precision Medicine Project, The Kidney Precision Medicine Project | 2026-02-16 09:49:07 | 53 | ||||||
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PICRUSt Resource Report Resource Website 10+ mentions |
PICRUSt (RRID:SCR_016855) | PICRUSt | software application, software resource, simulation software | Software package to predict metagenome functional content from marker gene (e.g., 16S rRNA) surveys and full genomes. Used to predict which gene families are present and then combines gene families to estimate the composite metagenome. | predict, metagenome, functional, content, DNA, sample, marker, gene, sequence, data, microbiome, 16S, RNA | is related to: PICRUSt2 | Canadian Institutes of Health Research ; Canada Research Chairs program ; Howard Hughes Medical Institute ; NIDDK P01 DK078669; NHGRI U01 HG004866; NHGRI R01 HG004872; Crohn’s and Colitis Foundation of America ; Sloan Foundation ; NHGRI R01 HG005969; NSF CAREER DBI1053486; ARO W911NF1110473 |
PMID:23975157 | Free, Available for download, Freely available | SCR_016856 | SCR_016855 | Phylogenetic Investigation of Communities by Reconstruction of Unobserved States, PICRUSt | 2026-02-16 09:49:06 | 36 | |||||
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ImmuneDB Resource Report Resource Website 1+ mentions |
ImmuneDB (RRID:SCR_017125) | data analysis service, analysis service resource, database, production service resource, service resource, data or information resource | Software system for storing and analyzing high throughput B and T cell immune receptor sequencing data. Comprised of web interface and of Python analysis tools to process raw reads for gene usage, infer clones, aggregate data, and run downstream analyses, or in conjunction with other AIRR tools using its import and export features. | collect, store, analysis, B cell, T cell, immune, receptor, sequencing, data, process, raw, read | is used by: AIRR Data Commons | NIAID P01 AI106697; NIAID P30 AI0450080; NIDDK UC4 DK112217; NCI P30 CA016520 |
PMID:30298069 | Free, Available for download, Freely available | https://github.com/arosenfeld/immunedb | SCR_017125 | 2026-02-16 09:49:10 | 8 | |||||||
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CATALYST Resource Report Resource Website 100+ mentions |
CATALYST (RRID:SCR_017127) | software application, data processing software, software toolkit, data analysis software, software resource | Software R package to provide pipeline for preprocessing of cytometry data, including normalization using bead standards, single cell deconvolution, and bead based compensation. | preprocessing, cytometry, data, normalization, bead, standard, single, cell, deconvulsion, compensation, bio.tools |
uses: CATALYSTLite is listed by: Bioconductor is listed by: bio.tools is listed by: Debian |
Swiss National Science Foundation ; SNSF Assistant Professorship grant ; PhosphonetPPM and MetastasiX SystemsX grant ; NIDDK UC4 DK108132; European Research Council ; Roche Postdoctoral Fellowship |
PMID:29605184 | Free, Available for download, Freely available | biotools:catalyst | https://github.com/HelenaLC/CATALYST https://bio.tools/catalyst |
SCR_017127 | Cytometry dATa anALYSis Tools | 2026-02-16 09:49:10 | 223 | |||||
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exRNA Atlas Resource Report Resource Website 10+ mentions |
exRNA Atlas (RRID:SCR_017221) | application programming interface, controlled vocabulary, organization portal, data analysis service, analysis service resource, data access protocol, atlas, ontology, data repository, software resource, database, storage service resource, expression atlas, consortium, portal, production service resource, service resource, data or information resource | Software tool as data and metadata repository of Extracellular RNA Communication Consortium. Atlas includes small RNA sequencing and qPCR derived exRNA profiles from human and mouse biofluids. All RNAseq datasets are processed using version 4 of exceRpt small RNAseq pipeline. Atlas accepts submissions for RNAseq or qPCR data. | Differential, expression, RNA, sequencing, qPCR, data, visualization, extracellular, exRNA, atlas, repository, dataset |
is recommended by: National Library of Medicine has parent organization: Baylor College of Medicine; Houston; Texas has parent organization: exRNA |
gastric cancer, colon carcinoma, colorectal cancer, prostate carcinoma, pancreatic carcinoma, multiple sclerosis, glioblastoma multiforme, ulcerative colitis, Alzheimer's disease, ischemic stroke, intraparenchymal hemorrhage of brain, asthma, cardiovascular disorder, myocardial infarction, lupus, nephrotic syndrome, transplanted kidney present, liver disease, transplanted liver present, pre-eclampsia, Parkinson disease, intraventricular brain hemorrhage, subarachnoid hemorrhage | NIDA U54 DA036134; NCI R01 CA163849; NIGMS R25 GM056929; NCATS UH3 TR000906; NCI U19 CA179512; NIDDK P30 DK63720; NHLBI K23 HL127099; NHLBI R01 HL136685; NIA R01 AG059729; NCATS UH3 TR000943; NCI R35 CA209904; NCI CA217685; NHLBI R01 HL122547; American Cancer Society ResearchProfessor Award ; Frank McGraw Memorial Chair in CancerResearch |
PMID:30951672 | Restricted | SCR_017221 | 2026-02-16 09:49:11 | 24 |
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