Searching the RRID Resource Information Network
SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.
| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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SenseLab Resource Report Resource Website 10+ mentions |
SenseLab (RRID:SCR_007276) | SenseLab | data or information resource, portal, database, organization portal | The SenseLab Project is a long-term effort to build integrated, multidisciplinary models of neurons and neural systems. It was founded in 1993 as part of the original Human Brain Project, which began the development of neuroinformatics tools in support of neuroscience research. It is now part of the Neuroscience Information Framework (NIF) and the International Neuroinformatics Coordinating Facility (INCF). The SenseLab project involves novel informatics approaches to constructing databases and database tools for collecting and analyzing neuroscience information, using the olfactory system as a model, with extension to other brain systems. SenseLab contains seven related databases that support experimental and theoretical research on the membrane properties: CellPropDB, NeuronDB, ModelDB, ORDB, OdorDB, OdorMapDB, BrainPharmA pilot Web portal that successfully integrates multidisciplinary neurocience data. | neuron, model, olfactory system, brain, disease, neuronal, olfactory |
is related to: Neuroscience Information Framework is related to: International Neuroinformatics Coordinating Facility has parent organization: Yale University; Connecticut; USA is parent organization of: SimToolDB |
Aging | Human Brain Project ; Multidisciplinary University Research Initiative ; NIMH ; NIA ; NICD ; NINDS ; NIDCD RO1 DC 009977 |
nif-0000-00017 | SCR_007276 | SenseLab Project, The SenseLab Project | 2026-02-17 10:01:13 | 41 | ||||||
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TrakEM2 Resource Report Resource Website 100+ mentions |
TrakEM2 (RRID:SCR_008954) | TrakEM2 | image analysis software, software application, data processing software, software resource | An ImageJ plugin for morphological data mining, three-dimensional modeling and image stitching, registration, editing and annotation. Two independent modalities exist: either XML-based projects, working directly with the file system, or database-based projects, working on top of a local or remote PostgreSQL database. What can you do with it? * Semantic segmentation editor: order segmentations in tree hierarchies, whose template is exportable for reuse in other, comparable projects. * Model, visualize and export 3D. * Work from your laptop on your huge, remote image storage. * Work with an endless number of images, limited only by the hard drive capacity. Dozens of formats supported thanks to LOCI Bioformats and ImageJ. * Import stacks and even entire grids (montages) of images, automatically stitch them together and homogenize their histograms for best montaging quality. * Add layers conveniently. A layer represents, for example, one 50 nm section (for TEM) or a confocal section. Each layer has its own Z coordinate and thickness, and contains images, labels, areas, nodes of 3d skeletons, profiles... * Insert layer sets into layers: so your electron microscopy serial sections can live inside your optical microscopy sections. * Run any ImageJ plugin on any image. * Measure everything: areas, volumes, pixel intensities, etc. using both built-in data structures and segmentation types, and standard ImageJ ROIs. And with double dissectors! * Visualize RGB color channels changing the opacity of each on the fly, non-destructively. * Annotate images non-destructively with floating text labels, which you can rotate/scale on the fly and display in any color. * Montage/register/stitch/blend images manually with transparencies, semiautomatically, or fully automatically within and across sections, with translation, rigid, similarity and affine models with automatically extracted SIFT features. * Correct the lens distortion present in the images, like those generated in transmission electron microscopy. * Add alpha masks to images using ROIs, for example to split images in two or more parts, or to remove the borders of an image or collection of images. * Model neuronal arbors with 3D skeletons (with areas or radiuses), and synapses with connectors. * Undo all steps. And much more... | java, imagej plugin, neuronal circuit, reconstruction, electron microscopy, optical image volume, arbor, synapse, image, align, register, FASEB list |
is listed by: 3DVC is related to: Segmented ssTEM stack of neural tissue is related to: ImageJ has parent organization: University of Zurich; Zurich; Switzerland |
Swiss National Science Foundation 31003A_132969; NINDS 1-R01 NS054814-05 |
PMID:22723842 PMID:20957184 |
If your work uses TrakEM2 or its associated image registration libraries, Please cite. | nlx_151924 | SCR_008954 | 2026-02-17 10:01:11 | 330 | ||||||
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Brain Computer Interface 2000 Software Package Resource Report Resource Website 100+ mentions |
Brain Computer Interface 2000 Software Package (RRID:SCR_007346) | software application, data processing software, software resource | BCI2000 is a general-purpose system for brain-computer interface (BCI) and adaptive neurotechnology research. It can also be used for data acquisition, stimulus presentation, and brain monitoring applications. The mission of the BCI2000 project is to facilitate research and applications in the areas described. Their vision is that BCI2000 will become a widely used software tool for diverse areas of real-time biosignal processing. In order to achieve this vision, BCI2000 system is available for free for non-profit research and educational purposes. BCI2000 supports a variety of data acquisition systems, brain signals, and study/feedback paradigms. During operation, BCI2000 stores data in a common format (BCI2000 native or GDF), along with all relevant event markers and information about system configuration. BCI2000 also includes several tools for data import/conversion (e.g., a routine to load BCI2000 data files directly into Matlab) and export facilities into ASCII. BCI2000 also facilitates interactions with other software. For example, Matlab scripts can be executed in real-time from within BCI2000, or BCI2000 filters can be compiled to execute as stand-alone programs. Furthermore, a simple network-based interface allows for interactions with external programs written in any programming language. For example, a robotic arm application that is external to BCI2000 may be controlled in real time based on brain signals processed by BCI2000, or BCI2000 may use and store along with brain signals behavioral-based inputs such as eye-tracker coordinates. Because it is based on a framework whose services can support any BCI implementation, the use of BCI2000 provides maximum benefit to comprehensive research programs that operate multiple BCI2000 installations to collect data for a variety of studies. The most important benefits of the system in such situations are: - A Proven Solution - Facilitates Operation of Research Programs - Facilitates Deployment in Multiple Sites - Cross-Platform and Cross-Compiler Compatibility - Open Resource Sponsors: BCI2000 development is sponsored by NIH/NIBIB R01 and NIH/NINDS U24 grants. Keywords: General, Purpose, Systems, Brain, Computer, Interface, Research, Application, Brain, Diverse, Educational, Laboratory, Software, Network, Signals, Behavioral, Eye, Tracker, |
is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) has parent organization: National Institutes of Health |
NIBIB R01 EB026439; NINDS U24 NS109103; NIBIB P41 EB018783 |
nif-0000-00251 | http://www.nitrc.org/projects/bci2000 http://www.bci2000.org https://www.neurotechcenter.org/software |
SCR_007346 | BCI2000 | 2026-02-17 10:01:02 | 166 | ||||||||
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Mouse Thalamic Projectome Dataset Resource Report Resource Website |
Mouse Thalamic Projectome Dataset (RRID:SCR_015702) | data or information resource, data set | Data set of thalamo-centric mesoscopic projection maps to the cortex and striatum. The maps are established through two-color, viral (rAAV)-based tracing images and high throughout imaging. | jpeg image data set, projection map, thalamocortical map, viral (rAAV)-based tracing, thalamo-centric mesoscopic projection map | NIH DP2 OD008425; NINDS R01 NS081071; NIDDK T32 DK007680; NINDS P30 NS069305; NIDA R01 DA008163; NINDS U01 NS094247 |
PMID:25086607 PMID:27892854 |
Free | https://github.com/BJHunnicutt/anatomy | SCR_015702 | 2026-02-17 10:03:08 | 0 | ||||||||
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Virtual NeuroMorphology Electronic Database Resource Report Resource Website 1+ mentions |
Virtual NeuroMorphology Electronic Database (RRID:SCR_007118) | data or information resource, data set | A database of virtually generated anatomically plausible neurons for several morphological classes, including cerebellar Purkinje cells, hippocampal pyramidal and granule cells, and spinal cord motoneurons. It presently contains 542 cells. In the trade neurons collection the database contains an amaral cell archive, neuron morpho reconstructions, and mouse alpha motoneurons. Their collection of generated neurons include motoneurons, Purkinje cells, and hippocampal pyramidal cells. | neuron, morphology, computational neuroanatomy, neuroanatomy, neuronal reconstruction, neuron model, purkinje cell, motor neuron, ca1, ca3, hippocampal pyramidal cell, axon, hippocampus, triceps surae | has parent organization: George Mason University; Virginia; USA | Human Brain Project ; NINDS R01-NS39600-01 |
Acknowledgement requested | nif-0000-10546 | http://krasnow.gmu.edu/cn3/L-Neuron/database/ http://krasnow1.gmu.edu/L-Neuron/L-Neuron/database/ | SCR_007118 | LN Database, L-Neuron Database | 2026-02-17 10:01:03 | 1 | ||||||
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NINDS Repository Resource Report Resource Website 1+ mentions |
NINDS Repository (RRID:SCR_004520) | biomaterial supply resource, material resource | Open resource of biological samples (DNA, cell lines, and other biospecimens) and corresponding phenotypic data to promote neurological research. Samples from more than 34,000 unique individuals with cerebrovascular disease, dystonia, epilepsy, Huntington's Disease, motor neuron disease, Parkinsonism, and Tourette Syndrome, as well as controls (population control and unaffected relatives) have been collected. The mission of the NINDS Repository is to provide 1) genetics support for scientists investigating pathogenesis in the central and peripheral nervous systems through submissions and distribution; 2) information support for patients, families, and advocates concerned with the living-side of neurological disease and stroke. | nervous system disorder, neurogenetics, genetic, clinical data, cerebrovascular disease, epilepsy, motor neuron disease, parkinson's disease, parkinsonism, tourette's disorder, normal control, stroke, amyotrophic lateral sclerosis, huntington's disease, dystonia, dementia, neurologically normal, blood, dna, biomarker, plasma, urine, cell line, induced pluripotent stem cell, fibroblast, stem cell, frozen, lymphoblast, biospecimen banking, biospecimen processing, biospecimen distribution, biospecimen, genetics, phenotype, neurological disease |
is listed by: One Mind Biospecimen Bank Listing is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) is related to: PD-DOC is related to: Parkinson’s Disease Biomarkers Program Data Management Resource (PDBP DMR) has parent organization: Coriell Cell Repositories |
Cerebrovascular disease, Epilepsy, Motor neuron disease, Parkinson's disease, Tourette's Disorder, Normal control, Stroke, Amyotrophic Lateral Sclerosis, Huntington's disease, Dystonia, Dementia, Neurologically normal, Neurological disorder | NINDS ; NIH Blueprint for Neuroscience Research |
Public | nlx_143800 | SCR_004520 | NINDS Human Genetics DNA Cell Line Repository, NINDS Human Genetics DNA and Cell Line Repository, The NINDS Repository, The NINDS Human Genetics Resource Center, The NINDS Human Genetics DNA and Cell Line Repository | 2026-02-17 10:00:18 | 3 | ||||||
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TRACULA Resource Report Resource Website 10+ mentions |
TRACULA (RRID:SCR_013152) | TRACULA | software application, data processing software, software resource | Software tool developed for automatically reconstructing a set of major white matter pathways in the brain from diffusion weighted images using probabilistic tractography. This method utilizes prior information on the anatomy of the pathways from a set of training subjects. By incorporating this prior knowledge in the reconstruction procedure, our method obviates the need for manual intervention with the tract solutions at a later stage and thus facilitates the application of tractography to large studies. The trac-all script is used to preprocess raw diffusion data (correcting for eddy current distortion and B0 field inhomogenities), register them to common spaces, model and reconstruct major white matter pathways (included in the atlas) without any manual intervention. trac-all may be used to execute all the above steps or parts of it depending on the dataset and user''''s preference for analyzing diffusion data. Alternatively, scripts exist to execute chunks of each processing pipeline, and individual commands may be run to execute a single processing step. To explore all the options in running trac-all please refer to the trac-all wiki. In order to use this script to reconstruct tracts in Diffusion images, all the subjects in the dataset must have Freesurfer Recons. | tractography, white matter tract, white matter pathway, diffusion weighted image, diffusion magnetic resonance imaging, white matter, brain, reconstruct, diffusion tensor imaging |
is related to: FreeSurfer has parent organization: Harvard Medical School; Massachusetts; USA |
Aging | NIH Blueprint for Neuroscience Research ; Ellison Medical Foundation ; NIBIB EB008129; NIMH U01-MH093765; NCRR P41-RR14075; NCRR U24-RR021382; NIBIB R01-EB006758; NIA R01-AG022381; National Center for Complementary and Alternative Medicine RC1-AT005728; NINDS R01-NS052585; NINDS R21-NS072652; NINDS R01-NS070963 |
PMID:22016733 | nlx_143919 | SCR_013152 | TRACULA - TRActs Constrained by UnderLying Anatomy, TRACULA: TRActs Constrained by UnderLying Anatomy, TRActs Constrained by UnderLying Anatomy | 2026-02-17 10:02:22 | 17 | |||||
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DRIFTER Resource Report Resource Website 10+ mentions |
DRIFTER (RRID:SCR_014937) | image analysis software, software application, data processing software, software resource | Model based Bayesian method for eliminating physiological noise from fMRI data. This algorithm uses image voxel analysis to isolate the cardiac and respiratory noise from the relevant data. | bayesian, physiological noise, fMRI, algorithm, cardiac, respiratory, image anaylsis, bold signal | has parent organization: Aalto University; Espoo; Finland | NICHD R01HD040712; NINDS R01NS037462; NINDS R01NS048279; NCR P41RR014075; NIMH R01MH083744; NIDCD R21DC010060; NIBIB R21EB007298; National Science Council Taiwan NSC 98-2320-B-002-004-MY3; National Science Council Taiwan NSC 100-2325-B-002-046; National Health Research Institute Taiwan NHRI-EX100-9715EC; Academy of Finland 124698; Academy of Finland 125349; Academy of Finland 127624; Academy of Finland 129670; Academy of Finland 218054; Academy of Finland 218248 |
PMID:22281675 | Free, Available for download, Acknowledgement requested | SCR_014937 | DRIFTER Toolbox | 2026-02-17 10:02:20 | 28 | |||||||
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MountainSort Resource Report Resource Website 10+ mentions |
MountainSort (RRID:SCR_017446) | software application, data processing software, software resource | Neurophysiological spike sorting software. | Neurophysiological, spike, sorting, BRAIN Initiative | is recommended by: BRAIN Initiative | NINDS NS090537 | Free, Available for download, Freely available | SCR_017446 | 2026-02-17 10:03:35 | 14 | |||||||||
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CloudReg Resource Report Resource Website |
CloudReg (RRID:SCR_022795) | image analysis software, software application, data processing software, software resource | Software automated, terascale, cloud based image analysis pipeline for preprocessing and cross modal, nonlinear registration between volumetric datasets with artifacts. Automatic terabyte scale cross modal brain volume registration. | brain volume, nonlinear registration, automatic terabyte scale, cross modal brain volume registration, image analysis pipeline, volumetric datasets with artifacts | is used by: BICCN | NIA R01 AG066184; NSF EEC 1707298; NIMH U19MH114821; Kavli Neuroscience Discovery Institute ; Karen Toffler Charitable Trust ; NIMH R01 MH099647; NIMH K08MH113039; NIDA 1K99DA050662; AP Giannini Foundation ; NINDS K99 NS116122; NIA P01AG009973; Johns Hopkins University Kavli Neuroscience Discovery Institute Postdoctoral Fellowship ; Microsoft Research |
PMID:34253927 | Free, Available for download, Freely available | https://github.com/neurodata/CloudReg/ | SCR_022795 | 2026-02-17 10:03:45 | 0 | |||||||
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Internet Brain Segmentation Repository Resource Report Resource Website 10+ mentions |
Internet Brain Segmentation Repository (RRID:SCR_001994) | IBSR | data or information resource, data set | Data set of manually-guided expert segmentation results along with magnetic resonance brain image data. Its purpose is to encourage the development and evaluation of segmentation methods by providing raw test and image data, human expert segmentation results, and methods for comparing segmentation results. Please see the MediaWiki for more information. This repository is meant to contain standard test image data sets which will permit a standardized mechanism for evaluation of the sensitivity of a given analysis method to signal to noise ratio, contrast to noise ratio, shape complexity, degree of partial volume effect, etc. This capability is felt to be essential to further development in the field since many published algorithms tend to only operate successfully under a narrow range of conditions which may not extend to those experienced under the typical clinical imaging setting. This repository is also meant to describe and discuss methods for the comparison of results. | 3d model, anatomy, brainstem, cerebellum, cortex, gray matter, imaging, morphology, mri, segmentation, volume, white matter, adult human, male, child, image collection, application, magnetic resonance, os independent, php, quality metrics, segmentation, test data, web service |
is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) has parent organization: Harvard Medical School; Massachusetts; USA |
Normal, Tumor | NINDS 1 R01 NS34189-01 | Free, Available for download, Freely available | nif-0000-00032 | http://www.cma.mgh.harvard.edu/ibsr/ | SCR_001994 | 2026-02-17 09:59:45 | 24 | |||||
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Lightning Pose Resource Report Resource Website |
Lightning Pose (RRID:SCR_024480) | software resource, software toolkit | Software video centric package for direct video manipulation. Semi supervised animal pose estimation algorithm, Bayesian post processing approach and deep learning package. Improved animal pose estimation via semi-supervised learning, Bayesian ensembling, and cloud-native open-source tools. | OpenBehavior, animal pose estimation algorithm, Bayesian post processing approach, direct video manipulation, | is listed by: OpenBehavior | Gatsby Charitable Foundation ; NINDS K99NS128075; Irma T Hirschl Trust ; NINDS NS075023; NINDS U19NS123716; NSF ; Simons Foundation |
PMID:37162966 | Free, Available for download, Freely available | https://edspace.american.edu/openbehavior/project/lightningpose/ | SCR_024480 | 2026-02-17 10:04:10 | 0 | |||||||
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Exon Array Browser Resource Report Resource Website 1+ mentions |
Exon Array Browser (RRID:SCR_008712) | Exon Array Browser | data or information resource, database, service resource | Transcriptome database of acutely isolated purified astrocytes, neurons, and oligodendrocytes. Provides improved cell-type-specific markers for better understanding of neural development, function, and disease. | mature mouse, forebrain, transcriptome, astrocyte, neuron, oligodendrocyte, brain development, brain function, molecular neuroanatomy resource, visualization | has parent organization: Stanford University; Stanford; California | NINDS R01NS045621; NEI R01EY10257; NEI EY07033; Medical Scientist Training Program Grant MSTP GM07365; Australian National Health and Medical Research Council CJ Martin Fellowship 400438; NIDDK DK54388; NCI CA095030 |
PMID:18171944 | Free, Freely available | nlx_143565 | SCR_008712 | 2026-02-17 10:01:24 | 1 | ||||||
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IMPACT Prognostic Calculator Resource Report Resource Website |
IMPACT Prognostic Calculator (RRID:SCR_004730) | IMPACT Prognostic Calculator | data analysis service, production service resource, analysis service resource, service resource | A calculator that calculates the prediction models for 6 month outcome after Traumatic Brain Injury. Based on extensive prognostic analysis the IMPACT investigators have developed prognostic models for predicting 6 month outcome in adult patients with moderate to severe head injury (Glasgow Coma Scale <=12) on admission. By entering the characteristics into the calculator, the models will provide an estimate of the expected outcome at 6 months. We present three models of increasing complexity (Core, Core + CT, Core + CT + Lab). These models were developed and validated in collaboration with the CRASH trial collaborators on large numbers of individual patient data (the IMPACT database). The models discriminate well, and are particularly suited for purposes of classification and characterization of large cohorts of patients. Extreme caution is required when applying the estimated prognosis to individual patients. The sequential prediction models may be used as an aid to estimate 6 month outcome in patients with severe or moderate traumatic brain injury (TBI). However, the prediction rule can only complement, never replace, clinical judgment and can therefore be used only as a decision-support system. | traumatic brain injury, head injury, brain injury, adult, human, severe, moderate, glasgow coma scale, one mind tbi | has parent organization: IMPACT: International Mission for Prognosis and Analysis of Clinical Trials in TBI | Traumatic brain injury | NINDS NS 42691 | nlx_143884 | SCR_004730 | International Mission for Prognosis and Analysis of Clinical Trials in TBI Prognostic Calculator | 2026-02-17 10:00:22 | 0 | ||||||
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Early Postnatal Developmental Mouse Brain Atlas Resource Report Resource Website 1+ mentions |
Early Postnatal Developmental Mouse Brain Atlas (RRID:SCR_024725) | epDevAtlas | organization portal, data or information resource, atlas, portal, laboratory portal | Suite of open access resources including 3D atlases of early postnatally developing mouse brain and mapped cell type density growth charts, which can be used as standalone resources or to implement data integration. Web platform can be utilized to analyze and visualize the spatiotemporal growth of GABAergic, microglial, and cortical layer-specific cell type densities in 3D. Morphologically averaged symmetric template brains serve as the basis reference space and coordinate system with an isotropic resolution of 20 μm (XYZ in coronal plane). Average transformations were conducted at 20 μm voxel resolution by interpolating high resolution serial two photon tomography images from primarily Vip-IRES-Cre;Ai14 mice at postnatal (P) ages P4, P6, P8, P10, P12, and P14. For all ages, anatomical labels from the P56 Allen Mouse Brain Common Coordinate Framework (Allen CCFv3) were iteratively down registered to each early postnatal time point in a non-linear manner, aided by manual parcellations of landmarks in 3D, consistent with the Allen Mouse Reference Atlas Ontology. | 3D atlases, early postnatally developing mouse brain, mapped cell type density growth charts, Allen Mouse Reference Atlas Ontology, |
uses: Allen Mouse Reference Atlas Ontology uses: Allen Mouse Brain Common Coordinate Framework is organization facet of: BRAIN Initiative Cell Atlas Network |
NIMH RF1MH12460501; NINDS R01NS108407 |
DOI:10.1101/2023.11.24.568585 | Free, Freely available | SCR_024725 | 2026-02-17 10:04:13 | 3 | |||||||
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Harmonized DRG and TG Reference Atlas Resource Report Resource Website |
Harmonized DRG and TG Reference Atlas (RRID:SCR_025720) | data or information resource, atlas, reference atlas, source code, software resource | Harmonized cell atlases using sc/snRNA-seq data obtained from dorsal root ganglia and trigeminal ganglio mammalian datasets. | Harmonized cell atlas, peripheral nervous system, RNA-Seq, dorsal root ganglion, trigeminal ganglia, | is related to: NIH PRECISION Human Pain Network | Pain | Burroughs Wellcome Fund ; Rita Allen Foundation ; Migraine Research Foundation ; Edwards PhD Studentship in Pain Research ; Barry Family Harvard Stem Cell Institute Award ; NINDS U19NS130617; NINDS R01NS119476; NINDS U19NS130608; NINDS U19NS130607; NIDA DP1DA054343; NEI U01EY034709; Teva Pharmaceuticals ; BWH Women’s Brain Initiative ; BWH Neurotechnology Studio ; MGB Gene and Cell Therapy Institute |
DOI:10.1126/sciadv.adj9173 | Free, Freely available | https://github.com/Renthal-Lab/harmonized_atlas | SCR_025720 | 2026-02-17 10:05:07 | 0 | ||||||
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DevATLAS Resource Report Resource Website |
DevATLAS (RRID:SCR_025718) | data or information resource, reference atlas, atlas | Whole brain developmental map of neuronal circuit maturation. Generated by whole brain spatiotemporal mapping of circuit maturation during early postnatal development. Standard reference for normative developmental trajectory of neuronal circuit maturation, as well as high throughput platform to pinpoint when and where circuit maturation is disrupted in mouse models of neurodevelopmental disorders, such as fragile X syndrome. | Whole brain developmental map, neuronal circuit maturation, whole brain spatiotemporal mapping, circuit maturation, early postnatal development, mouse models of neurodevelopmental disorders, | Human Frontier Science Program ; Brain Research Foundation Seed Grant ; Simons Center for the Social Brain Equipment Grant ; Paul and Lilah Newton Brain Science Award ; NIMH RF1MH124605; NIDCD DC014701; NINDS NS123710; NINDS NS115543; NIMH MH116673 |
PMID:38260331 | Free, Freely available | DevATLAS | SCR_025718 | Developmental Activation Timing-based Longitudinal Acquisition System | 2026-02-17 10:04:53 | 0 | |||||||
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MetaCycle Resource Report Resource Website 10+ mentions |
MetaCycle (RRID:SCR_025729) | software resource, software toolkit | Software R package for detecting rhythmic signals from large scale time-series data. Used to evaluate periodicity in large scale data. | detecting rhythmic signals, large scale time-series data, rhythmic signals, evaluate periodicity, large scale data, | NINDS R01NS054794; Defence Advanced Research Projects Agency |
PMID:27378304 | Free, Available for download, Freely available | https://github.com/gangwug/MetaCycle | SCR_025729 | 2026-02-17 10:04:24 | 49 | ||||||||
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Collaborative Cohort of Cohorts for COVID-19 Research Resource Report Resource Website 1+ mentions |
Collaborative Cohort of Cohorts for COVID-19 Research (RRID:SCR_026322) | C4R | data or information resource, topical portal, portal, disease-related portal | Portal provides information about nationwide study of more than 50,000 individuals to determine factors that predict disease severity and long-term health impacts of COVID-19. | nationwide study, determine factors, predict disease severity, long-term health impacts, COVID-19 | COVID-19 | NHLBI ; NINDS ; NIA |
SCR_026322 | 2026-02-17 10:04:29 | 1 | |||||||||
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ArUco Resource Report Resource Website 10+ mentions |
ArUco (RRID:SCR_026572) | source code, software resource, instrument resource | Automated rodent behavioral scoring system, complete with 3D design files and code/software. System monitors behavioral engagement using open-source software. 3D design files and necessary software has been made available, as well as code that can be used for data analysis. | OpenBehavior, Aruco marker based tracking, pose estimation, rodent behavioral session, | is listed by: OpenBehavior | NINDS R01NS110823; United States (US) Department of Veterans Affairs Rehabilitation Research and Development Service ; University of Texas at Dallas |
DOI:10.1523/ENEURO.0500-23.2024 | Free, Available for download, Freely available | https://edspace.american.edu/openbehavior/project/aruco-markers/ | SCR_026572 | Augmented Reality University of Cordoba, Aruco | 2026-02-17 10:04:32 | 14 |
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