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http://purl.bioontology.org/ontology/TM-OTHER-FACTORS

Ontology of the value set for the Other Factors property of the International Classification of Traditional Medicine (ICTM).

Proper citation: Traditional Medicine Other Factors Value Set (RRID:SCR_010437) Copy   

•   Source: SciCrunch Registry

http://purl.bioontology.org/ontology/TRON

Ontology about the anatomical structures of the red flour beetle Tribolium castaneum in the developmental stages larva, pupa and adult.

Proper citation: Tribolium Ontology (RRID:SCR_010440) Copy   

•   Source: SciCrunch Registry

http://purl.bioontology.org/ontology/PAE

THIS RESOURCES IS NO LONGER IN SERVICE, documented on April 23, 2014. REPLACED BY: Plant Ontology (PO). A controlled vocabulary of plant morphological and anatomical structures representing organs, tissues, cell types, and their biological relationships based on spatial and developmental organization. Note that this has been subsumed into the PO. This file is created by filtering plant_ontology_assert.obo to contain only terms from the plant anatomical entity branch of the PO. For more information, please see: http://palea.cgrb.oregonstate.edu/viewsvn/Poc/tags/live/

Proper citation: Plant Anatomy (RRID:SCR_010408) Copy   

•   Source: SciCrunch Registry

http://purl.bioontology.org/ontology/NPO

An ontology that represents the basic knowledge of physical, chemical and functional characteristics of nanotechnology as used in cancer diagnosis and therapy.

Proper citation: NanoParticle Ontology (RRID:SCR_010369) Copy   

•   Source: SciCrunch Registry

http://purl.bioontology.org/ontology/NCIT

A vocabulary for clinical care, translational and basic research, and public information and administrative activities.

Proper citation: National Cancer Institute Thesaurus (RRID:SCR_010370) Copy   

•   Source: SciCrunch Registry

http://purl.bioontology.org/ontology/NATPRO

An ontology for describing biological activities of natural products.

Proper citation: Natural Products Ontology (RRID:SCR_010373) Copy   

•   Source: SciCrunch Registry

http://purl.bioontology.org/ontology/RADLEX

A controlled terminology for radiology-a single unified source of radiology terms for radiology practice, education, and research. For license information see : http://www.rsna.org/uploadedFiles/RSNA/Content/Informatics/radlex_public_license_version_1-0-1.pdf Converted to use OWL format submissions

Proper citation: Radiology Lexicon (RRID:SCR_010418) Copy   

•   Source: SciCrunch Registry

http://purl.bioontology.org/ontology/RH-MESH

Ontology of a modified version of Medical Subjects Headings Thesaurus 2014, that is an OWL representation of MeSH so that it can be integrated with other ontologies represented in OWL. It contains all terms that are in MeSH and in the MeSH concept tree, including the pharmacological actions (represented as subclass relations). Concepts in the MeSH concept tree are merged with MeSH term ids. Note that, while this ontology is composed of MeSH terms, it does not correspond directly to UMLS MeSH. In particular, a single term in UMLS MeSH often results in multiple classes in this ontology. For example, in MeSH there is a single term with the label Heart. The internal code (unique identifier) for this term is A07.541. In this ontology there are two entirely different terms, both of which have the label Heart. The codes for these terms are A07.541 and D006321.

Proper citation: Robert Hoehndorf Version of MeSH (RRID:SCR_010419) Copy   

•   Source: SciCrunch Registry

http://purl.bioontology.org/ontology/PMA

Ontology of a system for tracking grants and producing reports - Users can access grant data through a query interface and a variety of pre-defined forms and reports.

Proper citation: Portfolio Management Application (RRID:SCR_010411) Copy   

•   Source: SciCrunch Registry

http://purl.bioontology.org/ontology/NMOSP_1_6

Species taxonomy for the data curated in NeuroMorpho.Org. The existing ontologies are re-used as needed as the new metadata information for species and strains is deposited in NeuroMorpho.Org database. This species hierarchy consists of 56% of NCBI taxonomy and 39% of Rat strain ontology. The remaining 5% mostly consists of new concepts and few others from NIFSTD and MESH.

Proper citation: NeuroMorpho.Org species ontology old (RRID:SCR_010379) Copy   

•   Source: SciCrunch Registry

http://purl.bioontology.org/ontology/PPIO

A structured controlled vocabulary for the annotation of experiments concerned with protein-protein interactions.

Proper citation: Protein-Protein Interaction Ontology (RRID:SCR_010413) Copy   

•   Source: SciCrunch Registry

http://purl.bioontology.org/ontology/PROPREO

A comprehensive proteomics data and process provenance ontology.

Proper citation: Proteomics Data and Process Provenance Ontology (RRID:SCR_010414) Copy   

•   Source: SciCrunch Registry

http://purl.bioontology.org/ontology/PROVO

Ontology that expresses the PROV Data Model using the OWL2 Web Ontology Language (OWL2) providing a set of classes, properties, and restrictions that can be used to represent and interchange provenance information generated in different systems and under different contexts. It can also be specialized to create new classes and properties to model provenance information for different applications and domains.

Proper citation: Provenance Ontology (RRID:SCR_010415) Copy   

•   Source: SciCrunch Registry

http://purl.bioontology.org/ontology/QIBO

An ontology that describes various concepts in quantitative imaging biomarkers.

Proper citation: Quantitative Imaging Biomarker Ontology (RRID:SCR_010417) Copy   

•   Source: SciCrunch Registry

http://purl.bioontology.org/ontology/NONRCTO

Ontology to help the systematic review and meta-analysis process of non randomized clinical trials.

Proper citation: Non-Randomized Controlled Trials Ontology (RRID:SCR_010380) Copy   

•   Source: SciCrunch Registry

http://purl.bioontology.org/ontology/NCCO

Ontology that contains activities that nurses use while coordinating care among patients.

Proper citation: Nursing Care Coordination Ontology (RRID:SCR_010381) Copy   

•   Source: SciCrunch Registry

http://purl.bioontology.org/ontology/ONTOKBCF

An ontological knowledge base model for cystic fibrosis. There are molecular genetic information (i.e. gene mutations) and health information included in OntoKBCF. The purposes of OntoKBCF include management of molecular genetic information and health information and embedding OntoKBCF into EHR settings.

Proper citation: Ontological Knowledge Base Model for Cystic Fibrosis (RRID:SCR_010382) Copy   

•   Source: SciCrunch Registry

http://purl.bioontology.org/ontology/OGDI

Ontology used to model the scientific investigation, especially Genome-Wide Association Study (GWAS), to find out genetic susceptibility factor to disease, such as Diabetes. It models the genetic varaints, polymorphisms, statistical measurement, populations and other elements that are essential to determine a genetic susceptibility factor in GWAS study. It must be used with other two ontologies, in the case of Diabetes, :Ontology of Geographical Region (OGR) and Ontology of Glucose Metabolism Disorder (OGMD) .

Proper citation: Ontology for Genetic Disease Investigations (RRID:SCR_010385) Copy   

•   Source: SciCrunch Registry

http://purl.bioontology.org/ontology/IMMDIS

Ontology generated as part of the Bioinformatics Integration Support Contract (BISC) that is based on the National Library of Medicine (NLM) Medical Subject Headings; National Cancer Institute Thesaurus; International Classification of Diseases, Ninth Revision, Clinical Modification (ICD-9-CM); ICD-10; and other open source public databases. Specific information may be available about a class, including Preferred_Name, DEFINITION, Synonym, etc.

Proper citation: Immune Disorder Ontology (RRID:SCR_010344) Copy   

•   Source: SciCrunch Registry

http://purl.bioontology.org/ontology/InterNano

A custom-built terminology to describe the nanomanufacturing enterprise.

Proper citation: InterNano Nanomanufacturing Taxonomy (RRID:SCR_010346) Copy   

•   Source: SciCrunch Registry