Searching the RRID Resource Information Network
| Plasmid Name | Proper Citation | Insert Name | Organism | Bacterial Resistance | Defining Citation |
Comments |
||||
|---|---|---|---|---|---|---|---|---|---|---|
|
MG1655 ΔendA ΔrecA Resource Report Resource Website |
RRID:Addgene_37853 | None | PMID:20643967 | Vector Backbone:N/A; Vector Types:Other, E. coli bacterial strain; Bacterial Resistance:None | 2023-04-05 07:51:53 | 0 | ||||
|
MG1655 ΔendA ΔrecA (DE3) Resource Report Resource Website |
RRID:Addgene_37854 | None | PMID:21110891 | Vector Backbone:N/A; Vector Types:Other, E. coli bacterial strain; Bacterial Resistance:None | 2023-04-05 07:51:53 | 0 | ||||
|
KI (37)-Oplac2 Resource Report Resource Website |
RRID:Addgene_52704 | KI (37)-Oplac2 strain | None | PMID:22605776 | To test whether the mRNA secondary structure of our codon redesigned sequences affected expression, we substituted the first 37 nucleotides of Oplac2 with those of KIlac, producing and KI(37)-Oplac2. | Vector Backbone:n/a; Vector Types:; Bacterial Resistance:None | 2023-04-05 07:56:43 | 0 | ||
|
degtag Resource Report Resource Website |
RRID:Addgene_52705 | degtag strain | None | PMID:22605776 | To generate the degtag strain, we introduced the ssrA tag to the C-terminus of LacZ, thus targeting the protein for degradation by the ClpXP and ClpAP proteases. | Vector Backbone:n/a; Vector Types:; Bacterial Resistance:None | 2023-04-05 07:56:43 | 0 | ||
|
KI (37)-Oplac1 Resource Report Resource Website |
RRID:Addgene_52703 | KI (37)-Oplac1 strain | None | PMID:22605776 | To test whether the mRNA secondary structure of our codon redesigned sequences affected expression, we substituted the first 37 nucleotides of OpLac1 with those of KIlac. | Vector Backbone:n/a; Vector Types:; Bacterial Resistance:None | 2023-04-05 07:56:43 | 0 | ||
|
OpLac2-delta-6 Resource Report Resource Website |
RRID:Addgene_52700 | OpLac2-Δ6 strain | None | PMID:22605776 | Oplac2Δ6 was erroneously synthesized missing the first 6 nucleotides of Oplac2. These deletions correspond to the first 2 N-terminal amino acid residues (Methionine and Threonine), and instead begin at the Methionine at position 3. | Vector Backbone:na; Vector Types:; Bacterial Resistance:None | 2023-04-05 07:56:43 | 0 | ||
|
Oplac1 (37)-KI Resource Report Resource Website |
RRID:Addgene_52701 | Oplac1 (37)-KI strain | None | PMID:22605776 | To test whether the mRNA secondary structure of our codon redesigned sequences affected expression, we substituted the first 37 nucleotides of KILac with those of OpLac1. | Vector Backbone:na; Vector Types:; Bacterial Resistance:None | 2023-04-05 07:56:43 | 0 | ||
|
S56L Resource Report Resource Website |
RRID:Addgene_52709 | S56L strain | None | PMID:22605776 | Impaired LacY function | Vector Backbone:n/a; Vector Types:; Bacterial Resistance:None | 2023-04-05 07:56:44 | 0 | ||
|
delta-Z Resource Report Resource Website |
RRID:Addgene_52706 | ΔZ strain | None | PMID:22605776 | lacZ deletion | Vector Backbone:n/a; Vector Types:; Bacterial Resistance:None | 2023-04-05 07:56:43 | 0 | ||
|
G794D Resource Report Resource Website |
RRID:Addgene_52710 | G794D strain | None | PMID:22605776 | Vector Backbone:n/a; Vector Types:; Bacterial Resistance:None | 2023-04-05 07:56:44 | 0 | |||
|
KIlac Resource Report Resource Website |
RRID:Addgene_52696 | KIlac strain | None | PMID:22605776 | KIlac refers to the knock-in of the wild-type operon into the attTn7 locus; this strain was used as the reference strain for all analyses. We constructed all knock-in strains using the approach of McKenzie and Craig. The knock-in contained the entire lac operon starting 75bp upstream of lacI and ending 100bp downstream of lacA. The ΔZYA strain was transformed with pGRG37. The plasmid carried both the lac operon and the transposon genes tnsABCD, which allow for a site-specific insertion at attTn7. | Vector Backbone:n/a; Vector Types:; Bacterial Resistance:None | 2023-04-05 07:56:43 | 0 | ||
|
OpLac1 Resource Report Resource Website |
RRID:Addgene_52697 | OpLac1 strain | None | PMID:22605776 | The sequence Oplac1 was synthesized using preferred codons at every position (GENEART), thus optimizing the codon adaptation index. | Vector Backbone:na; Vector Types:; Bacterial Resistance:None | 2023-04-05 07:56:43 | 0 | ||
|
OpLac2 Resource Report Resource Website |
RRID:Addgene_52699 | OpLac2 strain | None | PMID:22605776 | Oplac2 was designed by a proprietary optimization strategy (developed by DNA 2.0) that incorporated codons for a subset of amino acids read by tRNAs that are the most highly charged during amino acid starvation. | Vector Backbone:na; Vector Types:; Bacterial Resistance:None | 2023-04-05 07:56:43 | 0 | ||
|
HL 4233 Resource Report Resource Website |
RRID:Addgene_52944 | none | Other | None | PMID:25087841 | Vector Backbone:none; Vector Types:Synthetic Biology; Bacterial Resistance:None | 2023-04-05 07:56:46 | 0 | ||
|
HL 932 Resource Report Resource Website |
RRID:Addgene_52940 | none | Other | None | PMID:25087841 | Vector Backbone:none; Vector Types:Synthetic Biology; Bacterial Resistance:None | 2023-04-05 07:56:45 | 0 | ||
|
HL3796 Resource Report Resource Website |
RRID:Addgene_52951 | none | Other | None | PMID: | Vector Backbone:none; Vector Types:Synthetic Biology; Bacterial Resistance:None | 2023-04-05 07:56:46 | 0 | ||
|
HL4018 Resource Report Resource Website |
RRID:Addgene_52952 | none | Other | None | PMID: | Vector Backbone:none; Vector Types:Synthetic Biology; Bacterial Resistance:None | 2023-04-05 07:56:46 | 0 | ||
|
JM109 Resource Report Resource Website 1+ mentions |
RRID:Addgene_49761 | Relevant genotype: recA1, endA1, gyrA96, thi, hsdR17, supE44, relA1, λ-, Δ(lac-proAB), [F' traD36, proAB, lacIqZΔM15] | None | PMID:2985470 | Vector Backbone:N/A; Vector Types:; Bacterial Resistance:None | 2023-04-05 07:56:17 | 1 | |||
|
JM107 Resource Report Resource Website |
RRID:Addgene_49759 | Relevant genotype: endA1, gyrA96, thi, hsdR17, supE44, relA1, λ-, Δ(lac-proAB), [F' traD36, proAB, lacIqZΔM15] | Other | None | PMID:2985470 | Vector Backbone:N/A; Vector Types:; Bacterial Resistance:None | 2023-04-05 07:56:17 | 0 | ||
|
JM106 Resource Report Resource Website |
RRID:Addgene_49757 | Relevant genotype: endA1, gyrA96, thi, hsdR17, supE44, relA1, λ-, Δ(lac-proAB) | Other | None | PMID:2985470 | Vector Backbone:N/A; Vector Types:; Bacterial Resistance:None | 2023-04-05 07:56:17 | 0 |
Can't find your Plasmid?
We recommend that you click next to the search bar to check some helpful tips on searches and refine your search firstly. If you want to find a specific plasmid, it's easier to enter an RRID or an Addgene Catalog Number to search. You can refine the search results using Facets on the left side of the search results page. If you are on the table view, you can also search in a specific column by clicking the column title and enter the keywords.
If you still could not find your plasmid in the search results, please help us by registering it into the system — it's easy. Register it with Addgene.
Welcome to the FDI Lab - SciCrunch.org Resources search. From here you can search through a compilation of resources used by FDI Lab - SciCrunch.org and see how data is organized within our community.
You are currently on the Community Resources tab looking through categories and sources that FDI Lab - SciCrunch.org has compiled. You can navigate through those categories from here or change to a different tab to execute your search through. Each tab gives a different perspective on data.
If you have an account on FDI Lab - SciCrunch.org then you can log in from here to get additional features in FDI Lab - SciCrunch.org such as Collections, Saved Searches, and managing Resources.
Here is the search term that is being executed, you can type in anything you want to search for. Some tips to help searching:
If you are logged into FDI Lab - SciCrunch.org you can add data records to your collections to create custom spreadsheets across multiple sources of data.
Here are the facets that you can filter the data by.
If you have any further questions please check out our FAQs Page to ask questions and see our tutorials. Click this button to view this tutorial again.
The SciCrunch Infrastructure was developed as a cooperative data platform to be used by diverse communities in making data more FAIR.
scicrunch.org
