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Integrated Animals is a virtual database currently indexing available animal strains and mutants from: AGSC (Ambystoma), BCBC (mice), BDSC (flies), European Xenopus Resource Center (frog), The National Xenopus Resource (frog), Xenopus Express (frog), CWRU Cystic Fibrosis Mouse Models (mice), DGGR (flies), FlyBase (flies), IMSR (mice), MGI (mice), MMRRC (mice), NSRRC (pig), RGD (rats), Sperm Stem Cell Libraries for Biological Research (rats), Tetrahymena Stock Center (Tetrahymena), WormBase (worms), XGSC (Xiphophorus), ZFIN (zebrafish), and ZIRC (zebrafish). Note, the IMSR data is linked, but users may need to re-execute the search if the top mouse is not returned properly.
Note: BCBC is no longer in service, so the links may not be functional.
The record is no longer available at this source.
Source Database: WB, WormBase (WB)
Genetic Background: (null)
Affected Genes:
Genomic Alteration:
Availability: Not Available
References:
Synonyms:
Notes: (null) This is a legacy resource.
Proper citation: RRID:WB-STRAIN:ZZY0041 Copy
The record is no longer available at this source.
Source Database: WB, WormBase (WB)
Genetic Background: (null)
Affected Genes:
Genomic Alteration:
Availability: Not Available
References:
Synonyms:
Notes: (null) This is a legacy resource.
Proper citation: RRID:WB-STRAIN:TRG_1481 Copy
The record is no longer available at this source.
Source Database: WB, WormBase (WB)
Genetic Background: (null)
Affected Genes:
Genomic Alteration:
Availability: Not Available
References:
Synonyms:
Notes: (null) This is a legacy resource.
Proper citation: RRID:WB-STRAIN:TRG_1482 Copy
The record is no longer available at this source.
Source Database: WB, WormBase (WB)
Genetic Background: (null)
Affected Genes:
Genomic Alteration:
Availability: Not Available
References:
Synonyms:
Notes: (null) This is a legacy resource.
Proper citation: RRID:WB-STRAIN:WN046 Copy
http://www.wormbase.org/db/get?name=WBStrain00031002
Source Database: WormBase (WB)
Genetic Background:
Affected Genes:
Genomic Alteration:
Availability: available
References:
Synonyms: syIs337 syIs398 III.
Notes: Made_by: Han Wang and Jonathan Liu|"syIs337 [15xUAS::pes-10::GFP::let-858 3'UTR + ttx-3p::RFP + 1kb DNA ladder(NEB)]. syIs398 [hsp16.41p::NLS::GAL4SK::VP64::let-858 3'UTR + unc-122p::RFP + 1kb DNA ladder(NEB)]. syIs337 is a GFP cGAL effector. syIs398 is hsp-16.41 cGAL driver for heat shock promoter. Bright GFP fluorescence in a few head neurons without heat shock. Reference: Wang H, et al. Nat Methods. 2017 Feb;14(2):145-148."
Proper citation: RRID:WB-STRAIN:WBStrain00031002 Copy
http://www.wormbase.org/db/get?name=WBStrain00031089
Source Database: WormBase (WB)
Genetic Background:
Affected Genes:
Genomic Alteration:
Availability: unknown
References:
Synonyms: nurf-1(kah91)II/ oxTi924 II
Notes: N2 Background
Proper citation: RRID:WB-STRAIN:WBStrain00031089 Copy
http://www.wormbase.org/db/get?name=WBStrain00031086
Source Database: WormBase (WB)
Genetic Background:
Affected Genes:
Genomic Alteration:
Availability: unknown
References:
Synonyms: dpy-10 (kah83)II kyIR1(V, CB4856>N2) qgIR1(X, CB4856>N2).
Notes: Information on this strain can be found in the following publication : https://www.biorxiv.org/content/early/2018/04/30/309997
Proper citation: RRID:WB-STRAIN:WBStrain00031086 Copy
http://www.wormbase.org/db/get?name=WBStrain00031085
Source Database: WormBase (WB)
Genetic Background:
Affected Genes:
Genomic Alteration:
Availability: unknown
References:
Synonyms: dpy-10 (kah82)II.
Notes: Information on this strain can be found in the following publication : https://www.biorxiv.org/content/early/2018/04/30/309997
Proper citation: RRID:WB-STRAIN:WBStrain00031085 Copy
http://www.wormbase.org/db/get?name=WBStrain00031084
Source Database: WormBase (WB)
Genetic Background:
Affected Genes:
Genomic Alteration:
Availability: unknown
References:
Synonyms: nurf-1(kah66,kah73)II
Notes: N2 Background
Proper citation: RRID:WB-STRAIN:WBStrain00031084 Copy
http://www.wormbase.org/db/get?name=WBStrain00031009
Source Database: WormBase (WB)
Genetic Background:
Affected Genes:
Genomic Alteration:
Availability: available
References:
Synonyms: syIs371 III.
Notes: Made_by: Han Wang and Jonathan Liu|"syIs371"|"syIs371[15xUAS::pes-10::HisCl1::SL2::GFP::let-858 3'UTR + unc-122p::GFP + 1kb DNA ladder(NEB)]. Histamine chloride channel cGAL effector. Reference: Wang H, et al. Nat Methods. 2017 Feb;14(2):145-148."
Proper citation: RRID:WB-STRAIN:WBStrain00031009 Copy
http://www.wormbase.org/db/get?name=WBStrain00031007
Source Database: WormBase (WB)
Genetic Background:
Affected Genes:
Genomic Alteration:
Availability: available
References:
Synonyms: syIs409 X.
Notes: Made_by: Han Wang and Jonathan Liu|"syIs409"|"syIs409 [15xUAS::pes-10::mCherry::H2B::let-858 3'UTR + unc-122p::GFP + pBlueScript]. mCherry::H2B cGAL effector. Very weak background fluorescence in first ring of intestinal cells and posterior intestinal cells. Reference: Wang H, et al. Nat Methods. 2017 Feb;14(2):145-148."
Proper citation: RRID:WB-STRAIN:WBStrain00031007 Copy
http://www.wormbase.org/db/get?name=WBStrain00031005
Source Database: WormBase (WB)
Genetic Background:
Affected Genes:
Genomic Alteration:
Availability: available
References:
Synonyms: syIs406 IV.
Notes: Made_by: Han Wang and Jonathan Liu|"syIs406 [15xUAS::pes-10::GFP::H2B::let-858 3'UTR + ttx-3p::RFP + pBlueScript]. GFP::H2B effector. Very weak background fluorescence in first ring of intestinal cells and posterior intestinal cells. Reference: Wang H, et al. Nat Methods. 2017 Feb;14(2):145-148."
Proper citation: RRID:WB-STRAIN:WBStrain00031005 Copy
http://www.wormbase.org/db/get?name=WBStrain00031093
Source Database: WormBase (WB)
Genetic Background:
Affected Genes:
Genomic Alteration:
Availability: unknown
References:
Synonyms: nurf-1(kah106) II/ oxTi924 II
Notes: N2 Background
Proper citation: RRID:WB-STRAIN:WBStrain00031093 Copy
http://www.wormbase.org/db/get?name=WBStrain00031092
Source Database: WormBase (WB)
Genetic Background:
Affected Genes:
Genomic Alteration:
Availability: unknown
References:
Synonyms: nurf-1(kah99)II/ oxTi924 II
Notes: N2 Background
Proper citation: RRID:WB-STRAIN:WBStrain00031092 Copy
http://www.wormbase.org/db/get?name=WBStrain00031091
Source Database: WormBase (WB)
Genetic Background:
Affected Genes:
Genomic Alteration:
Availability: unknown
References:
Synonyms: nurf-1(kah96)II/ oxTi924 II
Notes: N2 Background
Proper citation: RRID:WB-STRAIN:WBStrain00031091 Copy
http://www.wormbase.org/db/get?name=WBStrain00031014
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00019361(clik-3)
Genomic Alteration: WBGene00019361(clik-3)
Availability: available
References:
Synonyms: K03E5.2(sy1082) I.
Notes: Made_by: Heenam Park|"STOP-IN Cassette (;43 bp universal insertion fragment with 3-frame stop codon for knock-out) GGGAAGTTTGTCCAGAGCAGAGGTGACTAAGTGATAAgctagc"|"Superficially wild-type. CRISPR/Cas9 engineered STOP-IN null mutant of K03E5.2.Universal 43bp-long knock-in insertion with 3-frame stop codon (STOP-IN cassette).left flanking sequence: tatattttttgaaattttccagggaATGACCGGTT; right flanking sequence: GTCAAGGGAAAGCATTTGAAGAGAATTTGGGAGCT;inserted sequence between the two flanking sequence (STOP-IN cassette): GGGAAGTTTGTCCAGAGCAGAGGTGACTAAGTGATAAgctagc sgRNA: ATTGCTTGGCACCTCGACGGReference: Wang H, et al. G3 (Bethesda)."
Proper citation: RRID:WB-STRAIN:WBStrain00031014 Copy
http://www.wormbase.org/db/get?name=WBStrain00031018
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00020808(clik-1)
Genomic Alteration: WBGene00020808(clik-1)
Availability: available
References:
Synonyms: clik-1(sy1084) V.
Notes: Made_by: Heenam Park|"STOP-IN Cassette (;43 bp universal insertion fragment with 3-frame stop codon for knock-out) GGGAAGTTTGTCCAGAGCAGAGGTGACTAAGTGATAAgctagc"|"Superficially wild-type. CRISPR/Cas9 engineered STOP-IN null mutant of clik-1(T25F10.6) Universal 43bp-long knock-in insertion with 3-frame stop codon (STOP-IN cassette).left flanking sequence: GGAGGAGATCGAGGAGGACGAGCCAGTCGCCGACG; right flanking sequence: AGAACCAAGAGCCAGAGgtaatcgttttttgccat;inserted sequence between the two flanking sequence (STOP-IN cassette): GGGAAGTTTGTCCAGAGCAGAGGTGACTAAGTGATAAgctagcReference: Wang H, et al. G3 (Bethesda)."
Proper citation: RRID:WB-STRAIN:WBStrain00031018 Copy
http://www.wormbase.org/db/get?name=WBStrain00031017
Source Database: WormBase (WB)
Genetic Background:
Affected Genes:
Genomic Alteration:
Availability: unknown
References:
Synonyms: T05C3.2(sy1081) V
Notes: STOP-IN Cassette (;43 bp universal insertion fragment with 3-frame stop codon for knock-out) GGGAAGTTTGTCCAGAGCAGAGGTGACTAAGTGATAAgctagc
Proper citation: RRID:WB-STRAIN:WBStrain00031017 Copy
http://www.wormbase.org/db/get?name=WBStrain00031016
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00020254(T05C3.2)
Genomic Alteration: WBGene00020254(T05C3.2)
Availability: available
References:
Synonyms: T05C3.2(sy1080) V.
Notes: Made_by: Han Wang/Heenam Park/Wen Chen|"STOP-IN Cassette (;43 bp universal insertion fragment with 3-frame stop codon for knock-out) GGGAAGTTTGTCCAGAGCAGAGGTGACTAAGTGATAAgctagc"|"Superficially wild-type. CRISPR/Cas9 engineered STOP-IN null mutant of T05C3.2; Universal 43bp-long knock-in insertion with 3-frame stop codon (STOP-IN cassette).Left flanking sequence: GTTCACCGATACAACTGTAGAACGAAACGCGCTAARight flanking sequence: TGGAGGAGATTTATCCAAAGCTTAAGGAATACTGCinserted sequence between the two flanking sequence (STOP-In casette): GGGAAGTTTGTCCAGAGCAGAGGTGACTAAGTGATAAgctagc. sgRNA : AGAACGAAACGCGCTAATGGMethod Reference: G3 (Bethesda). 2018 Nov 6;8(11):3607-3616"
Proper citation: RRID:WB-STRAIN:WBStrain00031016 Copy
http://www.wormbase.org/db/get?name=WBStrain00031015
Source Database: WormBase (WB)
Genetic Background:
Affected Genes:
Genomic Alteration:
Availability: unknown
References:
Synonyms: K03E5.2 (sy1083) I
Notes: STOP-IN Cassette (;43 bp universal insertion fragment with 3-frame stop codon for knock-out) GGGAAGTTTGTCCAGAGCAGAGGTGACTAAGTGATAAgctagc
Proper citation: RRID:WB-STRAIN:WBStrain00031015 Copy
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