Searching the RRID Resource Information Network
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Integrated Animals is a virtual database currently indexing available animal strains and mutants from: AGSC (Ambystoma), BCBC (mice), BDSC (flies), European Xenopus Resource Center (frog), The National Xenopus Resource (frog), Xenopus Express (frog), CWRU Cystic Fibrosis Mouse Models (mice), DGGR (flies), FlyBase (flies), IMSR (mice), MGI (mice), MMRRC (mice), NSRRC (pig), RGD (rats), Sperm Stem Cell Libraries for Biological Research (rats), Tetrahymena Stock Center (Tetrahymena), WormBase (worms), XGSC (Xiphophorus), ZFIN (zebrafish), and ZIRC (zebrafish). Note, the IMSR data is linked, but users may need to re-execute the search if the top mouse is not returned properly.
Note: BCBC is no longer in service, so the links may not be functional.
http://www.wormbase.org/db/get?name=WBStrain00031950
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00000060(acr-21)
Genomic Alteration: WBGene00000060(acr-21)
Availability: available
References:
Synonyms: acr-21(ok1314) III.
Notes: F27B3.2 Homozygous. Outer Left Sequence: caaaagagggtgtcgggtaa. Outer Right Sequence: aaacaccacaagcaggaagc. Inner Left Sequence: aaactgcagacggagctcat. Inner Right Sequence: tgaaattttgggaggattcg. Inner Primer PCR Length: 2667. Estimated Deletion Size: about 1300 bp.|"Made_by: OMRF Knockout Group"|"Mutagen:UV/TMP"|"This strain was provided by the C. elegans Gene Knockout Project at the Oklahoma Medical Research Foundation, which was part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use."
Proper citation: RRID:WB-STRAIN:WBStrain00031950 Copy
http://www.wormbase.org/db/get?name=WBStrain00031958
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00016378(imp-3)
Genomic Alteration: WBGene00016378(imp-3)
Availability: available
References:
Synonyms: C33H5.11(ok1326) IV.
Notes: C33H5.14 Homozygous. Outer Left Sequence: tcccaagcctggttaagatg. Outer Right Sequence: tgccatcccaaacatcacta. Inner Left Sequence: ctgggtccatcatcactcct. Inner Right Sequence: ccactcctctccgtcttctg. Inner Primer PCR Length: 2936. Estimated Deletion Size: about 900 bp.|"Made_by: OMRF Knockout Group"|"Mutagen:UV/TMP"|"This strain was provided by the C. elegans Gene Knockout Project at the Oklahoma Medical Research Foundation, which was part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use."
Proper citation: RRID:WB-STRAIN:WBStrain00031958 Copy
http://www.wormbase.org/db/get?name=WBStrain00032059
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00020130(igcm-2)
Genomic Alteration: WBGene00020130(igcm-2)
Availability: available
References:
Synonyms: SSSD1.1(ok1527) X.
Notes: Made_by: OMRF Knockout Group|"Mutagen:UV/TMP"|"SSSD1.1 Homozygous. Outer Left Sequence: cgaatttcccatgtcagctt. Outer Right Sequence: cgtattcctggctcttcgag. Inner Left Sequence: ggcaagcatgaaaataggga. Inner Right Sequence: acacttgcgaagccaagaat. Inner Primer PCR Length: 2954. Estimated Deletion Size: about 1400 bp."|"This strain was provided by the C. elegans Gene Knockout Project at the Oklahoma Medical Research Foundation, which was part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use."
Proper citation: RRID:WB-STRAIN:WBStrain00032059 Copy
http://www.wormbase.org/db/get?name=WBStrain00032058
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00007099(trx-2)
Genomic Alteration: WBGene00007099(trx-2)
Availability: available
References:
Synonyms: B0024.9(ok1526) V.
Notes: B0024.9 Homozygous. Outer Left Sequence: tcaattgcaatactcgctgc. Outer Right Sequence: aaaaaggctctcgacgtgaa. Inner Left Sequence: gatatattccaggcggctca. Inner Right Sequence: gcaagaagaagacccagtcg. Inner Primer PCR Length: 2109. Estimated Deletion Size: about 1000 bp.|"Made_by: OMRF Knockout Group"|"Mutagen:UV/TMP"|"This strain was provided by the C. elegans Gene Knockout Project at the Oklahoma Medical Research Foundation, which was part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use."
Proper citation: RRID:WB-STRAIN:WBStrain00032058 Copy
http://www.wormbase.org/db/get?name=WBStrain00032057
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00015514(srlf-1)
Genomic Alteration: WBGene00015514(srlf-1)
Availability: available
References:
Synonyms: C06A8.3(ok1525) II.
Notes: C06A8.3 Homozygous. Outer Left Sequence: ctggtcaacttcagcgaaca. Outer Right Sequence: ttggcactcacatcagaagc. Inner Left Sequence: ggacatccctcatcagtcgt. Inner Right Sequence: gtcctttttcaaatccgcaa. Inner Primer PCR Length: 2211. Estimated Deletion Size: about 1200 bp.|"Made_by: OMRF Knockout Group"|"Mutagen:UV/TMP"|"This strain was provided by the C. elegans Gene Knockout Project at the Oklahoma Medical Research Foundation, which was part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use."
Proper citation: RRID:WB-STRAIN:WBStrain00032057 Copy
http://www.wormbase.org/db/get?name=WBStrain00032052
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00014051(spv-1)
Genomic Alteration: WBGene00014051(spv-1)
Availability: available
References:
Synonyms: spv-1(ok1498) II.
Notes: Made_by: OMRF Knockout Group|"Mutagen:UV/TMP"|"This strain was provided by the C. elegans Gene Knockout Project at the Oklahoma Medical Research Foundation, which was part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use."|"ZK669.1a Homozygous. Outer Left Sequence: atcggtgttggctctacgtc. Outer Right Sequence: aggagctcttccagacacca. Inner Left Sequence: gaaatcctcttctgcggttg. Inner Right Sequence: gagttatgccggtcgaacat. Inner Primer PCR Length: 2929. Estimated Deletion Size: about 1050 bp."
Proper citation: RRID:WB-STRAIN:WBStrain00032052 Copy
http://www.wormbase.org/db/get?name=WBStrain00032061
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00019227(sgca-1)
Genomic Alteration: WBGene00019227(sgca-1)
Availability: available
References:
Synonyms: H22K11.4(ok1529) X.
Notes: H22K11.4 Homozygous. Outer Left Sequence: ttgggcttctattggaccac. Outer Right Sequence: atcaatcaaccccaccacat. Inner Left Sequence: ttccatcggaattccttcac. Inner Right Sequence: tcgaacgtcgaaatcattca. Inner Primer PCR Length: 2341. Estimated Deletion Size: about 1450 bp.|"Made_by: OMRF Knockout Group"|"Mutagen:UV/TMP"|"This strain was provided by the C. elegans Gene Knockout Project at the Oklahoma Medical Research Foundation, which was part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use."
Proper citation: RRID:WB-STRAIN:WBStrain00032061 Copy
http://www.wormbase.org/db/get?name=WBStrain00032068
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00017464(sulp-2)
Genomic Alteration: WBGene00017464(sulp-2)
Availability: available
References:
Synonyms: F14D12.5(ok1554) X.
Notes: F14D12.5 Homozygous. Outer Left Sequence: tttagttacgcgggtatggg. Outer Right Sequence: tgaaaaagttggcaatgcac. Inner Left Sequence: tcttttctggcggcatactt. Inner Right Sequence: ggacttacgatgggcgttta. Inner Primer PCR Length: 2705. Estimated Deletion Size: about 1600 bp.|"Made_by: OMRF Knockout Group"|"Mutagen:UV/TMP"|"This strain was provided by the C. elegans Gene Knockout Project at the Oklahoma Medical Research Foundation, which was part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use."
Proper citation: RRID:WB-STRAIN:WBStrain00032068 Copy
http://www.wormbase.org/db/get?name=WBStrain00032101
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00012480(clec-104)
Genomic Alteration: WBGene00012480(clec-104)
Availability: available
References:
Synonyms: Y18D10A.10(ok1596) I.
Notes: Made_by: OMRF Knockout Group|"This strain was provided by the C. elegans Gene Knockout Project at the Oklahoma Medical Research Foundation, which was part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use."|"Y18D10A.10 Homozygous. Outer Left Sequence: gtttgatgcgggaagttgtt. Outer Right Sequence: tctcgttaggaattggtggc. Inner Left Sequence: aatcccattagcaatctgcg. Inner Right Sequence: cttgaaaacgggggaaaaat. Inner Primer PCR Length: 2308. Estimated Deletion Size: about 1500 bp."
Proper citation: RRID:WB-STRAIN:WBStrain00032101 Copy
http://www.wormbase.org/db/get?name=WBStrain00032100
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00001388(far-4)
Genomic Alteration: WBGene00001388(far-4)
Availability: available
References:
Synonyms: far-4(ok317) V.
Notes: F15B9.2 Homozygous. Outer Left Sequence: acggagaagaaccaagcaga. Outer Right Sequence: ttcaaacgtgtgatgaggga. Inner Left Sequence: ggcggttcaattcttccata. Inner Right Sequence: agagtggtggcattacctcg. Inner Primer PCR Length: 3041. Estimated Deletion Size: about 1000 bp.|"Made_by: OMRF Knockout Group"|"Mutagen:UV/TMP"|"This strain was provided by the C. elegans Gene Knockout Project at the Oklahoma Medical Research Foundation, which was part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use."
Proper citation: RRID:WB-STRAIN:WBStrain00032100 Copy
http://www.wormbase.org/db/get?name=WBStrain00032066
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00022271(cpx-1)
Genomic Alteration: WBGene00022271(cpx-1)
Availability: available
References:
Synonyms: Y73E7A.4(ok1552) I.
Notes: Made_by: OMRF Knockout Group|"Mutagen:UV/TMP"|"This strain was provided by the C. elegans Gene Knockout Project at the Oklahoma Medical Research Foundation, which was part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use."|"Y73E7A.4 Homozygous. Outer Left Sequence: ctcaatagagcgcgatttcc. Outer Right Sequence: gaggggcacggttaattttt. Inner Left Sequence: tcgccatagttttcgctttt. Inner Right Sequence: tttttgatgggtgggaatgt. Inner Primer PCR Length: 2695. Estimated Deletion Size: about 1200 bp."
Proper citation: RRID:WB-STRAIN:WBStrain00032066 Copy
http://www.wormbase.org/db/get?name=WBStrain00032065
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00017464(sulp-2)
Genomic Alteration: WBGene00017464(sulp-2)
Availability: available
References:
Synonyms: F14D12.5(ok1551) X.
Notes: F14D12.5 Homozygous. Outer Left Sequence: tttagttacgcgggtatggg. Outer Right Sequence: tgaaaaagttggcaatgcac. Inner Left Sequence: tcttttctggcggcatactt. Inner Right Sequence: ggacttacgatgggcgttta. Inner Primer PCR Length: 2705. Estimated Deletion Size: about 600 bp.|"Made_by: OMRF Knockout Group"|"Mutagen:UV/TMP"|"This strain was provided by the C. elegans Gene Knockout Project at the Oklahoma Medical Research Foundation, which was part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use."
Proper citation: RRID:WB-STRAIN:WBStrain00032065 Copy
http://www.wormbase.org/db/get?name=WBStrain00032064
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00006864(npr-16)
Genomic Alteration: WBGene00006864(npr-16)
Availability: available
References:
Synonyms: npr-16(ok1541) X.
Notes: F56B6.5 Homozygous. Outer Left Sequence: acaaatcgcaattttccagc. Outer Right Sequence: acaagtccgcaaggtcacat. Inner Left Sequence: caagggtcttcacaatcggt. Inner Right Sequence: tttgatttctcatcgggagg. Inner Primer PCR Length: 3344. Estimated Deletion Size: about 1450 bp.|"Made_by: OMRF Knockout Group"|"Mutagen:UV/TMP"|"This strain was provided by the C. elegans Gene Knockout Project at the Oklahoma Medical Research Foundation, which was part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use."
Proper citation: RRID:WB-STRAIN:WBStrain00032064 Copy
http://www.wormbase.org/db/get?name=WBStrain00032072
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00009824(gpdh-1)
Genomic Alteration: WBGene00009824(gpdh-1)
Availability: available
References:
Synonyms: F47G4.3(ok1558) I.
Notes: F47G4.3 Homozygous. Outer Left Sequence: cccagttgttttggctgaat. Outer Right Sequence: acgttcggttcctgtttcac. Inner Left Sequence: ccctcttcaggattcttccc. Inner Right Sequence: tccgctagatccatttccag. Inner Primer PCR Length: 2578. Estimated Deletion Size: about 1200 bp.|"Made_by: OMRF Knockout Group"|"Mutagen:UV/TMP"|"This strain was provided by the C. elegans Gene Knockout Project at the Oklahoma Medical Research Foundation, which was part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use."|"WBStrain provided so WBPaper00060410 paper added based on AFP_Strain data."
Proper citation: RRID:WB-STRAIN:WBStrain00032072 Copy
http://www.wormbase.org/db/get?name=WBStrain00032036
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00001965(hlh-26)
Genomic Alteration: WBGene00001965(hlh-26)
Availability: available
References:
Synonyms: hlh-26(ok1453) II.
Notes: C17C3.8 Homozygous. Outer Left Sequence: ccagttccgcctgtaacatt. Outer Right Sequence: ttgccacgactggatattga. Inner Left Sequence: actcacctctgcaactgcct. Inner Right Sequence: agtgtcacacgctgagatgg. Inner Primer PCR Length: 2179. Deletion Size: 983 bp. Additional information from Casonya Johnson 3/2005: the deletion is 983 bases, from base 2254 to 3237 on the cosmid C17C3. The gene C17C3.8 is on the opposite strand, and its coding region is from bases 3237 to 3616. The deletion occurs within the second exon of the gene, so that the first 105 amino acids of the protein are still made. This region contains one of the two HLH domains produced by this protein but eliminates the second one. The first stop codon would allow another 19 amino acids to be added to the peptide. I have pasted the sequence below (the red, underlined sequences are the new nucleotides). MSSSPTSSSS GSPSSHGHRS ETEKQRRDDT NDLLNEFKKI VQKSESEKLS KEEVLFRIVK LLSGIQLHHE SFSTSPGPIR SIKKIKSDRE QVRRNKRVAA YRELR tiknkhlehvfnffelki stop|"Made_by: OMRF Knockout Group"|"This strain was provided by the C. elegans Gene Knockout Project at the Oklahoma Medical Research Foundation, which was part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use."
Proper citation: RRID:WB-STRAIN:WBStrain00032036 Copy
http://www.wormbase.org/db/get?name=WBStrain00032035
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00007049(tag-191)
Genomic Alteration: WBGene00007049(tag-191)
Availability: available
References:
Synonyms: C53A5.4(ok1452) V.
Notes: C53A5.4 Homozygous. Outer Left Sequence: cttgcactcattctcaccca. Outer Right Sequence: gacaggctcgaggtgaagtc. Inner Left Sequence: tccgtttttggttccagttc. Inner Right Sequence: ctttgaacacacgtagccga. Inner Primer PCR Length: 2366. Estimated Deletion Size: about 900 bp.|"Made_by: OMRF Knockout Group"|"Mutagen:UV/TMP"|"This strain was provided by the C. elegans Gene Knockout Project at the Oklahoma Medical Research Foundation, which was part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use."
Proper citation: RRID:WB-STRAIN:WBStrain00032035 Copy
http://www.wormbase.org/db/get?name=WBStrain00032032
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00000254(bli-4)|WBGene00002000(hrpr-1)
Genomic Alteration: WBGene00000254(bli-4), WBGene00002000(hrpr-1)
Availability: available
References:
Synonyms: hrpr-1(ok1278) I/ ? hT2 [bli-4(e937) let-?(q782) qIs48] (I;III) ?.
Notes: F58D5.1 Heterozygous. Homozygous lethal deletion chromosome balanced by GFP-marked translocation. Heterozygotes are wild-type with pharyngeal GFP signal, and segregate wild-type GFP+, arrested hT2 aneuploids, and non-GFP ok1278 homozygotes (larval arrest). Homozygous hT2[bli-4 let-? qIs48] inviable. Pick WT GFP and check for correct segregation of progeny to maintain. NOTE: (04/2019) RB1333 was originally described as a homozygous strain carrying an unknown GFP transgene in the background. It was recently reported by a user that the strain is heterozygous for ok1278. Their characterization of the strain found that the deletion is balanced by a GFP-marked balancer, most likely hT2[qIs48], though the identity of the balancer has not been molecularly confirmed. Outer Left Sequence: tccaaatcctgaaaatccca. Outer Right Sequence: cagatcccagttttgcgaat. Inner Left Sequence: ttgtgtgtgcgtccaatttt. Inner Right Sequence: acattccaacggacgtcttc. Inner Primer PCR Length: 3310. Estimated Deletion Size: about 1700 bp.|"F58D5.1 Homozygous. Outer Left Sequence: tccaaatcctgaaaatccca. Outer Right Sequence: cagatcccagttttgcgaat. Inner Left Sequence: ttgtgtgtgcgtccaatttt. Inner Right Sequence: acattccaacggacgtcttc. Inner Primer PCR Length: 3310. Estimated Deletion Size: about 1700 bp."|"Made_by: OMRF Knockout Group"|"Mutagen:UV/TMP"|"This strain was provided by the C. elegans Gene Knockout Project at the Oklahoma Medical Research Foundation, which was part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use."
Proper citation: RRID:WB-STRAIN:WBStrain00032032 Copy
http://www.wormbase.org/db/get?name=WBStrain00032031
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00015062(trx-1)
Genomic Alteration: WBGene00015062(trx-1)
Availability: available
References:
Synonyms: trx-1(ok1449) II.
Notes: B0228.5 Homozygous. Outer Left Sequence: cgccgtggttaacctcttta. Outer Right Sequence: ttatcggacaataggcggac. Inner Left Sequence: ctgttgactcccaacaccct. Inner Right Sequence: ttgcaaaagaaattttcgcc. Inner Primer PCR Length: 2357. Estimated Deletion Size: about 850 bp.|"Made_by: OMRF Knockout Group"|"This strain was provided by the C. elegans Gene Knockout Project at the Oklahoma Medical Research Foundation, which was part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use."
Proper citation: RRID:WB-STRAIN:WBStrain00032031 Copy
http://www.wormbase.org/db/get?name=WBStrain00032039
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00003739(nlp-1)
Genomic Alteration: WBGene00003739(nlp-1)
Availability: available
References:
Synonyms: nlp-1(ok1469) X.
Notes: C01C4.1 Homozygous. Outer Left Sequence: gaaacattgtgctccaccct. Outer Right Sequence: attcagaagcggaaagagca. Inner Left Sequence: gtgcgtacccagagcatttt. Inner Right Sequence: caattgtgtcctccccctaa. Inner Primer PCR Length: 2212. Estimated Deletion Size: about 700 bp.|"Made_by: OMRF Knockout Group"|"This strain was provided by the C. elegans Gene Knockout Project at the Oklahoma Medical Research Foundation, which was part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use."
Proper citation: RRID:WB-STRAIN:WBStrain00032039 Copy
http://www.wormbase.org/db/get?name=WBStrain00032038
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00015308(ddi-1)
Genomic Alteration: WBGene00015308(ddi-1)
Availability: available
References:
Synonyms: C01G5.6(ok1468) IV.
Notes: C01G5.6 Homozygous. Outer Left Sequence: caaacattttgcgtcggaat. Outer Right Sequence: tcggaatttcttgtccgttc. Inner Left Sequence: tccttgtcatcgttttgcac. Inner Right Sequence: tcagcttgaacattgctgct. Inner Primer PCR Length: 2131. Estimated Deletion Size: about 850 bp.|"Made_by: OMRF Knockout Group"|"This strain was provided by the C. elegans Gene Knockout Project at the Oklahoma Medical Research Foundation, which was part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use."
Proper citation: RRID:WB-STRAIN:WBStrain00032038 Copy
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