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Integrated Animals is a virtual database currently indexing available animal strains and mutants from: AGSC (Ambystoma), BCBC (mice), BDSC (flies), European Xenopus Resource Center (frog), The National Xenopus Resource (frog), Xenopus Express (frog), CWRU Cystic Fibrosis Mouse Models (mice), DGGR (flies), FlyBase (flies), IMSR (mice), MGI (mice), MMRRC (mice), NSRRC (pig), RGD (rats), Sperm Stem Cell Libraries for Biological Research (rats), Tetrahymena Stock Center (Tetrahymena), WormBase (worms), XGSC (Xiphophorus), ZFIN (zebrafish), and ZIRC (zebrafish). Note, the IMSR data is linked, but users may need to re-execute the search if the top mouse is not returned properly.
Note: BCBC is no longer in service, so the links may not be functional.
http://www.wormbase.org/db/get?name=WBStrain00031335
Source Database: WormBase (WB)
Genetic Background:
Affected Genes:
Genomic Alteration:
Availability: available
References:
Synonyms: okIs57 X.
Notes: Made_by: Barstead Lab|"okIs57 X. Pharyngeal GFP element integrated near unc-3 Attribution: This strain was provided by the C. elegans Reverse Genetics Core Facility at the University of British Columbia, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use."
Proper citation: RRID:WB-STRAIN:WBStrain00031335 Copy
http://www.wormbase.org/db/get?name=WBStrain00031334
Source Database: WormBase (WB)
Genetic Background:
Affected Genes:
Genomic Alteration:
Availability: available
References:
Synonyms: okIs56 II.
Notes: Made_by: OMRF Knockout Group|"okIs56 II. Integrated pharyngeal GFP. Attribution: This strain was provided by the C. elegans Reverse Genetics Core Facility at the University of British Columbia, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use."
Proper citation: RRID:WB-STRAIN:WBStrain00031334 Copy
http://www.wormbase.org/db/get?name=WBStrain00031388
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00003434(msp-38)
Genomic Alteration: WBGene00003434(msp-38)
Availability: available
References:
Synonyms: msp-38(ok346) IV.
Notes: K08F4.8. Homozygous. Outer Left Sequence: atgctgggtgaaactaacgg. Outer Right Sequence: caaaagcatcgcagaaaaca. Inner Left Sequence: ctggaagttgtccagatggc. Inner Right Sequence: tccggtgtgaaatgtaacga. Inner primer WT PCR product: 2582.|"Made_by: OMRF Knockout Group"|"Mutagen:UV/TMP"|"This strain was provided by the C. elegans Gene Knockout Project at the Oklahoma Medical Research Foundation, which was part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use."
Proper citation: RRID:WB-STRAIN:WBStrain00031388 Copy
http://www.wormbase.org/db/get?name=WBStrain00031386
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00004901(snf-2)
Genomic Alteration: WBGene00004901(snf-2)
Availability: available
References:
Synonyms: snf-2(ok147) I.
Notes: F55H12.1. Homozygous. Outer Left Sequence: CTCCCTACCACGCATTGTTT. Outer Right Sequence: CCACTCCGTCACCCACTACT. Inner Left Sequence: TTGAACGTGGACTTTTCGTG. Inner Right Sequence: TGATATTCGCTCGCAGTGAC. Inner primer WT PCR product: 3669.|"Made_by: OMRF Knockout Group"|"Mutagen:UV/TMP"|"This strain was provided by the C. elegans Gene Knockout Project at the Oklahoma Medical Research Foundation, which was part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use."
Proper citation: RRID:WB-STRAIN:WBStrain00031386 Copy
http://www.wormbase.org/db/get?name=WBStrain00031383
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00004762(sel-5)
Genomic Alteration: WBGene00004762(sel-5)
Availability: available
References:
Synonyms: sel-5(ok363) III.
Notes: F35G12.3A. Homozygous. Outer Left Sequence: CACTGAGCAATTGCCTTTCA. Outer Right Sequence: ATCGCCGAAGGTAGGTTTTT. Inner Left Sequence: CAAACACATCATCCACCACC. Inner Right Sequence: TTTCTTCCAGGTGGATTTGC. Inner primer WT PCR product: 3269.|"Made_by: OMRF Knockout Group"|"Mutagen:UV/TMP"|"This strain was provided by the C. elegans Gene Knockout Project at the Oklahoma Medical Research Foundation, which was part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use."
Proper citation: RRID:WB-STRAIN:WBStrain00031383 Copy
http://www.wormbase.org/db/get?name=WBStrain00031381
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00017222(F07G6.2)
Genomic Alteration: WBGene00017222(F07G6.2)
Availability: available
References:
Synonyms: F07G6.2(ok362) X.
Notes: F07G6.2. Homozygous. Outer Left Sequence: tgcgctgtttagaattgtgc. Outer Right Sequence: ctcattgggcaaagtctggt. Inner Left Sequence: tgcgcagtgttccaataaag. Inner Right Sequence: atccgaaccattgactgagg. Inner primer WT PCR product: 2748.|"Made_by: OMRF Knockout Group"|"Mutagen:UV/TMP"|"This strain was provided by the C. elegans Gene Knockout Project at the Oklahoma Medical Research Foundation, which was part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use."
Proper citation: RRID:WB-STRAIN:WBStrain00031381 Copy
http://www.wormbase.org/db/get?name=WBStrain00031306
Source Database: WormBase (WB)
Genetic Background:
Affected Genes:
Genomic Alteration:
Availability: unknown
References:
Synonyms: Caenorhabditis elegans wild isolate.
Notes: Isotype: QX1794|"Reference_strain: True"|"Sequenced: True"|"WBStrain provided so WBPaper00061063 paper added based on AFP_Strain data."
Proper citation: RRID:WB-STRAIN:WBStrain00031306 Copy
http://www.wormbase.org/db/get?name=WBStrain00031305
Source Database: WormBase (WB)
Genetic Background:
Affected Genes:
Genomic Alteration:
Availability: unknown
References:
Synonyms: Caenorhabditis elegans wild isolate.
Notes: Isotype: QX1793|"Reference_strain: True"|"Sequenced: True"|"WBStrain provided so WBPaper00061063 paper added based on AFP_Strain data."
Proper citation: RRID:WB-STRAIN:WBStrain00031305 Copy
http://www.wormbase.org/db/get?name=WBStrain00031310
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00016713(C46E10.9)
Genomic Alteration: WBGene00016713(C46E10.9)
Availability: available
References:
Synonyms: C46E10.9(tm1692) II.
Notes: Made_by: S. Mitani/E. Large|"tm1692 is a 656 bp deletion and 13 bp insertion. Outcrossed to mC6g males. Reference: Large and Mathies (2010) Dev Biol 339(1):51-64."
Proper citation: RRID:WB-STRAIN:WBStrain00031310 Copy
http://www.wormbase.org/db/get?name=WBStrain00031398
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00001594(glc-4)
Genomic Alteration: WBGene00001594(glc-4)
Availability: available
References:
Synonyms: glc-4(ok212) II.
Notes: C27H5.8. Homozygous. Outer Left Sequence: tcagcaccttcactgattgc. Outer Right Sequence: ttcccgaccactaggtatgc. Inner Left Sequence: cgacacattgtacagacccg. Inner Right Sequence: gcacctccaccacaggttat. Inner primer WT PCR product: 3279.|"Made_by: OMRF Knockout Group"|"Mutagen:UV/TMP"|"This strain was provided by the C. elegans Gene Knockout Project at the Oklahoma Medical Research Foundation, which was part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use."
Proper citation: RRID:WB-STRAIN:WBStrain00031398 Copy
http://www.wormbase.org/db/get?name=WBStrain00031392
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00004359(rhr-2)
Genomic Alteration: WBGene00004359(rhr-2)
Availability: available
References:
Synonyms: rhr-2(ok403) V.
Notes: B0240.1. Homozygous. Outer Left Sequence: CCCGTTTTACCAATCCCTTT. Outer Right Sequence: ATGACACACGACGGACAAAA. Inner Left Sequence: CGAAAGCGAGACTTTCCGTA. Inner Right Sequence: TAACTGCAAGAAAATCGGGG. Inner primer WT PCR product: 3086.|"Made_by: OMRF Knockout Group"|"Mutagen:UV/TMP"|"This strain was provided by the C. elegans Gene Knockout Project at the Oklahoma Medical Research Foundation, which was part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use."
Proper citation: RRID:WB-STRAIN:WBStrain00031392 Copy
http://www.wormbase.org/db/get?name=WBStrain00031318
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00000254(bli-4)|WBGene00015971(swsn-2.2)
Genomic Alteration: WBGene00000254(bli-4), WBGene00015971(swsn-2.2)
Availability: available
References:
Synonyms: swsn-2.2(tm3395) I/hT2 [bli-4(e937) let-?(q782) qIs48] (I;III).
Notes: Homozygous lethal deletion chromosome balanced by hT2. GFP+ heterozygotes are wild-type that segregate wild-type GFP+, arrested hT2 aneuploids, and non-GFP tm3309 homozygotes. tm3395 homozygotes are maternal effect lethal (late embryo & larval lethal) and have progeny with gonadogenesis defects. Pick wild-type GFP+ animals to maintain. Reference: Large EE and Mathies LD (2014 Jan 8). G3, doi: 10.1534/g3.113.009852.
Proper citation: RRID:WB-STRAIN:WBStrain00031318 Copy
http://www.wormbase.org/db/get?name=WBStrain00031317
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00022182(swsn-3)
Genomic Alteration: WBGene00022182(swsn-3)
Availability: available
References:
Synonyms: swsn-3(tm3647) III.
Notes: Homozygous viable, non-Psa (Sawa), no gonadogenesis defects. Reference: Large EE and Mathies LD (2014 Jan 8). G3, doi: 10.1534/g3.113.009852.
Proper citation: RRID:WB-STRAIN:WBStrain00031317 Copy
http://www.wormbase.org/db/get?name=WBStrain00031314
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00001864(him-5)|WBGene00006843(unc-119)
Genomic Alteration: WBGene00001864(him-5), WBGene00006843(unc-119)
Availability: available
References:
Synonyms: unc-119(ed3) III; him-5(e1490) V; rdIs26.
Notes: Made_by: Ed Large|"Mutagen:Gamma radiation"|"rdIs26 [R08E3.4::GFP + unc-119(+)]. Construct contains ~5 kb upstream of R08E3.4A. Superficially wild-type. Reference: Large and Mathies (2010) Dev Biol 339(1):51-64."
Proper citation: RRID:WB-STRAIN:WBStrain00031314 Copy
http://www.wormbase.org/db/get?name=WBStrain00031313
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00001864(him-5)|WBGene00006843(unc-119)
Genomic Alteration: WBGene00001864(him-5), WBGene00006843(unc-119)
Availability: unknown
References:
Synonyms: unc-119(ed3) III; him-5(e1490) V; rdIs25.
Notes: Mutagen:Gamma radiation|"rdIs25 [pRA400; R08E3.4::GFP + unc-119(+)]. Superficially wild-type. Reference: Large and Mathies (2010) Dev Biol 339(1):51-64."
Proper citation: RRID:WB-STRAIN:WBStrain00031313 Copy
http://www.wormbase.org/db/get?name=WBStrain00031312
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00006843(unc-119)
Genomic Alteration: WBGene00006843(unc-119)
Availability: available
References:
Synonyms: unc-119(ed3) III; rdIs24.
Notes: Made_by: Ed Large|"rdIs24 [F12E12.5::GFP + unc-119(+)]. Spontaneous integrant of UL1189. Expresses GFP in somatic gonad during L2-L3 stages. Reference: Large EE, Mathies LD. Dev Biol. 2010 Mar 1;339(1):51-64."
Proper citation: RRID:WB-STRAIN:WBStrain00031312 Copy
http://www.wormbase.org/db/get?name=WBStrain00031485
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00000222(atf-6)
Genomic Alteration: WBGene00000222(atf-6)
Availability: available
References:
Synonyms: atf-6(ok551) X.
Notes: F45E6.2. Homozygous. Outer Left Sequence: GGCGGGAGTTTAGGAGATTC. Outer Right Sequence: AAAGGCACGGAAATTGAGAA. Inner Left Sequence: AATGACCAGGAAATGTGGGA. Inner Right Sequence: AAGTGTCAATTGGCCAGTCC. Inner primer WT PCR product: 2983.|"Made_by: OMRF Knockout Group"|"Mutagen:UV/TMP"|"Supplementary_genotype atf-6(ok551)"|"Supplementary_genotype atf-6(ok551) X"|"This strain was provided by the C. elegans Gene Knockout Project at the Oklahoma Medical Research Foundation, which was part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use."|"WBStrain provided so WBPaper00060933 paper added based on AFP_Strain data."
Proper citation: RRID:WB-STRAIN:WBStrain00031485 Copy
http://www.wormbase.org/db/get?name=WBStrain00031484
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00002037(hum-4)
Genomic Alteration: WBGene00002037(hum-4)
Availability: available
References:
Synonyms: hum-4(ok550) X.
Notes: F46C3.3. Homozygous. Outer Left Sequence: TCTGTACGTTGTGGAGGCTG. Outer Right Sequence: CTGCTTTGCATGTTCTTGGA. Inner Left Sequence: ACTTCCTTTGGCACAACTGG. Inner Right Sequence: ATCGAATTGAACGCTGCTCT. Inner primer WT PCR product: 2848.|"Made_by: OMRF Knockout Group"|"Mutagen:UV/TMP"|"This strain was provided by the C. elegans Gene Knockout Project at the Oklahoma Medical Research Foundation, which was part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use."
Proper citation: RRID:WB-STRAIN:WBStrain00031484 Copy
http://www.wormbase.org/db/get?name=WBStrain00031407
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00001386(far-2)
Genomic Alteration: WBGene00001386(far-2)
Availability: available
References:
Synonyms: far-2(ok435) III.
Notes: F02A9.3. Homozygous. Outer Left Sequence: AATGAGCAATTCAAATGGGC. Outer Right Sequence: CCCTTCTTCCTTCCATCTCC. Inner Left Sequence: CAGTTGCGAAGAATCAGCAG. Inner Right Sequence: TGTGACCCTTTGATAAGCCC. Inner primer WT PCR product: 2989.|"Made_by: OMRF Knockout Group"|"Mutagen:UV/TMP"|"This strain was provided by the C. elegans Gene Knockout Project at the Oklahoma Medical Research Foundation, which was part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use."
Proper citation: RRID:WB-STRAIN:WBStrain00031407 Copy
http://www.wormbase.org/db/get?name=WBStrain00031402
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00000163(apb-3)
Genomic Alteration: WBGene00000163(apb-3)
Availability: available
References:
Synonyms: apb-3(ok429) I.
Notes: Made_by: OMRF Knockout Group|"Mutagen:UV/TMP"|"R11A5.1A. Homozygous. Outer Left Sequence: cgatatgccgaagaacaaca. Outer Right Sequence: caacagaaactcgtgctcca. Inner Left Sequence: tggaagtgctctccgagttt. Inner Right Sequence: tttcccttcacatcgagacc. Inner primer WT PCR product: 2880."|"This strain was provided by the C. elegans Gene Knockout Project at the Oklahoma Medical Research Foundation, which was part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use."
Proper citation: RRID:WB-STRAIN:WBStrain00031402 Copy
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