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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.

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Resource Name Proper Citation Abbreviations Resource Type Description Keywords Resource Relationships Related Condition Funding Defining Citation Availability Website Status Alternate IDs Alternate URLs Old URLs Parent Organization Resource ID Synonyms Record Last Update Mentions Count
Stanford Center for Narcolepsy
 
Resource Report
Resource Website
Stanford Center for Narcolepsy (RRID:SCR_007021) Stanford Center for Narcolepsy biomaterial supply resource, material resource, tissue bank, brain bank The Stanford Center for Narcolepsy was established in the 1980s as part of the Department of Psychiatry and Behavioral Sciences. Today, it is the world leader in narcolepsy research with more than 100 articles on narcolepsy to its name. The Stanford Center for Narcolepsy was the first to report that narcolepsy-cataplexy is caused by hypocretin (orexin) abnormalities in both animal models and humans. Under the direction of Drs. Emmanuel Mignot and Seiji Nishino, the Stanford Center for Narcolepsy today treats several hundred patients with the disorder each year, many of whom participate in various research protocols. Other research protocols are conducted in animal models of narcolespy. We are always looking for volunteers in our narcolepsy research studies. We are presently recruiting narcoleptic patients for genetic studies, drug clinical trials, hypocretin measurement studies in the CSF and functional MRI studies. Monetary gifts to the Center for Narcolepsy are welcome. If you wish to make the ultimate gift, please consider participating in our Brain Donation Program. To advance our understanding of the cause, course, and treatment of narcolepsy, in 2001 Stanford University started a program to obtain human brain tissue for use in narcolepsy research. Donated brains provide an invaluable resource and we have already used previously donated brains to demonstrate that narcolepsy is caused by a lack of a very specific type of cell in the brain, the hypocretin (orexin) neuron. While the brain donations do not directly help the donor, they provide an invaluable resource and a gift to others. The real answers as to what causes or occurrs in the brain when one has narcolepsy will only be definitively understood through the study of brain tissue. Through these precious donations, narcolepsy may eventually be prevented or reversible. We currently are seeking brains from people with narcolepsy (with cataplexy and without), idiopathic hypersomnia and controls or people without a diagnosed sleep disorder of excessive sleepiness. Control brains are quite important to research, as findings must always be compared to tissue of a non-affected person. Friends and loved ones of people who suffer with narcoleps may wish to donate to our program to help fill this very important need. Refer to the Movies tab for movies of Narcolepsy / Cataplexy. brain tissue, brain, tissue, hypocretin, orexin, narcolepsy, sleep disorder, cataplexy, idiopathic hypersomnia, normal control, kleine-levin syndrome, dog, zebrafish, research, therapy is listed by: One Mind Biospecimen Bank Listing
has parent organization: Stanford University School of Medicine; California; USA
Narcolepsy, Sleep disorder, Cataplexy, Idiopathic hypersomnia, Normal control, Kleine-Levin Syndrome Individual gifts ;
NIH
Private: not stated but looks that way nlx_144254 http://med.stanford.edu/school/Psychiatry/narcolepsy/ SCR_007021 Stanford University Center for Narcolepsy 2026-02-14 02:01:25 0
fMRI Data Center
 
Resource Report
Resource Website
10+ mentions
fMRI Data Center (RRID:SCR_007278) fMRIDC data repository, storage service resource, data or information resource, service resource, database THIS RESOURCE IS NO LONGER IN SERVICE, documented August 25, 2013 Public curated repository of peer reviewed fMRI studies and their underlying data. This Web-accessible database has data mining capabilities and the means to deliver requested data to the user (via Web, CD, or digital tape). Datasets available: 107 NOTE: The fMRIDC is down temporarily while it moves to a new home at UCLA. Check back again in late Jan 2013! The goal of the Center is to help speed the progress and the understanding of cognitive processes and the neural substrates that underlie them by: * Providing a publicly accessible repository of peer-reviewed fMRI studies. * Providing all data necessary to interpret, analyze, and replicate these fMRI studies. * Provide training for both the academic and professional communities. The Center will accept data from those researchers who are publishing fMRI imaging articles in peer-reviewed journals. The goal is to serve the entire fMRI community. fmri, cognitive, cortex, mri, talairach, neuroimaging, cognitive neuroscience, brain, structure, function, magnetic resonance, intellect, image collection, data set is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC)
is listed by: Biositemaps
is listed by: re3data.org
has parent organization: University of California at Santa Barbara; California; USA
NSF ;
W. M. Keck Foundation ;
NIMH ;
Sun Microsystems Center of Excellence
PMID:11545705 THIS RESOURCE IS NO LONGER IN SERVICE nif-0000-00025 http://www.fmridc.org/ SCR_007278 The fMRI Data Center 2026-02-14 02:01:20 16
Influenza Research Database (IRD)
 
Resource Report
Resource Website
10+ mentions
Influenza Research Database (IRD) (RRID:SCR_006641) IRD data repository, storage service resource, data analysis service, analysis service resource, data or information resource, production service resource, service resource, database The Influenza Research Database (IRD) serves as a public repository and analysis platform for flu sequence, experiment, surveillance and related data. avian, clinical, genomic, host, influenza, isolate, mammalian, nonhuman, phenotypic, preventive, proteomic, repository, strain, epitope, surveillance, treatment, virus, protein sequence, immune, 3d protein structure, align, blast, short peptide, flu protein, sequence variation, snp, phylogenetic tree, human, 3d spacial image, image, clinical data, clinical, genomic, proteomic, phenotype is recommended by: NIDDK Information Network (dkNET)
is listed by: DataCite
is listed by: re3data.org
is listed by: FAIRsharing
is related to: Los Alamos National Laboratory
is related to: University of California at Davis; California; USA
is related to: Sage Analytica
is related to: J. Craig Venter Institute
has parent organization: University of Texas Southwestern Medical Center; Texas; USA
has parent organization: Los Alamos National Laboratory
has parent organization: Sage Analytica
Influenza virus, Influenza NIAID PMID:17965094 Acknowledgement requested, The community can contribute to this resource DOI:10.25504/FAIRsharing.ws7cgw, nif-0000-21222, DOI:10.35094, DOI:10.17616/R3S634, r3d100011558 https://www.fludb.org/
https://doi.org/10.17616/R3S634
https://doi.org/10.17616/r3s634
https://doi.org/10.35094/
https://dx.doi.org/10.35094/
https://fairsharing.org/10.25504/FAIRsharing.ws7cgw
https://doi.org/10.17616/R3S634
http://www.fludb.org/brc/home.do?decorator=influenza SCR_006641 , Influenza Research Database, IRD 2026-02-14 02:01:13 28
VirusHunter
 
Resource Report
Resource Website
VirusHunter (RRID:SCR_001198) VirusHunter software resource A fully automated and modular software package for mining sequence data to identify sequences of microbial origin. The pipeline was optimized for analysis of data generated by the Roche/454 next-generation sequencing platform but can be applied to longer sequences (Sanger sequencing data or assembled contigs) as well. Microbial sequences are identified on the basis of BLAST alignments and the taxonomic classification of the reference sequence(s) to which a read is aligned. Viruses are the focal point of VirusHunter as released, but it can be easily modified to generate parallel outputs for bacterial or parasitic species. To date, VirusHunter has been applied to thousands of specimens, including human, animal and environmental samples, resulting in the detection of many known and novel viruses. virus, next-generation sequencing, roche, 454, taxonomic classification, alignment, bio.tools is listed by: OMICtools
is listed by: bio.tools
is listed by: Debian
has parent organization: Washington University School of Medicine in St. Louis; Missouri; USA
PMID:24167629 THIS RESOURCE IS NO LONGER IN SERVICE biotools:virushunter, OMICS_02153 https://bio.tools/virushunter SCR_001198 2026-02-14 01:59:55 0
Happy
 
Resource Report
Resource Website
10+ mentions
Happy (RRID:SCR_001395) HAPPY data processing software, data analysis software, source code, software application, software resource THIS RESOURCE IS NO LONGER IN SERVICE. Documented on February 28,2023. Software package for Multipoint QTL Mapping in Genetically Heterogeneous Animals (entry from Genetic Analysis Software) The method is implemented in a C-program and there is now an R version of HAPPY. You can run HAPPY remotely from their web server using your own data (or try it out on the data provided for download). qtl, quantitative trait locus, r, c, gene, genetic, genomic, ansi c, unix, irix, sunos, linux, animal model, trait, map, genotype, phenotype, haplotype, linear regression, data set, qtl mapping is listed by: Genetic Analysis Software
is listed by: Debian
has parent organization: Wellcome Trust Centre for Human Genetics
Wellcome Trust PMID:11050180
DOI:10.1073/pnas.230304397
THIS RESOURCE IS NO LONGER IN SERVICE nlx_152594 http://www.well.ox.ac.uk/~rmott/happy.html https://sources.debian.org/src/r-other-mott-happy.hbrem/ SCR_001395 reconstructing HAPlotYpes 2026-02-14 02:00:00 46
ARK-Genomics: Centre for Functional Genomics
 
Resource Report
Resource Website
10+ mentions
ARK-Genomics: Centre for Functional Genomics (RRID:SCR_002214) ARK Genomics core facility, portal, data or information resource, organization portal, service resource, access service resource, database Portal for studies of genome structure and genetic variation, gene expression and gene function. Provides services including DNA sequencing of model and non-model genomes using both Next Generation and Sanger sequencing , Gene expression analysis using both microarrays and Next Generation Sequencing, High throughput genotyping of SNP and copy number variants, Data collection and analysis supported in-house high performance computing facilities and expertise, Extensive EST clone collections for a number of animal species, all of commercially available microarray tools from Affymetrix, Illumina, Agilent and Nimblegen, Parentage testing using microsatellites and smaller SNP panels. ARK-Genomics has developed network of researchers whom they support through each stage of their genomics research, from grant application, experimental design and technology selection, performing wet laboratory protocols, through to analysis of data often in conjunction with commercial partners. gene expression, farm, function, gene, genetic, animal, dna, genome, genomic, genotype, knowledge base, model, structure, variation, job, comparative genome hybridization, parentage testing, microsatellite is listed by: ScienceExchange
is related to: Roslin Institute Labs and Facilities
has parent organization: Roslin Institute
works with: University of Edinburgh GenePool Next Generation Sequencing and Bioinformatics
BBSRC Free, Freely available nif-0000-20966, SciEx_157 https://genomics.ed.ac.uk/ SCR_002214 ARK Genomics, Roslin Institute ARK-Genomics 2026-02-14 02:00:20 12
Blood Group Antigen Gene Mutation Database
 
Resource Report
Resource Website
Blood Group Antigen Gene Mutation Database (RRID:SCR_002297) BGMUT data repository, storage service resource, data or information resource, service resource, database THIS RESOURCE IS NO LONGER IN SERVICE. Documented on August 23, 2019.BGMUT was database that provided publicly accessible platform for DNA sequences and curated set of blood mutation information. Data Archive are available at ftp://ftp.ncbi.nlm.nih.gov/pub/mhc/rbc/Final Archive. blood, gene, genetic, allele, allelic, alteration, antigen, blood group, human, mutation, genetic variation, non-human animal, orthologous gene, orthologue, phenotype, bio.tools is listed by: bio.tools
is listed by: Debian
has parent organization: NCBI dbRBC
has parent organization: Albert Einstein College of Medicine; New York; USA
has parent organization: Roswell Park Cancer Institute
has parent organization: Medical University of Graz; Graz; Austria
has parent organization: Human Genome Variation Society
Albert Einstein College of Medicine; New York; USA ;
David Opochinsky/Blumenfeld Family Fund ;
NIH
PMID:22084196 THIS RESOURCE IS NO LONGER IN SERVICE. nif-0000-21064, biotools:bgmut https://bio.tools/bgmut http://www.bioc.aecom.yu.edu/bgmut/index.htm, http://www.ncbi.nlm.nih.gov/projects/gv/rbc/xslcgi.fcgi?cmd=bgmut SCR_002297 Blood Group Antigen Gene Mutation Database (BGMUT), BGMUT - Blood Group Antigen Gene Mutation Database 2026-02-14 02:00:22 0
Hematology Centers
 
Resource Report
Resource Website
Hematology Centers (RRID:SCR_015321) portal, resource, data or information resource, organization portal, disease-related portal, topical portal Online portal with thorough information about hematology research centers and cores. Each entry details the center's research aims, its activities and core services, and links to pilot programs. hematology research, online portal, research aims, niddk is listed by: NIDDK Information Network (dkNET)
is affiliated with: NIDDK - National Institute of Diabetes and Digestive and Kidney Diseases
has organization facet: Fred Hutchinson Cancer Research Center Co-operative Center for Excellence in Hematology
has organization facet: Center for Iron and Heme Disorders at the University of Utah
has organization facet: Indiana University Cooperative Center of Excellence in Hematology
has organization facet: Yale Cooperative Center of Excellence in Hematology
has organization facet: Boston Children's Hospital Center of Excellence in Molecular Hematology
Diabetes, digestive disease, kidney disease NIDDK U54 RFA-DK15-021 Available to the research community SCR_015321 2026-02-14 02:03:02 0
George M. O'Brien Kidney Research Core Center - UT Southwestern Medical Center
 
Resource Report
Resource Website
George M. O'Brien Kidney Research Core Center - UT Southwestern Medical Center (RRID:SCR_015293) portal, resource, data or information resource, service resource, access service resource, disease-related portal, topical portal Center whose goal is to generate new animal models to study the pathogenesis and treatment of human kidney diseases and their cardiovascular complications, accelerate the clinical application of discoveries made in renal basic science laboratories, and provide investigators with specialized tools and expertise to study kidney development, physiology, and pathophysiology. kidney research, renal diseases, kidey genetics and disease, physiology is listed by: NIDDK Information Network (dkNET)
has parent organization: University of Texas Southwestern Medical Center; Texas; USA
is parent organization of: George M. O'Brien Kidney Research Core Center - UT Southwestern Medical Center Clinical and Translational Core
is parent organization of: George M. O'Brien Kidney Research Core Center - UT Southwestern Medical Center Animal Models Core
is parent organization of: George M. O'Brien Kidney Research Core Center - UT Southwestern Medical Center Physiology Core
is parent organization of: George M. O'Brien Kidney Research Core Center - UT Southwestern Medical Center Cell Biology and Imaging Core
has organization facet: George M. O'Brien Kidney Research Core Center - UT Southwestern Medical Center Animal Models Core
has organization facet: George M. O'Brien Kidney Research Core Center - UT Southwestern Medical Center Physiology Core
has organization facet: George M. O'Brien Kidney Research Core Center - UT Southwestern Medical Center Cell Biology and Imaging Core
has organization facet: George M. O'Brien Kidney Research Core Center - UT Southwestern Medical Center Clinical and Translational Core
is organization facet of: O'Brien Kidney Centers
kidney disease NIDDK P30DK079328 Available to the research community SCR_015293 2026-02-14 02:02:48 0
Vanderbilt Diabetes Research and Training Center Hormone Assay and Analytical Services Core Facility
 
Resource Report
Resource Website
Vanderbilt Diabetes Research and Training Center Hormone Assay and Analytical Services Core Facility (RRID:SCR_010181) core facility, access service resource, service resource THIS RESOURCE IS NO LONGER IN SERVICE. Documented on October 30,2023. Core facility that supports diabetes, endocrine, and metabolic research across a range of species. Its objective is to provide sensitive, reproducible, and inexpensive analyses of hormones, amino acids, and other relevant chemicals. diabetes, endocrine, hormone, metabolic, chemical analysis is listed by: Eagle I
is listed by: NIDDK Information Network (dkNET)
has parent organization: Vanderbilt University; Tennessee; USA
has parent organization: Vanderbilt Diabetes Research and Training Center
is organization facet of: Vanderbilt Diabetes Research and Training Center
Diabetes NIDDK DK059637;
NIDDK DK020593
THIS RESOURCE IS NO LONGER IN SERVICE nlx_156660 SCR_010181 , Vanderbilt Hormone Assay & Analytical Services Core, Vanderbilt Diabetes Research and Training Center Hormone Assay and Analytical Services Core 2026-02-14 02:07:35 0
Center for EPR Imaging in Vivo Physiology
 
Resource Report
Resource Website
Center for EPR Imaging in Vivo Physiology (RRID:SCR_001410) Center for EPR Imaging in Vivo Physiology biomedical technology research center, training resource Biomedical technology research center that develops instrumentation, analysis techniques, spin probes and spin traps, and methodologies for imaging physiologically relevant aspects of tissue fluids, including high-resolution oxygen maps, with very low frequency electron paramagnetic resonance imaging (EPRI). Novel bridges and high-access, low-field magnet/gradient systems have produced physiologically relevant measurements and accommodate a number of resonant structures. The Center is a consortium between the University of Chicago, the University of Denver, the University of Maryland and Novosibirsk Institute of Organic Chemistry (NIOC), Russia. electron paramagnetic resonance, in vivo, spin probe has parent organization: University of Chicago; Illinois; USA Diseased, Healthy NIBIB 4P41EB002034-17 nlx_152632 SCR_001410 Center for Electron Paramagnetic Resonance (EPR) Imaging in Vivo Physiology, Center for Electron Paramagnetic Resonance Imaging in Vivo Physiology, Very Low Frequency ERP Imaging In Vivo Physiology 2026-02-14 02:07:44 0
Laser Microbeam and Medical Program
 
Resource Report
Resource Website
1+ mentions
Laser Microbeam and Medical Program (RRID:SCR_001409) LAMMP biomedical technology research center, training resource Biomedical technology research center dedicated to the use of lasers and optics in biology and medicine with activities in technological research and development, collaborative research, service, training, and dissemination. One of the primary goals of LAMMP is to facilitate translational research by rapidly moving basic science and technology discoveries from blackboard to benchtop to bedside. This is accomplished by combining state of the art optical technologies with specialized resource facilities for cell and tissue engineering, histopathology, pre-clinical animal models, and clinical care. The resource center has been organized into 3 cores: * Microscopy and Microbeam Technologies (MMT) for high-resolution functional imaging and manipulation of living cells and tissues * Medical Translational Technologies (MTT) for non- and minimally-invasive monitoring, treating, and imaging pre-clinical animal models and human subjects, and * Virtual Photonics Technologies (VPT) for developing computational models and methods that advance the performance of biophotonic technologies, and enhance the information content derived from optical measurements. LAMMP cores contain complementary technologies that are capable of quantitatively characterizing, imaging, and perturbing structure and biochemical function in cells and tissues with scalable resolution and depth sensitivity ranging from micrometers to centimeters. laser, optics, biology, medicine, imaging, microscopy, microbeam, photonics, computational model, cell, tissue has parent organization: University of California at Irvine; California; USA NIBIB P41EB015890 Free, Freely Available nlx_152631 http://lammp.bli.uci.edu/ SCR_001409 2026-02-14 02:07:18 4
Laboratory for Fluorescence Dynamics
 
Resource Report
Resource Website
10+ mentions
Laboratory for Fluorescence Dynamics (RRID:SCR_001437) LFD biomedical technology research center, service resource, access service resource, training resource Biomedical technology research center and training resource that develops novel fluorescence technologies, including instrumentation, methods and software applicable to cellular imaging and the elucidation of dynamic processes in cells. The LFD's main activities are: * Services and Resources: the LFD provides a state-of-the-art laboratory for fluorescence measurements, microscopy and spectroscopy, with technical assistance to visiting scientists. * Research and Development: the LFD designs, tests, and implements advances in the technology of hardware, software, and biomedical applications. * Training and Dissemination: the LFD disseminates knowledge of fluorescence spectroscopic principles, instrumentation, and applications to the scientific community. fluorescence, measurement, microscopy, spectroscopy, biochemistry, cell culture, data analysis, biomolecule, membrane, in-vitro, optical spectroscopy, biological process, tissue culture, fluorescence microscopy, optical and laser technology center has parent organization: University of California at Irvine; California; USA NIGMS 8P41GM103540;
NCRR 5P41RR003155
Restricted nlx_152663 SCR_001437 Laboratory for Fluorescence Dynamics (LFD) 2026-02-14 02:07:27 47
Laboratory of Neuro Imaging
 
Resource Report
Resource Website
50+ mentions
Laboratory of Neuro Imaging (RRID:SCR_001922) LONI biomedical technology resource center, training resource Biomedical technology resource center specializing in novel approaches and tools for neuroimaging. It develops novel strategies to investigate brain structure and function in their full multidimensional complexity. There is a rapidly growing need for brain models comprehensive enough to represent brain structure and function as they change across time in large populations, in different disease states, across imaging modalities, across age and sex, and even across species. International networks of collaborators are provided with a diverse array of tools to create, analyze, visualize, and interact with models of the brain. A major focus of these collaborations is to develop four-dimensional brain models that track and analyze complex patterns of dynamically changing brain structure in development and disease, expanding investigations of brain structure-function relations to four dimensions. anatomic, animal, brain, brain function, brain structure, cerebral metabolism, human, mapping, neurobiological, software, neuroimaging, fmri, mri, neuroimaging, software, brain mapping, computational software, magnetic resonance is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC)
is related to: Wavelet Analysis of Image Registration
is related to: Sub-Volume Thresholding Analysis
is related to: jViewbox
is related to: MultiPhase-SEG
is related to: LONI Java Image I/O Plugins
is related to: DualSurfaceMin
is related to: Charged Fluid Model for Brain Image Segmentation
is related to: MINC/Atlases
has parent organization: University of Southern California Keck School of Medicine; California; USA
is parent organization of: Center for Computational Biology at UCLA
is parent organization of: LONI Visualization Tool
is parent organization of: International Consortium for Brain Mapping
is parent organization of: LONI Provenance Editor
is parent organization of: TetraMetrix
is parent organization of: Synchronized Histological Image Viewing Architecture
is parent organization of: LONI ShapeViewer
is parent organization of: LONI ShapeTools
is parent organization of: FFT Library
is parent organization of: Mouse BIRN Atlasing Toolkit
is parent organization of: MGH-USC Human Connectome Project
is parent organization of: Mouse Connectome Project
is parent organization of: LONI Inspector
is parent organization of: Parkinson's Progression Markers Initiative
is parent organization of: BrainSolution
is parent organization of: BrainGraph Editor
is parent organization of: INVIZIAN
is parent organization of: LONI Brain Parser
is parent organization of: LONI De-identification Debablet
is parent organization of: iTools
is parent organization of: Pipeline Neuroimaging VirtualEnvironment
is parent organization of: MultiTracer
is parent organization of: International Consortium for Brain Mapping
NCRR 5 P41 RR013642 LONI Software License nif-0000-10494 http://www.nitrc.org/projects/loni http://loni.ucla.edu/ SCR_001922 UCLA Laboratory of Neuro Imaging, Laboratory of Neuroimaging, UCLA LONI, USC Laboratory of Neuro Imaging 2026-02-14 02:07:19 58
Center for Magnetic Resonance Research
 
Resource Report
Resource Website
1+ mentions
Center for Magnetic Resonance Research (RRID:SCR_003148) CMRR biomedical technology research center, service resource, access service resource, training resource Biomedical technology research center that focuses on development of unique magnetic resonance (MR) imaging and spectroscopy methodologies and instrumentation for the acquisition of structural, functional, and biochemical information non-invasively in humans, and utilizing this capability to investigate organ function in health and disease. The distinctive feature of this resource is the emphasis on ultrahigh magnetic fields (7 Tesla and above), which was pioneered by this BTRC. This emphasis is based on the premise that there exists significant advantages to extracting biomedical information using ultrahigh magnetic fields, provided difficulties encountered by working at high frequencies corresponding to such high field strengths can be overcome by methodological and engineering solutions. This BTRC is home to some of the most advanced MR instrumentation in the world, complemented by human resources that provide unique expertise in imaging physics, engineering, and signal processing. No single group of scientists can successfully carry out all aspects of this type of interdisciplinary biomedical research; by bringing together these multi-disciplinary capabilities in a synergistic fashion, facilitating these interdisciplinary interactions, and providing adequate and centralized support for them under a central umbrella, this BTRC amplifies the contributions of each of these groups of scientists to basic and clinical biomedical research. Collectively, the approaches and instrumentation developed in this BTRC constitute some of the most important tools used today to study system level organ function and physiology in humans for basic and translational research, and are increasingly applied world-wide. CMRR Faculty conducts research in a variety of areas including: * High field functional brain mapping in humans; methodological developments, mechanistic studies, and neuroscience applications * Metabolism, bioenergetics, and perfusion studies of human pathological states (tumors, obesity, diabetes, hepatic encephalopathy, cystic fibrosis, and psychiatric disorders) * Cardiac bioenergetics under normal and pathological conditions * Automated magnetic field shimming methods that are critical for spectroscopy and ultrafast imaging at high magnetic fields * Development of high field magnetic resonance imaging and spectroscopy techniques for anatomic, physiologic, metabolic, and functional studies in humans and animal models * Radiofrequency (RF) pulse design based on adiabatic principles * Development of magnetic resonance hardware for high fields (e.g. RF coils, pre-amplifiers, digital receivers, phased arrays, etc.) * Development of software for data analysis and display for functional brain mapping. mri, imaging, magnetic resonance spectroscopy, clinical, core facility, in vivo, brain mapping has parent organization: University of Minnesota Twin Cities; Minnesota; USA NCRR ;
NIH Blueprint for Neuroscience Research ;
NIBIB ;
W. M. Keck Foundation
Free, Freely available nif-0000-00563 SCR_003148 NMR Imaging and Localized Spectroscopy 2026-02-14 02:07:20 5
CU Denver Advanced Histology Services
 
Resource Report
Resource Website
CU Denver Advanced Histology Services (RRID:SCR_012286) CU Denver Advanced Histology Services core facility, access service resource, service resource The objective of the Morphology and Phenotyping Core - Advanced Histology Services, is to provide Investigators/clients with the tools and expertise to process and analyze tissue samples. The Core is able to process any type of animal and/or human tissue for research purposes. Our technicians are also highly trained in dermatology and delicate specimen handling. We consistently maintain the highest-quality results by utilizing state-of-the-art equipment and employing nationally-certified technicians. Our aim is to always provide excellent customer service by fulfilling each Investigators/clients'''' specific needs and wants. Core services include recommendations for tissue harvesting and storage, preparation of paraffin blocks, sectioning of paraffin and frozen blocks, standard H&E histology, special staining procedures, and control slide preparation. morphology, phenotyping is listed by: ScienceExchange
is related to: University of Colorado Denver Labs and Facilities
has parent organization: University of Colorado Denver; Colorado; USA
SciEx_11340 SCR_012286 University of Colorado Denver Advanced Histology Services 2026-02-14 02:08:19 0
University of Alabama at Birmingham Diabetes Research Center Animal Physiology Core Facility
 
Resource Report
Resource Website
University of Alabama at Birmingham Diabetes Research Center Animal Physiology Core Facility (RRID:SCR_015110) core facility, access service resource, service resource Core that provides diabetes researches with diabetes related phenotyping in small animal models. Their services offered include the assessment of body composition, energy balance, glucose homeostasis, cardiovascular assessment, imaging, and transgenic animals models. ABRF, animal physiology, phenotyping, transgenetics, diabetes, phenotyping, small animal models, assessment of body composition, energy balance, glucose homeostasis, transgenic animals models, is listed by: NIDDK Information Network (dkNET)
is listed by: ABRF CoreMarketplace
has parent organization: University of Alabama at Birmingham; Alabama; USA
has parent organization: University of Alabama at Birmingham Diabetes Research Center
is organization facet of: University of Alabama at Birmingham Diabetes Research Center
Diabetes NIDDK DK079626 Open ABRF_2971 https://coremarketplace.org/?FacilityID=2971&citation=1 SCR_015110 Animal Physiology Core 2026-02-14 02:08:34 0
Texas Medical Center Digestive Diseases Center Functional Genomics and Microbiome
 
Resource Report
Resource Website
Texas Medical Center Digestive Diseases Center Functional Genomics and Microbiome (RRID:SCR_015214) core facility, access service resource, service resource, resource Core whose services include consultation in the choice of genomics methodologies to be applied to research problems being addressed by Digestive Diseases Center members, training in the conduct of functional genomics and metagenomics relevant to GI research, providing mammalian gene expression, cytokine/transcription factor/signaling pathway arrays, and gut microbial profiling/metagenomics to DDC members at discounted prices, and conducting periodic workshops and disseminating information about new technologies available in the Core and to obtain feedback on needed technologies / services. intestine and liver infections, genomics, GI research, microbiome, gene expression (mRNA) is listed by: NIDDK Information Network (dkNET)
has parent organization: Texas Medical Center Digestive Diseases Center
is organization facet of: Texas Medical Center Digestive Diseases Center
digestive disease NIDDK P30DK056338 Available to the Digestive Diseases Center community SCR_015214 2026-02-14 02:08:26 0
Fred Hutchinson Cancer Research Center Co-operative Center for Excellence in Hematology Comparative Medicine
 
Resource Report
Resource Website
Fred Hutchinson Cancer Research Center Co-operative Center for Excellence in Hematology Comparative Medicine (RRID:SCR_015326) core facility, access service resource, service resource THIS RESOURCE IS NO LONGER IN SERVICE.Documented on July 27,2022. Core facility that provides a variety of animal housing, veterinary and research support services. comparative medicine, animal housing, veterinanary resource is listed by: NIDDK Information Network (dkNET)
has parent organization: Fred Hutchinson Cancer Center
is organization facet of: Fred Hutchinson Cancer Research Center Co-operative Center for Excellence in Hematology
cancer NIDDK P30DK056465 THIS RESOURCE IS NO LONGER IN SERVICE SCR_015326 2026-02-14 02:07:56 0
George M. O'Brien Kidney Center at Yale Renal Physiology Core
 
Resource Report
Resource Website
George M. O'Brien Kidney Center at Yale Renal Physiology Core (RRID:SCR_015296) core facility, access service resource, service resource, resource Core provides specialized services and training for assessing renal function in small animals at the level of single tubules in vitro and in vivo (e.g. micropuncture, microperfusion, and tubule-specific microdissection), the whole kidney (e.g. clearance studies in anesthetized animals, perfusion fixation for histology studies), and the intact organism (e.g. balance studies in metabolic cages, acute and chronic BP measurements). phenotyping assays, renal physiology, microperfusion is listed by: NIDDK Information Network (dkNET)
has parent organization: George M. O'Brien Kidney Center at Yale
has parent organization: Yale School of Medicine; Connecticut; USA
is organization facet of: George M. O'Brien Kidney Center at Yale
NIDDK P30DK079310 Available to the research community SCR_015296 2026-02-14 02:07:56 0

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  1. SPARC Anatomical Working Group Resources

    Welcome to the SPARC SAWG Resources search. From here you can search through a compilation of resources used by SPARC SAWG and see how data is organized within our community.

  2. Navigation

    You are currently on the Community Resources tab looking through categories and sources that SPARC SAWG has compiled. You can navigate through those categories from here or change to a different tab to execute your search through. Each tab gives a different perspective on data.

  3. Logging in and Registering

    If you have an account on SPARC SAWG then you can log in from here to get additional features in SPARC SAWG such as Collections, Saved Searches, and managing Resources.

  4. Searching

    Here is the search term that is being executed, you can type in anything you want to search for. Some tips to help searching:

    1. Use quotes around phrases you want to match exactly
    2. You can manually AND and OR terms to change how we search between words
    3. You can add "-" to terms to make sure no results return with that term in them (ex. Cerebellum -CA1)
    4. You can add "+" to terms to require they be in the data
    5. Using autocomplete specifies which branch of our semantics you with to search and can help refine your search
  5. Collections

    If you are logged into SPARC SAWG you can add data records to your collections to create custom spreadsheets across multiple sources of data.

  6. Facets

    Here are the facets that you can filter the data by.

  7. Further Questions

    If you have any further questions please check out our FAQs Page to ask questions and see our tutorials. Click this button to view this tutorial again.