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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.

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Resource Name Proper Citation Abbreviations Resource Type Description Keywords Resource Relationships Related Condition Funding Defining Citation Availability Website Status Alternate IDs Alternate URLs Old URLs Parent Organization Resource ID Synonyms Record Last Update Mentions Count
OpenFeeder
 
Resource Report
Resource Website
OpenFeeder (RRID:SCR_021552) data or information resource, project portal, portal, instrument resource Project related to studying reward and feeding behavior. Provides open source automatic feeding system that can be customized for food types from seeds to pellets.System integrates plexiglass tubes, Arduino Uno, motor driver, and piezo sensor to reliably deliver accurate amounts of food, and can also be built using 3D printed parts. Instrument, automatic feeding system, customized for food types, plexiglass tubes, Arduino Uno, motor driver, piezo sensor, deliver accurate amounts of food, 3D printed parts, OpenBehavior is listed by: OpenBehavior DOI:10.1016/j.ohx.2016.09.001 Free, Freely available SCR_021552 2026-02-15 09:22:32 0
ToneBox
 
Resource Report
Resource Website
ToneBox (RRID:SCR_021548) data or information resource, project portal, portal, instrument resource Project related to auditory behavioral task data collection.Provided high throughput operant conditioning in mouse homecage system was developed by University of Maryland,College Park, scientists.Automated system for training up to hundreds of mice in auditory behavioral task features custom Matlab GUI running on desktop which connects to Raspberry Pi to administer auditory stimuli from USB soundcard and collects auditory data as well as licking data from water spout with commercially available capacitive sensors. Parts list and build instructions are readily available from paper and associated GitHub repository. Instrument, auditory behavioral task, automated system, training mice, auditory behavioral task, OpenBehavior is listed by: OpenBehavior
has parent organization: University of Maryland; Maryland; USA
DOI:10.1523/eneuro.0121-19.2019 Free, Freely available SCR_021548 2026-02-15 09:22:37 0
Quantifying Animal Movement from Pre-recorded Videos
 
Resource Report
Resource Website
Quantifying Animal Movement from Pre-recorded Videos (RRID:SCR_021515) STL software application, image processing software, data processing software, software resource, image analysis software, software toolkit Software toolbox for visualizing and quantifying movement from pre-recorded videos.Used for summarizing animal movement data as single image ( spectral time lapse algorithm) as well as automate analysis of animal movement data. Visualizing movement, quantifying movement, pre-recorded videos movement, summarizing animal movement data, single image, automate analysis, animal movement data, movement tracking, path analysis, video visualization, video summarization, image analysis, OpenBehavior is listed by: OpenBehavior
is related to: Quantifying Animal Movement from Pre-recorded Videos project
DOI:10.12688/f1000research.3-19.v1 Free, Available for download, Freely Available https://edspace.american.edu/openbehavior/project/offline-behavior-video-analysis/ SCR_021515 Spectral Time Lapse, STL Toolbox 2026-02-15 09:22:31 0
Platform for Acoustic STArtle
 
Resource Report
Resource Website
Platform for Acoustic STArtle (RRID:SCR_021516) ratPASTA software application, data processing software, software resource, data visualisation software, software toolkit Software package for processing and visualising data from startle experiments in rodents or experiments measuring grip strength in rodents. Startle experiments, rodent, experiments measuring rodents grip strength, OpenBehavior is listed by: OpenBehavior
is related to: Platform for Acoustic STArtle project
DOI:10.1038/s41598-021-82710-6 Free, Available for download, Freely Available https://edspace.american.edu/openbehavior/project/pasta/
https://github.com/ikodvanj/ratPASTA/
SCR_021516 Platform for Acoustic STArtle 2026-02-15 09:22:36 0
FaceMap
 
Resource Report
Resource Website
10+ mentions
FaceMap (RRID:SCR_021513) software application, data processing software, data analysis software, software resource Software toolbox for unsupervised video analysis of rodent behavior.Used for videographic processing of head fixed rodent behavior. Unsupervised video analysis, rodent behavior, videographic processing, head fixed rodent behavior, head fixed rodent, OpenBehavior is listed by: OpenBehavior
is related to: FaceMap project
Free, Available for download, Freely Available https://edspace.american.edu/openbehavior/project/facemap/ SCR_021513 2026-02-15 09:22:06 19
Skinner Box
 
Resource Report
Resource Website
Skinner Box (RRID:SCR_021514) software application, data processing software, software resource, data acquisition software, data analysis software Software tool for data logging and analysis. Open Skinner Box, data logging, data analysis, behavioral system, OpenBehavior is listed by: OpenBehavior
is related to: Skinner Box project
Free, Available for download, Freely Available https://edspace.american.edu/openbehavior/project/open-skinner-box/ SCR_021514 2026-02-15 09:22:37 0
Ratcave
 
Resource Report
Resource Website
Ratcave (RRID:SCR_021599) software library, software toolkit, software resource Software 3D graphics python package for cognitive psychology experiments. Open source, cross platform Python library that adds 3D stimulus support to all OpenGL-based 2D Python stimulus libraries. These libraries include VisionEgg, Psychopy, Pyglet, and PyGam. Stimuli to subjects, response record, Python, 3D graphics library, 3D stimulus support, OpenBehavior is listed by: OpenBehavior
is related to: Ratcave project
DOI:10.3758/s13428-019-01245-x Free, Available for download, Freely Available https://edspace.american.edu/openbehavior/project/ratcave/ SCR_021599 2026-02-15 09:22:38 0
Bonsai
 
Resource Report
Resource Website
1+ mentions
Bonsai (RRID:SCR_021512) software application, data processing software, data acquisition software, software resource Software tool as event based framework for processing and controlling data streams. Open source software tool as visual language for reactive programming.Used for composing reactive and asynchronous data streams coming from video cameras, microphones, electrophysiology systems or data acquisition boards. Reactive programming visual language, composing reactive data streams, composing asynchronous data streams, video cameras data, microphones data, electrophysiology systems data, data acquisition boards, OpenBehavior is listed by: OpenBehavior
is related to: Bonsai project
DOI:10.3389/fninf.2015.00007 Free, Available for download, Freely Available https://edspace.american.edu/openbehavior/project/bonsai/ SCR_021512 2026-02-15 09:22:36 8
Rigbox
 
Resource Report
Resource Website
1+ mentions
Rigbox (RRID:SCR_021517) data management software, software application, software resource Open source software MATLAB toolbox for running behavioral neuroscience experiments and managing data.Used for probing neurons and behavior. Used for managing behavioral neuroscience experiments and acquiring experiment related data. Managing behavioral neuroscience experiments, running behavioral neuroscience experiments, managing data, acquiring experiment related data, OpenBehavior is listed by: OpenBehavior
is related to: Rigbox project
DOI:10.1523/eneuro.0406-19.2020 Free, Available for download, Freely Available https://edspace.american.edu/openbehavior/project/rigbox/ SCR_021517 2026-02-15 09:22:06 5
MNE Scan
 
Resource Report
Resource Website
1+ mentions
MNE Scan (RRID:SCR_021530) software application, data processing software, data acquisition software, software resource Software tool for real time processing of electrophysiological data. Electrophysiological data processing, medical regulatory requirements, build standalone applications, MEG data acquisition, MEG data processing, EEG data acquisition, MEG data acquisition, OpenBehavior is listed by: OpenBehavior
is related to: MNE Scan project
DOI:10.1016/j.jneumeth.2018.03.020 Free, Available for download, Freely Available https://edspace.american.edu/openbehavior/project/mne-scan/ SCR_021530 2026-02-15 09:22:37 1
Ardbark project
 
Resource Report
Resource Website
Ardbark project (RRID:SCR_021494) data or information resource, project portal, portal, instrument resource Project related to fear conditioning studies.Includes hardware and software tools. Provides Arduino based device for producing naturalistic stimuli which can be integrated with existing commercial operant chambers with few modifications.. Stores custom made .wav files on SD card, interfaces with Med System and plays the .wav files through ceiling mounted speakers. Arduino based device, naturalistic stimuli, behavioral response, OpenBehavior, Instrument is listed by: OpenBehavior Free, Freely available SCR_021494 Ardbark 2026-02-15 09:22:30 0
Novel Gustometer for Human Taste Research project
 
Resource Report
Resource Website
Novel Gustometer for Human Taste Research project (RRID:SCR_021495) data or information resource, project portal, portal, instrument resource Project related to taste sensory system research in humans on behavioral, electrophysiological and hemodynamic activity levels.Provided system includes hardware and software tools. Gustometer, taste sensory system, behavioral activity level, electrophysiological activity level, hemodynamic activity level, OpenBehavior, Instrument is listed by: OpenBehavior DOI:10.3758/s13428-018-1145-1 Free, Freely available SCR_021495 Novel Gustometer for Human Taste Research 2026-02-15 09:22:36 0
Home Cage Automated Skilled Reaching Apparatus project
 
Resource Report
Resource Website
Home Cage Automated Skilled Reaching Apparatus project (RRID:SCR_021492) HASRA data or information resource, project portal, portal, instrument resource Project includes system for individualized training of group housed mice in single pellet reaching task.System allows user to host up to 5 mice in their home environment and automatically administer single pellet reaching test to those animals.Platform for training and assessing skilled reaching in mice with minimal need for experimenter handling. Individualized training, group housed mice, single pellet reaching task, assessing skilled reaching in mice, OpenBehavior, Instrument is listed by: OpenBehavior DOI:10.1523/eneuro.0242-20.2020 Free, Freely available SCR_021492 Home Cage Automated Skilled Reaching Apparatus 2026-02-15 09:22:05 0
Optimouse
 
Resource Report
Resource Website
1+ mentions
Optimouse (RRID:SCR_021527) software application, data processing software, data analysis software, software resource Software tool for analysis of mouse position data.Open source software to analyze positions of individual mice, specifically their nose positions, in behavioral arena with the goal of minimizing error. Mouse position data analysis, mouse position, position data, nose position, OpenBehavior is listed by: OpenBehavior
is related to: Optimouse project
DOI:10.1186/s12915-017-0377-3 Free, Available for download, Freely Available https://edspace.american.edu/openbehavior/project/optimouse/ SCR_021527 2026-02-15 09:22:31 2
DIY-NAMIC project
 
Resource Report
Resource Website
DIY-NAMIC project (RRID:SCR_021489) data or information resource, project portal, portal, instrument resource Project is related to measurement of complex phenotypes in homecage. Homecage automated open source behavioral testing sytem to enable high throughput 24h testing of many standard operant paradigms. Using Arduino platform and easily sourced inexpensive components system can display light cues and dispense liquid rewards and has nosepoke receptacles with infrared detectors for operant responses, within homecage.Method provided by Dartmouth College scientists. Behavioral testing system, homecage, Arduino platform, dispense liquid rewards, nosepoke receptacles, infrared detectors, OpenBehavior, Instrument is listed by: OpenBehavior
has parent organization: Dartmouth College; New Hampshire; USA
DOI:10.1523/eneuro.0160-20.2020 Free, Freely available SCR_021489 DIY-NAMIC 2026-02-15 09:22:36 0
linear actuator
 
Resource Report
Resource Website
linear actuator (RRID:SCR_021613) source code, software resource Code and model files for open source linear actuator. Part of Pearce Lab Syringe Pump system. Pearce Lab Syringe Pump, OpenBehavior is listed by: OpenBehavior
is related to: Pearce Lab Syringe Pump project
DOI:10.1371/journal.pone.0107216 Free, Available for download, Freely Available https://edspace.american.edu/openbehavior/project/syringe-pump/ SCR_021613 linear-actuator 2026-02-15 09:22:38 0
Rodent Operant Bucket
 
Resource Report
Resource Website
Rodent Operant Bucket (RRID:SCR_021610) source code, software resource Software tool as ROBucket source code. ROBucket, OpenBehavior is listed by: OpenBehavior
is related to: Rodent Operant Bucket project
DOI:10.3758/s13428-015-0603-2 Free, Available for download, Freely Available https://edspace.american.edu/openbehavior/project/robucket/ SCR_021610 2026-02-15 09:22:33 0
chendoscope
 
Resource Report
Resource Website
chendoscope (RRID:SCR_021616) source code, software resource Software tool as part of CHEndoscope. Acquisition software that interfaces with CHEndoscope Ximea USB camera. This code is compatible with Linux and Windows systems. Acquisition software, CHEndoscope Ximea USB camera, OpenBehavior is listed by: OpenBehavior
is related to: CHEndoscope
DOI:10.1002/cpns.51 Free, Available for download, Freely Available https://edspace.american.edu/openbehavior/project/chendoscope/ SCR_021616 2026-02-15 09:22:39 0
AutoHeadFix
 
Resource Report
Resource Website
AutoHeadFix (RRID:SCR_021617) source code, software resource Software Python code for automated control of behavioural apparatus and imaging for mice in home cage environment.Part of Homecage Task Training and Mesoscale Imaging system. Automated control, behavioural apparatus, imaging for mice, home cage environment, OpenBehavior is listed by: OpenBehavior
is related to: Homecage Task Training and Mesoscale Imaging project
DOI:10.7554/elife.55964 Free, Available for download, Freely Available https://edspace.american.edu/openbehavior/project/training-mesoscale-imaging/ SCR_021617 2026-02-15 09:22:33 0
craniobot
 
Resource Report
Resource Website
craniobot (RRID:SCR_021609) source code, software toolkit, software resource Software tool as part of Craniobot system.Generates, sends, and receives commands to communicate with the Craniobot. Software resource, OpenBehavior is listed by: OpenBehavior
is related to: Craniobot project
DOI:10.1038/s41598-018-37073-w Free, Available for download, Freely Available https://edspace.american.edu/openbehavior/project/craniobot/ SCR_021609 craniobot 2026-02-15 09:22:39 0

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