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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Fire Ontology Resource Report Resource Website |
Fire Ontology (RRID:SCR_010320) | FIRE | data or information resource, ontology, controlled vocabulary | Ontology to represent the set of concepts about the fire occurring in natural vegetation, its characteristics, causes and effects, with focus on Cerrado vegetation domain. The fire plays a determinant role on the structure and composition of Cerrado physiognomies. | owl | is listed by: BioPortal | nlx_157404 | SCR_010320 | 2026-02-14 02:01:44 | 0 | |||||||||
|
Flora Phenotype Ontology Resource Report Resource Website |
Flora Phenotype Ontology (RRID:SCR_010321) | FLOPO | data or information resource, ontology, controlled vocabulary | Ontology generated from the Flora Malesiana, Flora Gabon, Flora of Central Africa, and a collection of Kew''s African Floras. Every class in the ontology has at least one taxon annotation. This is the pre-classified version of the ontology; the original OWL file is at http://jagannath.pdn.cam.ac.uk/plant/flopo-unclassified.owl | owl | is listed by: BioPortal | nlx_157406 | http://wiki.pro-ibiosphere.eu/wiki/Traits_Task_Group | SCR_010321 | 2026-02-14 02:01:56 | 0 | ||||||||
|
BioModels Ontology Resource Report Resource Website |
BioModels Ontology (RRID:SCR_010125) | BIOMODELS | data or information resource, ontology, controlled vocabulary | OWL Representation of the models in the BioModels repository. | owl | is listed by: BioPortal | nlx_157326 | https://code.google.com/p/sbmlharvester/ | SCR_010125 | 2026-02-14 02:01:43 | 0 | ||||||||
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Autism Spectrum Disorder Phenotype Ontology Resource Report Resource Website |
Autism Spectrum Disorder Phenotype Ontology (RRID:SCR_010006) | ASDPTO | data or information resource, ontology, controlled vocabulary | Ontology that encapsulates the Autism Spectrum Disorder behavioral phenotype, informed by the standard ASD assessment instruments and the currently known characteristics of this disorder. | owl, phenotype, behavior | is listed by: BioPortal | Autism Spectrum Disorder | PMID:24163114 | nlx_157322 | http://purl.bioontology.org/ontology/ASDPTO | SCR_010006 | 2026-02-14 02:01:54 | 0 | ||||||
|
International Classification of Primary Care Resource Report Resource Website |
International Classification of Primary Care (RRID:SCR_010262) | ICPC | data or information resource, ontology, controlled vocabulary | Ontology of the international classification of primary care (ICPC). Denmark: World Organisation of Family Doctors, 1993. | umls | is listed by: BioPortal | nlx_157453 | SCR_010262 | 2026-02-14 02:01:55 | 0 | |||||||||
|
International Classification of Diseases Version 9 - Clinical Modification Resource Report Resource Website |
International Classification of Diseases Version 9 - Clinical Modification (RRID:SCR_010104) | ICD9CM | data or information resource, ontology, controlled vocabulary | Ontology of the international standard diagnostic classification for all general epidemiological, many health management purposes and clinical use. | umls | is listed by: BioPortal | nlx_157451 | SCR_010104 | 2026-02-14 02:01:55 | 0 | |||||||||
|
Biological Imaging Methods Ontology Resource Report Resource Website 1+ mentions |
Biological Imaging Methods Ontology (RRID:SCR_010235) | FBbi | data or information resource, ontology, controlled vocabulary | A structured controlled vocabulary of sample preparation, visualization and imaging methods used in biomedical research. | obo |
is listed by: BioPortal has parent organization: Cell Image Library (CIL) |
nlx_157334 | SCR_010235 | 2026-02-14 02:01:55 | 1 | |||||||||
|
International Classification of Functioning Disability and Health Resource Report Resource Website |
International Classification of Functioning Disability and Health (RRID:SCR_010239) | ICF | data or information resource, ontology, controlled vocabulary | A classification of health and health-related domains. These domains are classified from body, individual and societal perspectives by means of two lists: a list of body functions and structure, and a list of domains of activity and participation. Since an individual''s functioning and disability occurs in a context, the ICF also includes a list of environmental factors. | owl | is listed by: BioPortal | nlx_157452 | SCR_010239 | 2026-02-14 02:01:54 | 0 | |||||||||
|
Upper-Level Cancer Ontology Resource Report Resource Website |
Upper-Level Cancer Ontology (RRID:SCR_010443) | CANONT | data or information resource, ontology, controlled vocabulary | Upper-level ontology for cancer. | obo | is listed by: BioPortal | Cancer | nlx_157620 | SCR_010443 | 2026-02-14 02:01:58 | 0 | ||||||||
|
Gene Expression Ontology Resource Report Resource Website 1+ mentions |
Gene Expression Ontology (RRID:SCR_010326) | GEXO | data or information resource, ontology, controlled vocabulary | An application ontology for the domain of gene expression. The ontology integrates fragments of GO and MI with data from GOA, IntAct, UniProt, NCBI, KEGG and orthology relations. | obo | is listed by: BioPortal | nlx_157413 | SCR_010326 | 2026-02-14 02:01:57 | 6 | |||||||||
|
Web-Service Interaction Ontology Resource Report Resource Website |
Web-Service Interaction Ontology (RRID:SCR_010448) | WSIO | data or information resource, ontology, controlled vocabulary | Ontology that enables automated interaction with more complex Web services that are typical for example within life sciences. WSIO is however independent of the application domain and relevant for both SOAP and REST Web services, and for batch execution engines in general. If the interaction scenario with a Web service is nontrivial (and incorporates session handling), annotation with WSIO concepts will enable automatic generation of client programs, scripts, or interactive applications with a graphical user interface. WSIO also enables automation of different ways of data transfer and data un-/compression or en-/decoding. They strongly discourage providers from developing complex interaction and data-transfer/compression scenarios, however when needed, WSIO may enable smooth automated interaction with them. Future versions will support more interaction scenarios. WSIO aims to serve also as a means to standardise the complex interaction scenarios primarily within both SOAP and REST Web services, and secondarily to apply also to batch execution infrastructure in general. | obo | is listed by: BioPortal | nlx_157629 | SCR_010448 | 2026-02-14 02:02:00 | 0 | |||||||||
|
General Formal Ontology Resource Report Resource Website |
General Formal Ontology (RRID:SCR_010328) | GFO | data or information resource, ontology, controlled vocabulary | A top-level ontology integrating objects and processes. | owl | is listed by: BioPortal | nlx_157416 | http://www.onto-med.de/ontologies/gfo/ | SCR_010328 | 2026-02-14 02:01:44 | 0 | ||||||||
|
Wheat Trait Ontology Resource Report Resource Website |
Wheat Trait Ontology (RRID:SCR_010449) | CO-WHEAT | data or information resource, ontology, controlled vocabulary | Ontology that defines traits of the International Wheat Information System (IWIS) database and wheat descriptor. | obo | is listed by: BioPortal | nlx_157630 | SCR_010449 | 2026-02-14 02:02:00 | 0 | |||||||||
|
General Formal Ontology for Biology Resource Report Resource Website |
General Formal Ontology for Biology (RRID:SCR_010329) | GFO-BIO | data or information resource, ontology, controlled vocabulary | A biological core ontology built on the General Formal Ontology. | owl | is listed by: BioPortal | nlx_157417 | http://www.onto-med.de/ontologies/gfo-bio/ | SCR_010329 | 2026-02-14 02:01:56 | 0 | ||||||||
|
XEML Environment Ontology Resource Report Resource Website |
XEML Environment Ontology (RRID:SCR_010450) | XEO | data or information resource, ontology, controlled vocabulary | Ontology to help plant scientists in documenting and sharing metadata describing the abiotic environment. | obo | is listed by: BioPortal | nlx_157631 | SCR_010450 | 2026-02-14 02:01:46 | 0 | |||||||||
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Genome Component Ontology Resource Report Resource Website 1+ mentions |
Genome Component Ontology (RRID:SCR_010330) | GCO | data or information resource, ontology, controlled vocabulary | Ontology to define the abstract division of the total genetic information of an organism by its physical separation into different components, thereby providing a high level reference point to which more specific descriptions of the characteristics of these components can be linked. | owl | is listed by: BioPortal | nlx_157418 | SCR_010330 | 2026-02-14 02:01:57 | 1 | |||||||||
|
Situation-Based Access Control Ontology Resource Report Resource Website |
Situation-Based Access Control Ontology (RRID:SCR_010429) | SITBAC | data or information resource, ontology, controlled vocabulary | Ontology of context-based healthcare access-control policies. | owl | is listed by: BioPortal | nlx_157588 | SCR_010429 | 2026-02-14 02:01:59 | 0 | |||||||||
|
Ontology for Newborn Screening Follow-up and Translational Research Resource Report Resource Website |
Ontology for Newborn Screening Follow-up and Translational Research (RRID:SCR_010389) | ONSTR | data or information resource, ontology, controlled vocabulary | Application ontology covering the domain of newborn screening, follow-up and translational research pertaining to patients diagnosed with inheritable and congenital diseases mainly identified through newborn dried blood spot screening. ONSTR is a central component of the project Newborn Screening Follow-up Data Integration Collaborative (NBSDC), https://nbsdc.org. ONSTR uses the Basic Formal Ontology v2 (BFO2, v2012-07-20) as top-level ontology and extends the classes imported from OBO Foundry ontologies and candidate ontologies. | owl, newborn | is listed by: BioPortal | Inheritable disease, Congenital disease | nlx_157520 | SCR_010389 | 2026-02-14 02:01:57 | 0 | ||||||||
|
Santa Barbara Coastal Observation Ontology Resource Report Resource Website |
Santa Barbara Coastal Observation Ontology (RRID:SCR_010424) | OBOE-SBC | data or information resource, ontology, controlled vocabulary | Extensible Observation Ontology for the Santa Barbara Coastal Long Term Ecological Research project (SBC-LTER). It extends core concepts defined in the OBOE suite that are particular to the Santa Barbara Coastal Long Term Ecological Research project''s data collection activities. These include specific measurement protocols, sites, etc. This is meant as a case study ontology for the Semtools project. | owl | is listed by: BioPortal | nlx_157582 | SCR_010424 | 2026-02-14 02:01:46 | 0 | |||||||||
|
Semantic Types Ontology Resource Report Resource Website |
Semantic Types Ontology (RRID:SCR_010425) | STY | data or information resource, ontology, controlled vocabulary | Ontology of semantic types. | umls | is listed by: BioPortal | nlx_157584 | SCR_010425 | 2026-02-14 02:01:58 | 0 |
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