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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
GenomeJack Resource Report Resource Website 10+ mentions |
GenomeJack (RRID:SCR_012026) | GenomeJack | software resource | A genome browser specialized in next-generation sequencing data. | next-generation sequencing, genome, browser, analysis | is listed by: OMICtools | Free, Public | OMICS_02143 | SCR_012026 | 2026-02-14 02:02:17 | 32 | ||||||||
|
Standalone hamming Resource Report Resource Website |
Standalone hamming (RRID:SCR_012025) | Standalone hamming | software resource | Software for decoding error-correcting barcodes. | python, numpy, pyrosequencing, primer, ribosomal rna, dna barcoding, hamming code |
is listed by: OMICtools has parent organization: University of Colorado Boulder; Colorado; USA |
PMID:18264105 | OMICS_02117 | SCR_012025 | 2026-02-14 02:02:32 | 0 | ||||||||
|
diCal-IBD Resource Report Resource Website |
diCal-IBD (RRID:SCR_012111) | software resource | Software tool for detecting identity-by-descent (IBD) tracts between pairs of genomic sequences. | standalone software, unix/linux, mac os x, windows, python |
is listed by: OMICtools has parent organization: SourceForge |
PMID:25147361 | BSD License | OMICS_05459 | SCR_012111 | 2026-02-14 02:02:35 | 0 | ||||||||
|
Golden Helix Incorporated Resource Report Resource Website 100+ mentions |
Golden Helix Incorporated (RRID:SCR_012191) | Golden Helix | commercial organization | Specializes in sequence and array-based SNP and copy number analysis, genetic association software, and analytic services. Their technologies empower scientists to determine the genetic causes of disease, transform drug discovery, develop genetic diagnostics, and advance the quest for personalized medicine. | resource, portal, analysis, software |
is listed by: ScienceExchange is parent organization of: Golden Helix GenomeBrowse is parent organization of: SNP and Variation Suite SNP Analysis is parent organization of: SNP and Variation Suite CNV Analysis is parent organization of: SNP and Variation Suite |
Available to external user | SciEx_10349 | http://www.goldenhelix.com/Services, http://www.scienceexchange.com/facilities/golden-helix-inc | SCR_012191 | Golden Helix Inc., GoldenHelix.com | 2026-02-14 02:02:11 | 138 | ||||||
|
Ionwinze Resource Report Resource Website |
Ionwinze (RRID:SCR_012115) | software resource | Software tool to pick out ion signals that discriminate two groups of samples (e.g. diseased/healthy, resistant/susceptible) by quasi-datapoint-wise comparison using univariate statistic procedures. | standalone software, windows, c++ |
is listed by: OMICtools has parent organization: SourceForge |
PMID:24004415 | GNU General Public License | OMICS_05522 | SCR_012115 | 2026-02-14 02:02:35 | 0 | ||||||||
|
GenoSIGHT Resource Report Resource Website |
GenoSIGHT (RRID:SCR_012119) | software resource | An adaptive imaging cytometry software environment. | standalone software |
is listed by: OMICtools has parent organization: SourceForge |
PMID:25210731 | OMICS_05634 | SCR_012119 | 2026-02-14 02:02:10 | 0 | |||||||||
|
MSImageViewer Resource Report Resource Website |
MSImageViewer (RRID:SCR_012121) | software resource | Software for the conversion of data acquired with the FlashQuant (MALDI version of ABSciex 4000) into MS images. | standalone software | is listed by: OMICtools | Free, Public | OMICS_05672 | SCR_012121 | 2026-02-14 02:02:18 | 0 | |||||||||
|
Cell motility Resource Report Resource Website |
Cell motility (RRID:SCR_012120) | software resource | An open source Java application that provides a clear and concise analysis workbench for large amounts of cell motion data. | applet, java, bio.tools |
is listed by: OMICtools is listed by: Debian is listed by: bio.tools has parent organization: Google Code |
PMID:16762054 | Apache License, v2 | biotools:cell-motility, OMICS_05660 | https://bio.tools/cell-motility | SCR_012120 | Cell_motility | 2026-02-14 02:02:35 | 0 | ||||||
|
GlycanBuilder Resource Report Resource Website 1+ mentions |
GlycanBuilder (RRID:SCR_012123) | software resource | An intuitive and flexible software tool for building and displaying glycan structures. | standalone software |
is listed by: OMICtools has parent organization: Google Code |
PMID:23109548 | GNU Lesser General Public License | OMICS_05681 | SCR_012123 | 2026-02-14 02:02:10 | 6 | ||||||||
|
GlycReSoft Resource Report Resource Website 10+ mentions |
GlycReSoft (RRID:SCR_012122) | software resource | A software package for automated recognition of glycans from LC/MS data. | software package |
is listed by: OMICtools has parent organization: Google Code |
PMID:23049804 | GNU General Public License | OMICS_05674 | SCR_012122 | 2026-02-14 02:02:36 | 27 | ||||||||
|
ISDTool Resource Report Resource Website |
ISDTool (RRID:SCR_012125) | software resource | Software that implements a computational model for predicting immunosuppressive domains (ISDs). The software could be used to identify typical ISDs in retroviruses including HERV, HTLV, HIV, STLV, SIV and MLV. | standalone software, bio.tools |
is listed by: OMICtools is listed by: Debian is listed by: bio.tools has parent organization: SourceForge |
PMID:25008418 | OMICS_05696, biotools:isdtool | https://bio.tools/isdtool | SCR_012125 | 2026-02-14 02:02:18 | 0 | ||||||||
|
Ministry of Health and Family Welfare - Government of India Resource Report Resource Website 1+ mentions |
Ministry of Health and Family Welfare - Government of India (RRID:SCR_012124) | government granting agency | is parent organization of: All India Institute of Medical Sciences; New Delhi; India | SCR_012124 | Ministry of Health and Family Welfare, Ministry of Health & Family Welfare (Government of India), Ministry of Health and Family Welfare (Government of India) | 2026-02-14 02:02:36 | 5 | ||||||||||||
|
University of Western Australia; Perth; Australia Resource Report Resource Website 1+ mentions |
University of Western Australia; Perth; Australia (RRID:SCR_012342) | UWA | university | Public research university in the Australian state of Western Australia. The university's main campus is in Perth, the state capital, with a secondary campus in Albany and various other facilities elsewhere. |
is related to: International AMD Genetics Consortium is related to: Aline is parent organization of: AMPDB: Arabidopsis Mitochondrial Protein Database is parent organization of: Retinal Topography Maps Database is parent organization of: SUB-cellular location database for Arabidopsis proteins II is parent organization of: Australian Medical Bioinformatics Resource is parent organization of: SIMHAP is parent organization of: Colour maps for brain imaging is parent organization of: University of Western Australia Genomics WA Core Facility |
Crossref funder ID:501100001801, Wikidata:Q1517021, ISNI:0000 0004 1936 7910, grid.1012.2, nlx_74663 | https://ror.org/047272k79 | SCR_012342 | UWA | 2026-02-14 02:02:38 | 7 | ||||||||
|
A5-miseq Resource Report Resource Website 100+ mentions |
A5-miseq (RRID:SCR_012148) | software resource | Software that produces high quality microbial genome assemblies on a laptop computer without any parameter tuning. A5-miseq does this by automating the process of adapter trimming, quality filtering, error correction, contig and scaffold generation, and detection of misassemblies. Unlike the original A5 pipeline, A5-miseq can use long reads from the Illumina MiSeq, use read pairing information during contig generation, and includes several improvements to read trimming. | standalone software, illumina, unix/linux, mac os x, bio.tools |
is used by: Nephele is listed by: OMICtools is listed by: Debian is listed by: bio.tools has parent organization: SourceForge |
PMID:25338718 | GNU General Public License | OMICS_06339, biotools:a5-miseq | https://bio.tools/a5-miseq | SCR_012148 | 2026-02-14 02:02:37 | 189 | |||||||
|
IITC Life Sciences Plantar Test Apparatus Resource Report Resource Website 1+ mentions |
IITC Life Sciences Plantar Test Apparatus (RRID:SCR_012152) | Plantar Test Apparatus | instrument resource | The IITC Plantar Analgesia Meter for thermal paw can be used on 12 mice, 6 rats and other animals (cats, rabbits) unrestrained when testing for narcotic drugs. Experiments are easy to perform, simply slide the test head under test subject, align the heat source via our exclusive guide light (idle state) by the attached, adjustable, angled mirror on test head to test subject and perform tests. | testing apparatus, hargreaves, paw radiant heat assay, toe toaster, hargreaves method, hardware, instrument, equipment | rid_000075 | https://www.iitcinc.com/pdf/Plantar%20Test%20Hargreaves.pdf | SCR_012152 | Plantar Test Apparatus for Mice and Rats, Plantar Test Apparatus (Hargreaves Method) for Mice and Rats | 2026-02-14 02:02:37 | 2 | ||||||||
|
EA15: EasyView Dual Input Temperature Datalogger Resource Report Resource Website |
EA15: EasyView Dual Input Temperature Datalogger (RRID:SCR_012151) | EA15 | instrument resource | Temperature datalogger compatible with 7 types of thermocouples. This dual input thermometer accepts Types J, K, E, T, R, S, and N thermocouples. RS-232 port to transfer data to PC for analysis (PC software and cable included) | data logger, thermocouple, hardware, instrument, equipment | Commercial | rid_000074 | https://www.extech-online.com/index.php?main_page=product_info&cPath=78_21_33&products_id=209 | http://www.extech.com/instruments/product.asp?catid=64&prodid=408 | SCR_012151 | EasyView Dual Input Temperature Datalogger, EA15 thermal data logger | 2026-02-14 02:02:11 | 0 | ||||||
|
Superfund basic research program Resource Report Resource Website 1+ mentions |
Superfund basic research program (RRID:SCR_012313) | SBRP, SF | government granting agency | http://www.niehs.nih.gov/research/supported/srp/funding/index.cfm | has parent organization: National Institutes of Health | nlx_inv_1005143 | SCR_012313 | 2026-02-14 02:02:19 | 1 | ||||||||||
|
PrimBio Research Institute LLC Resource Report Resource Website |
PrimBio Research Institute LLC (RRID:SCR_012318) | service resource | PrimBio Research Institute uses the Ion Torrent gene sequencing platform to provide genomic sequencing services. We are also researching and developing targeted gene panels for diseases diagnosis, prevention and treatment. Provides customized analysis. | is listed by: ScienceExchange | SciEx_11901 | http://www.scienceexchange.com/facilities/primbio-research-institute-llc | SCR_012318 | PrimBio Research, PrimBio Research Institute | 2026-02-14 02:02:38 | 0 | |||||||||
|
EC2KEGG Resource Report Resource Website 1+ mentions |
EC2KEGG (RRID:SCR_012127) | software resource | A perl-based package to perform comparative analysis of metabolic pathways between two organisms. | standalone software, perl |
is listed by: OMICtools has parent organization: SourceForge |
PMID:25202338 | OMICS_05782 | SCR_012127 | 2026-02-14 02:02:10 | 8 | |||||||||
|
cnvCapSeq Resource Report Resource Website 1+ mentions |
cnvCapSeq (RRID:SCR_012126) | software resource | Software for accurate and sensitive CNV discovery and genotyping in long-range targeted resequencing. | standalone software, java |
is listed by: OMICtools has parent organization: SourceForge |
PMID:25228465 | GNU Lesser General Public License | OMICS_05722 | SCR_012126 | 2026-02-14 02:02:36 | 2 |
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