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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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ACRoBaT Resource Report Resource Website |
ACRoBaT (RRID:SCR_021546) | data or information resource, project portal, portal, instrument resource | Project related to studying motor behavior. University of Washington in Seattle scientists have developed and published their device for training rats to perform modified center out task. | Instrument, automated device, training rats, perform modified center out task, OpenBehavior |
is listed by: OpenBehavior has parent organization: University of Washington; Seattle; USA |
DOI:10.1016/j.bbr.2017.11.031 | Free, Freely available | SCR_021546 | Automated Center out Rodent Behavioral Trainer | 2026-02-17 10:04:02 | 0 | ||||||||
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EthoScopes project Resource Report Resource Website |
EthoScopes project (RRID:SCR_021426) | data or information resource, project portal, portal, instrument resource | Project related to analysis of behavior in Drosophila.Provides system capable of real time video tracking. System includes raspberry pi and R package for data analysis. Enables high throughput analysis of behavior in Drosophila and other animals. | Data analysis, ethoscope platform, behavior analysis, Drosophila analysis, animals behavior analysis, OpenBehavior, Instrument |
is listed by: OpenBehavior is related to: EthoScopes |
DOI:10.1371/journal.pbio.2003026 | Free, Freely available | SCR_021426 | EthoScopes | 2026-02-17 10:03:48 | 0 | ||||||||
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Picamera project Resource Report Resource Website |
Picamera project (RRID:SCR_021423) | data or information resource, project portal, portal, instrument resource | Project related to tracking animals in large spaces. Picamera system allows for tracking of animals in large behavioral arenas.Open source scalable multi camera tracking system that can be used to track behavior in combination with wireless recording systems.Design is comprised of 8 overhead Raspberry Pi cameras, capable of recording at high frame rate in large field of view, recording video independently in individual Raspberry Pi microcomputers and processed using Picamera Python library. | Tracking rats in large spaces, camera system, Picamera Python library, OpenBehavior, Instrument | is listed by: OpenBehavior | DOI:10.1152/jn.00215.2018 | Free, Freely available | SCR_021423 | Picamera | 2026-02-17 10:03:23 | 0 | ||||||||
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Visual stimulator with customizable light spectra Resource Report Resource Website |
Visual stimulator with customizable light spectra (RRID:SCR_021545) | data or information resource, project portal, portal, instrument resource | Project related to visual neuroscience.Provides spatial visual stimulator with arbitrary spectrum of light for visual neuroscientists.Open source, low cost visual stimulator which can be customized with up to 6 chromatic channels. Spectrum of light can be arbitrary and customizable to be adapted to different animal models based on their visual spectrum. Device details, including parts list and information for custom python library for generating visual stimuli (QDSpy), can be found in eLife publication. | Instrument, Visual stimulator, spatial visual stimulator, spectrum of light, visual neuroscience, OpenBehavior | is listed by: OpenBehavior | DOI:10.7554/elife.48779 | Commercially available | SCR_021545 | 2026-02-17 10:03:25 | 0 | |||||||||
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Live Mouse Tracker project Resource Report Resource Website |
Live Mouse Tracker project (RRID:SCR_021421) | LMT | data or information resource, project portal, portal, instrument resource | Project related to monitoring social interactions of mice. Provides real time behavioral analysis system for groups of mice.System includes random forest machine learning process, RFID sensors and infrared depth RGB-D camera.System includes software tool for Live Mouse Tracker analysis. | Behavioral analysis system, groups of mice, assess complex social behavioral, differences between mice, , lmt-analysis, OpenBehavior, Instrument |
is listed by: OpenBehavior is related to: Live Mouse Tracker analysis is related to: Live Mouse Tracker Toolkit Analysis |
DOI:s41551-019-0396-1 | Free, Freely available | SCR_021421 | Live Mouse Tracker | 2026-02-17 10:03:48 | 0 | |||||||
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OpenVape project Resource Report Resource Website 1+ mentions |
OpenVape project (RRID:SCR_021485) | data or information resource, project portal, portal, instrument resource | Project related to conducting research on effects of nicotine vapor. Provides open source chamber system for rodents to experience regulated nicotine vapor exposure from JUUL electronic cigarette.Vapor exposure apparatus comprised of Arduino Uno microcontroller that relays coded instructions to H-bridge motor controller.H-bridge then sends specific signals to motors that regulate produced vapor sent to exposure chambers. | Regulated nicotine vapor exposure, JUUL electronic cigarette, vapor exposure apparatus, Arduino Uno microcontroller, H-bridge motor controller, exposure chamber, rodent nicotine exposure, OpenBehavior, Instrument |
is listed by: OpenBehavior has parent organization: University of Guelph; Ontario; Canada |
DOI:10.1523/eneuro.0279-20.2020 | Free, Available for download, Freely available | https://www.khokharlab.com/open-source-file-downloads | SCR_021485 | OpenVape | 2026-02-17 10:04:05 | 1 | |||||||
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An open source motorized swivel for in vivo neural and behavioral recordings project Resource Report Resource Website |
An open source motorized swivel for in vivo neural and behavioral recordings project (RRID:SCR_021482) | data or information resource, project portal, portal, instrument resource | Project related to neural recordings such as electrophysiology, calcium imaging, and optogenetics. Provides 3D-printed, motorized commutator for neural recordings of small animals in vivo.Open source motorized swivel for in vivo neural and behavioral recordings.Device operates independently of data acquisition system, and it can be controlled through any popular platform such as Arduino or Raspberry Pi. | Motorized commutator, neural recordings, small animals in vivo recording, motorized swivel, behavioral recordings, OpenBehavior, Instrument | is listed by: OpenBehavior | DOI:10.1016/j.mex.2020.101167 | Free, Freely available | SCR_021482 | An open source motorized swivel for in vivo neural and behavioral recordings | 2026-02-17 10:03:24 | 0 | ||||||||
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Pyper Resource Report Resource Website 1+ mentions |
Pyper (RRID:SCR_021511) | image processing software, software application, data processing software, software resource | Software tool for motion tracking.Provides real time or pre recorded motion tracking of specimen in open field. Used to track path of object of interest in live feed from camera or recorded video. Used to track rodents in open field maze as well as retina of mice.New version v2 of Pyper allows to customise image processing to track different kind of objects. | Motion tracking, open field, track path of object, live feed from camera, live feed recorded video, track rodents, open field maze, OpenBehavior |
is listed by: OpenBehavior is related to: Pyper project |
Free, Available for download, Freely Available | https://edspace.american.edu/openbehavior/project/pyper/ | SCR_021511 | Pyper v2 | 2026-02-17 10:03:24 | 2 | ||||||||
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LinCoM Resource Report Resource Website |
LinCoM (RRID:SCR_021519) | software application, data processing software, data analysis software, software resource, software toolkit | Software MATLAB package for linearization of place fields in complex mazes.Graph theoretic approach for production of linear place fields in complex mazes. Used for producing linear place fields for hippocampal cells during behavior in complex mazes.Specifically designed to deal with mazes with one or more decision points (e.g., T-maze, W-maze, double T-maze, radial maze, plus maze, etc). | Place fields linearization, complex mazes, producing linear place fields, hippocampal cells, complex mazes behavior, OpenBehavior |
is listed by: OpenBehavior is related to: LinCoM project |
DOI:10.1101/2020.08.17.253849 | Free, Available for download, Freely Available | https://edspace.american.edu/openbehavior/project/lincom/ | SCR_021519 | Linear place fields in Complex Mazes | 2026-02-17 10:03:50 | 0 | |||||||
|
ezTrack Resource Report Resource Website 10+ mentions |
ezTrack (RRID:SCR_021496) | software application, data processing software, data analysis software, software resource, software toolkit | Open source video analysis pipeline for investigation of animal behavior. Platform independent set of behavior analysis pipelines using interactive Python ( (iPython/Jupyter Notebook) that researchers with no prior programming experience can use. | Track animal location, track motion, track animal freezing, OpenBehavior |
is listed by: OpenBehavior is related to: ezTrack project |
DOI:10.1038/s41598-019-56408-9 | Free, Available for download, Freely Available | https://edspace.american.edu/openbehavior/project/eztrack/ | SCR_021496 | 2026-02-17 10:04:01 | 10 | ||||||||
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Precision Syringe Pump Controller project Resource Report Resource Website |
Precision Syringe Pump Controller project (RRID:SCR_021493) | data or information resource, project portal, portal, instrument resource | Project related to dispensing precise volumes of fluid over precise timescales.System components include syringe holder and control board with syringe pump controller and programming library.Syringe pump controller was developed by American University scientists. | Syringe pump controller, dispensing precise fluid volumes, fluid over precise timescales, syringe holder, control board with syringe pump controller and programming library, OpenBehavior, Instrument |
is listed by: OpenBehavior has parent organization: American University; Washington D.C.; USA |
DOI:10.1523/eneuro.0240-19.2019 | Free, Freely available | SCR_021493 | Precision Syringe Pump Controller | 2026-02-17 10:03:49 | 0 | ||||||||
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Pi Virtual Reality System project Resource Report Resource Website |
Pi Virtual Reality System project (RRID:SCR_021490) | PiVR | data or information resource, project portal, portal, instrument resource | Project related to study of orientation behavior and neural circuit functions, through creation and analysis of small, freely moving animals in virtual realities. Provides virtual reality tool system for behavioral and neural circuit studies of small animals.Closed loop platform to study unrestrained sensorimotor behavior. | Virtual reality, behavioral and neural circuit, small animal, closed loop platform, unrestrained sensorimotor behavior, OpenBehavior, Instrument | is listed by: OpenBehavior | DOI:10.1371/journal.pbio.3000712 | Free, Freely available | SCR_021490 | Pi Virtual Reality System | 2026-02-17 10:03:24 | 0 | |||||||
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Pypreclin Resource Report Resource Website 1+ mentions |
Pypreclin (RRID:SCR_021526) | image processing software, software application, data processing software, software resource | Software Python tool to processes raw macaque fMRI images using algorithms embedded in automatic pipeline. | Raw macaque fMRI images, fMRI images, macaque images, Python, OpenBehavior |
is listed by: OpenBehavior is related to: Pypreclin project |
DOI:10.1016/j.neuroimage.2019.116353 | Free, Available for download, Freely Available | https://edspace.american.edu/openbehavior/project/pypreclin/ | SCR_021526 | 2026-02-17 10:04:02 | 5 | ||||||||
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Open-tES project Resource Report Resource Website |
Open-tES project (RRID:SCR_021487) | data or information resource, project portal, portal, instrument resource | Project is related to transcranial Electrical Stimulation.Included system contains aluminum box stimulator with banana connectors for both anode and cathode on front panel,power supply on rear, power switch and serial port, LCD screen and three buttons on top panel that are used to input settings for stimulator. Device for delivering non-invasive neuromodulation techniques such as transcranial direct current stimulation. If device is used for certain types of tDCS (otDCS and tPCs) or external triggering, computer control must be used. Microcontroller is used to regulate operating speed and pulse width modulation switching frequency administrated by device. | Stimulation system, non-invasive neuromodulation techniques delivery, transcranial direct current stimulation, stimulator, OpenBehavior, Instrument | is listed by: OpenBehavior | DOI:10.1371/journal.pone.0236061 | Free, Freely available | SCR_021487 | Open-tES | 2026-02-17 10:04:01 | 0 | ||||||||
|
Pathfinder Resource Report Resource Website 100+ mentions |
Pathfinder (RRID:SCR_021520) | data analysis software, software application, data processing software, software resource | Open source software for analyzing spatial navigation search strategies. | Analyzing spatial navigation search strategies, spatial navigation, search strategies, OpenBehavior |
is listed by: OpenBehavior is related to: Pathfinder project |
DOI:10.1101/715961 | Free, Available for download, Freely Available | https://edspace.american.edu/openbehavior/project/pathfinder/ | SCR_021520 | 2026-02-17 10:04:06 | 225 | ||||||||
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OpenMonkeyStudio project Resource Report Resource Website |
OpenMonkeyStudio project (RRID:SCR_021409) | data or information resource, project portal, portal, instrument resource | Project for tracking interactions among freely moving monkeys.System includes integrated hardware and software for pose tracking in freely moving rhesus macaques. | Pose tracking, non human primates, motion capture system, 3D pose, freely moving macaques, interactions among freely moving monkeys, OpenBehavior, Instrument | is listed by: OpenBehavior | DOI:10.1038/s41467-020-18441-5 | Free, Freely available | SCR_021409 | OpenMonkeyStudio | 2026-02-17 10:03:22 | 0 | ||||||||
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Rodent Arena Tracker project Resource Report Resource Website |
Rodent Arena Tracker project (RRID:SCR_021408) | RAT | data or information resource, project portal, portal, instrument resource | Project related to rodent tracking and task control.Provides closed loop system for machine vision rodent tracking and task control created by scientist from Washington University. System to track and report mouse activity while they are contained in simple arena. System uses OpenMV M7 microcontroller to acquire images of arena and process them in real-time to report mouse centroid data to text file. Wireless position tracker for automatically tracking mice in high contrast arenas. | Wireless position tracker, automatically tracking mice, positional behavior data, OpenMV M7 microcontroller, acquire arena images, mouse movement, OpenMV Cam M7 hardware, OpenBehavior, instrument, equipment, USEDit, Instrument |
is listed by: OpenBehavior has parent organization: Washington University in St. Louis; Missouri; USA |
DOI:10.1523/eneuro.0485-19.2020 | Free, Freely available | SCR_021408 | Rodent Arena Tracker | 2026-02-17 10:04:04 | 0 | |||||||
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Wave Surfer Resource Report Resource Website 10+ mentions |
Wave Surfer (RRID:SCR_021529) | software application, data processing software, data analysis software, data acquisition software, software resource | Open source software application for neurophysiology data acquisition and analysis. Program is based in MatLab, and evolved from earlier open source software package called Ephus. | neurophysiology data acquisition, neurophysiology data analysis, neurophysiology data, MATLAB, OpenBehavior |
is listed by: OpenBehavior is related to: Wave Surfer project |
Free, Available for download, Freely Available | https://edspace.american.edu/openbehavior/project/wave-surfer/ | SCR_021529 | 2026-02-17 10:03:25 | 46 | |||||||||
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Dual port Lick Detector project Resource Report Resource Website |
Dual port Lick Detector project (RRID:SCR_021454) | data or information resource, project portal, portal, instrument resource | Project related to measuring licking behavior in mice.System includes device used for both real time measurement and manipulation of licking behavior in head fixed mice. System provides distribution package for Dual Port Lick Detector.Package includes files relevant to building lick detector. | Building lick detector files, lick detector, OpenBehavior, Instrument |
is listed by: OpenBehavior is related to: Dual Port Lick Detector |
DOI:10.1152/jn.00500.2018 | Free, Freely available | SCR_021454 | Dual port Lick Detector | 2026-02-17 10:04:05 | 0 | ||||||||
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Cerebro Wireless Optogenetic System project Resource Report Resource Website |
Cerebro Wireless Optogenetic System project (RRID:SCR_021474) | data or information resource, project portal, portal, instrument resource | Project related to wireless controlled optogenetic stimulation. Provides system for wireless optogenetic stimulation developed in Karpova Lab with ability to be customized.Features Cerebro,rechargeable, battery powered wireless receiver;head implant containing optical fibers and two independent laser diodes; base station for transmitting radio signals to Cerebro, controlled by Windows computer via USB or by TTL; charging dock; and Xavier, user friendly GUI for sending and logging base station commands. | Wireless optogenetic stimulation, Janelia open source hardware, Janelia open source software, Cerebro battery powered wireless receiver, head implant, Xavier, OpenBehavior, Instrument | is listed by: OpenBehavior | Free, Freely available | SCR_021474 | Cerebro Wireless Optogenetic System | 2026-02-17 10:04:01 | 0 |
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