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URL: http://code.google.com/p/gasv/
Proper Citation: GASV (RRID:SCR_000061)
Description: Software tool for identifying structural variants (SVs) from paired-end sequencing data.GASV distribution includes three components that are typically run in succession: the BAM file of unique paired-read mappings is processed; structural variants are identified by clustering discordant fragments; and a probabilistic algorithm improves the specificity of GASV predictions.
Abbreviations: GASV
Synonyms: Geometric Analysis of Structural Variants
Resource Type: software resource, software application, data analysis software, data processing software
Defining Citation: PMID:19477992
Keywords: paired-end sequencing data, structural variant, probabilistic algorithm, discordant fragment, bio.tools
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