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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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University of California at San Diego Institute for Genomic Medicine Genomics Center Core Facilitiy Resource Report Resource Website 1+ mentions |
University of California at San Diego Institute for Genomic Medicine Genomics Center Core Facilitiy (RRID:SCR_022740) | service resource, core facility, access service resource | Provides services including sequencing library preparation and sequencing on Illumina MiSeq and NovaSeq 6000 platforms. Supports single cell sequencing on 10X Genomics Chromium Controller. Provides Illumina Infinium Beadchips, which includes variety of whole genome genotyping arrays as well as Infinium MethylationEPIC BeadChip. | USEDit, ABRF, sequencing library preparation, sequencing, single cell sequencing, whole genome genotyping arrays |
is listed by: ABRF CoreMarketplace is related to: USEDit has parent organization: University of California at San Diego; California; USA |
NIH Office of the Director S10 OD026929; NIDDK P30DK063491; NCI P30CA023100; NIDDK P30DK120515 |
ABRF_1025 | https://coremarketplace.org/?FacilityID=1025&citation=1 | SCR_022740 | UCSD IGM Genomics Center | 2026-02-16 09:50:20 | 1 | |||||||
|
University of Pittsburgh Center for Research Computing Core Facility Resource Report Resource Website 100+ mentions |
University of Pittsburgh Center for Research Computing Core Facility (RRID:SCR_022735) | service resource, core facility, access service resource | Supports leading edge research with free access to advanced computing hardware and software. | USEDit, ABRF, advanced computing hardware and software services |
is listed by: ABRF CoreMarketplace is related to: USEDit has parent organization: University of Pittsburgh; Pennsylvania; USA |
NIH Office of the Director S10OD028483 | ABRF_1544 | https://coremarketplace.org/?FacilityID=1544&citation=1 | SCR_022735 | Center for Research Computing | 2026-02-16 09:50:30 | 241 | |||||||
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Center for Neuroanatomy with Neurotropic Viruses Resource Report Resource Website 100+ mentions |
Center for Neuroanatomy with Neurotropic Viruses (RRID:SCR_024984) | CNNV | data or information resource, project portal, organization portal, portal | This national resource was created to provide neuroscience community with access to reagents, training and facilities that are necessary to use neurotropic viruses as transneuronal tracers. | NIH, ORIP, Office of Research Infrastructure Programs, neurotropic viruses, transneuronal tracers, | NIH Office of the Director 2P40OD010996-16 | https://www.cnnv.pitt.edu/ | SCR_024984 | 2026-02-16 09:50:57 | 115 | |||||||||
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SEQUIN:Synaptic Evaluation and QUantification by Imaging Nanostructure Resource Report Resource Website 1+ mentions |
SEQUIN:Synaptic Evaluation and QUantification by Imaging Nanostructure (RRID:SCR_026029) | SEQUIN | software application, data processing software, data analysis software, source code, software resource | Analysis software for identification of synaptic loci from 3D image datasets. | 3D image datasets, 3D image, synaptic loci, synaptic loci identification, | NIH Office of the Director OD021629 | PMID:33490984 | Free, Available for download, Freely available | SCR_026029 | Synaptic Evaluation and QUantification by Imaging Nanostructure | 2026-02-16 09:51:04 | 1 | |||||||
|
RagTag Resource Report Resource Website 50+ mentions |
RagTag (RRID:SCR_027293) | software toolkit, source code, software resource | Collection of software tools for scaffolding and improving modern genome assemblies. Reference-based scaffolder. Used for fast and flexible genome assembly scaffolding and improvement. | Reference-based scaffolder, genome assembly scaffolding, scaffolding, genome assemblies, | NIH Office of the Director S10OD028632; NSF ; Howard Hughes Medical Institutes ; European Research Council ; Swiss National Science Foundation |
PMID:36522651 | SCR_027293 | 2026-02-16 09:51:21 | 66 | ||||||||||
|
ReproSchema Resource Report Resource Website |
ReproSchema (RRID:SCR_027848) | software application, software resource, source code | Software standardized framework for creating, sharing, and reusing cognitive and clinical assessments. Standardized form generation and data collection schema to harmonize results by design across projects. Used for enhancing research reproducibility through standardized survey data collection. | ReproNim, FAIR, standardized framework, creating, sharing, reusing, cognitive, clinical, assessment, standardized form generation, data collection schema, | NIBIB P41EB019936; NIH Office of the Director OT2OD032720 |
PMID:40644691 | Free, Available for download, Freely available | SCR_027848 | 2026-02-16 09:51:29 | 0 | |||||||||
|
Octopus bimaculoides Histotomography Blueprint Resource Report Resource Website |
Octopus bimaculoides Histotomography Blueprint (RRID:SCR_027759) | CephTeam_Octo9 | 3d spatial image, topical portal, image, portal, data or information resource | Resource serves as a 'Digital Specimen' for Digital Organismal Biology, providing interactive Neuroglancer-based visualization and 3D segmentation masks for major organ systems, including the digestive, respiratory, vascular, and nervous systems. It specifically annotates novel neural tracts including the Intermediate Longitudinal Tracts (iLT) and Arm-to-Arm U-Tracts (AAUT) as well as ~300 additional tissue and organ level segmentations. Provides high-resolution (0.7 µm isotropic), whole-organism microCT reconstruction of an intact hatchling Octopus bimaculoides. | Octopus bimaculoides, microCT, histotomography, neuroanatomy, digital organismal biology, connectomics, whole-organism | ONR N00014-22-1-2208; NIH Office of the Director R24OD018559; NIH Officie of the Director R24OD035407 |
Free, Freely available | SCR_027759 | 2026-02-16 09:51:29 | 0 |
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