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http://purl.bioontology.org/ontology/ROLEO

Ontology in the domain of role classification that aims to standardize role classification and support computer-assisted reasoning. RoleO is a community-based ontology, and its development follows the OBO Foundry principles.

Proper citation: Role Ontology (RRID:SCR_010420) Copy   

•   Source: SciCrunch Registry

http://purl.bioontology.org/ontology/IDO

Ontologies designed as a set of interoperable ontologies that will together provide coverage of the infectious disease domain. At the core of the set is a general Infectious Disease Ontology (IDO-Core) of entities relevant to both biomedical and clinical aspects of most infectious diseases. Sub-domain specific extensions of IDO-Core complete the set providing ontology coverage of entities relevant to specific pathogens or diseases. Please note: The ontology metrics displayed by BioPortal do not distinguish IDO-developed terms from terms imported from other ontologies.

Proper citation: Infectious Disease Ontology (RRID:SCR_010345) Copy   

•   Source: SciCrunch Registry

http://purl.bioontology.org/ontology/ICECI

A system of classifications to enable systematic description of how injuries occur. It is designed especially to assist injury prevention. It was originally designed for use in settings in which information is recorded in a way that allows statistical reporting--for example, injury surveillance based on collection of information about cases attending a sample of hospital emergency departments. It has also been found useful for other purposes. For example, it has been used as a reference classification during revision of another classification, to record risk-factor exposure of children in a cohort study, as the basis for special-purpose classifications and in a growing number of other ways.

Proper citation: International Classification of External Causes of Injuries (RRID:SCR_010348) Copy   

•   Source: SciCrunch Registry

http://purl.bioontology.org/ontology/ICD10CM

Ontology of the International Classification of Diseases, 10th Edition, Clinical Modification, 2011_01

Proper citation: International Classification of Diseases Version 10 - Clinical Modification (RRID:SCR_010350) Copy   

•   Source: SciCrunch Registry

http://purl.bioontology.org/ontology/ZEA

THIS RESOURCE IS NO LONGER IN SERVICE, documented on April 23, 2014. Description not available.

Proper citation: Maize Gross Anatomy Ontology (RRID:SCR_010353) Copy   

•   Source: SciCrunch Registry

http://purl.bioontology.org/ontology/MHC

Ontology that contains terms necessary for describing and categorizing concepts related to Major Histocompatibility Complex, in general, for a number of model species, and also for humans.

Proper citation: Major Histocompatibility Complex Ontology (RRID:SCR_010354) Copy   

•   Source: SciCrunch Registry

http://purl.bioontology.org/ontology/MCCV

Structured controlled vocabulary for describing meta information of microbial calture collection maintained in biological research centers

Proper citation: Microbial Culture Collection Vocabulary (RRID:SCR_010361) Copy   

•   Source: SciCrunch Registry

http://purl.bioontology.org/ontology/MIXS

Ontology providing an RDF representation of the MIxS (Minimal Information about any Sequence) family of checklists.

Proper citation: Minimal Information about any Sequence Ontology (RRID:SCR_010364) Copy   

•   Source: SciCrunch Registry

http://purl.bioontology.org/ontology/NIFDYS

Ontology that contains the former BIRNLex-Disease, version 1.3.2. -- The BIRN Project lexicon provided entities for data and database annotation for the BIRN project, covering anatomy, disease, data collection, project management and experimental design. It was built using the organizational framework provided by the foundational Basic Formal Ontology (BFO). It used an abstract biomedical layer on top of that - OBO-UBO which was constructed as a proposal to the OBO Foundry. This was meant to support creating a sharable view of core biomedical objects such as biomaterial_entity, and organismal_entity that all biomedical ontologies are likely to need and want to use with the same intended meaning. The BIRNLex biomaterial entities have already been factored to separately maintained ontology - BIRNLexBiomaterialEntity.owl which this BIRNLex-Main.owl file imports. The Ontology of Biomedical Investigation (OBI) is also imported and forms the foundation for the formal description of all experiment-related artifacts. The BIRNLex will serve as the basis for construction of a formal ontology for the multiscale investigation of neurological disease.

Proper citation: NIF Dysfunction Ontlogy (RRID:SCR_010365) Copy   

•   Source: SciCrunch Registry

http://purl.bioontology.org/ontology/CANONT

Upper-level ontology for cancer.

Proper citation: Upper-Level Cancer Ontology (RRID:SCR_010443) Copy   

•   Source: SciCrunch Registry

http://purl.bioontology.org/ontology/WSIO

Ontology that enables automated interaction with more complex Web services that are typical for example within life sciences. WSIO is however independent of the application domain and relevant for both SOAP and REST Web services, and for batch execution engines in general. If the interaction scenario with a Web service is nontrivial (and incorporates session handling), annotation with WSIO concepts will enable automatic generation of client programs, scripts, or interactive applications with a graphical user interface. WSIO also enables automation of different ways of data transfer and data un-/compression or en-/decoding. They strongly discourage providers from developing complex interaction and data-transfer/compression scenarios, however when needed, WSIO may enable smooth automated interaction with them. Future versions will support more interaction scenarios. WSIO aims to serve also as a means to standardise the complex interaction scenarios primarily within both SOAP and REST Web services, and secondarily to apply also to batch execution infrastructure in general.

Proper citation: Web-Service Interaction Ontology (RRID:SCR_010448) Copy   

•   Source: SciCrunch Registry

http://purl.bioontology.org/ontology/CO-WHEAT

Ontology that defines traits of the International Wheat Information System (IWIS) database and wheat descriptor.

Proper citation: Wheat Trait Ontology (RRID:SCR_010449) Copy   

•   Source: SciCrunch Registry

http://purl.bioontology.org/ontology/XEO

Ontology to help plant scientists in documenting and sharing metadata describing the abiotic environment.

Proper citation: XEML Environment Ontology (RRID:SCR_010450) Copy   

•   Source: SciCrunch Registry

http://uberon.org

An integrated cross-species anatomy ontology representing a variety of entities classified according to traditional anatomical criteria such as structure, function and developmental lineage. The ontology includes comprehensive relationships to taxon-specific anatomical ontologies, allowing integration of functional, phenotype and expression data. Uberon consists of over 10000 classes (March 2014) representing structures that are shared across a variety of metazoans. The majority of these classes are chordate specific, and there is large bias towards model organisms and human.

Proper citation: UBERON (RRID:SCR_010668) Copy   

•   Source: SciCrunch Registry

http://purl.bioontology.org/ontology/TADS

Anatomy Ontology of the Tick, Families: Ixodidae, Argassidae

Proper citation: Tick Gross Anatomy Ontology (RRID:SCR_010433) Copy   

•   Source: SciCrunch Registry

http://purl.bioontology.org/ontology/TM-CONST

Ontology of the value set for the constitution property of the International Classification of Traditional Medicine (ICTM).

Proper citation: Traditional Medicine Constitution Value Set (RRID:SCR_010435) Copy   

•   Source: SciCrunch Registry

http://purl.bioontology.org/ontology/TM-SIGNS-AND-SYMPTS

Ontology of the value set for the Signs and Symptoms property of the International Classification of Traditional Medicine (ICTM).

Proper citation: Traditional Medicine Signs and Symptoms Value Set (RRID:SCR_010438) Copy   

•   Source: SciCrunch Registry

http://purl.bioontology.org/ontology/UNITSONT

A small ontology for the units of measurement developed during the development of the Sleep Domain Ontology (SDO). It supports the use of SDO within the PhysioMIMI application.

Proper citation: Units Ontology (RRID:SCR_010441) Copy   

•   Source: SciCrunch Registry

http://purl.bioontology.org/ontology/UO

Metrical units ontology for use in conjunction with PATO

Proper citation: Units of Measurement Ontology (RRID:SCR_010442) Copy   

•   Source: SciCrunch Registry

http://purl.bioontology.org/ontology/BOF

An ontology of biodiversity of INPA

Proper citation: Biodiversity Ontology (RRID:SCR_010204) Copy   

•   Source: SciCrunch Registry