Tools   Select Another Resource Report Type

http://purl.bioontology.org/ontology/GEXO

An application ontology for the domain of gene expression. The ontology integrates fragments of GO and MI with data from GOA, IntAct, UniProt, NCBI, KEGG and orthology relations.

Proper citation: Gene Expression Ontology (RRID:SCR_010326) Copy   

•   Source: SciCrunch Registry

http://purl.bioontology.org/ontology/GFO

A top-level ontology integrating objects and processes.

Proper citation: General Formal Ontology (RRID:SCR_010328) Copy   

•   Source: SciCrunch Registry

http://purl.bioontology.org/ontology/GFO-BIO

A biological core ontology built on the General Formal Ontology.

Proper citation: General Formal Ontology for Biology (RRID:SCR_010329) Copy   

•   Source: SciCrunch Registry

http://purl.bioontology.org/ontology/COGAT

Ontology that characterizes the state of current thought in cognitive science. It defines a set of mental concepts along with a set of mental tasks, and the measurement relations between those classes.

Proper citation: Cognitive Atlas Ontology (RRID:SCR_010295) Copy   

•   Source: SciCrunch Registry

http://purl.bioontology.org/ontology/CTCAE

A coding system for reporting adverse events that occur in the course of cancer therapy. It was derived from the Common Toxicity Criteria (CTC) v2.0 and is maintained by the Cancer Therapy Evaluation Program (CTEP) at the National Cancer Institution (NCI).

Proper citation: Common Terminology Criteria for Adverse Events (RRID:SCR_010296) Copy   

•   Source: SciCrunch Registry

http://sourceforge.net/apps/mediawiki/cdao/

A formalization of concepts and relations relevant to evolutionary comparative analysis, such as phylogenetic trees, OTUs (operational taxonomic units) and compared characters (including molecular characters as well as other types). CDAO is being developed by scientists in biology, evolution, and computer science

Proper citation: Comparative Data Analysis Ontology (RRID:SCR_010297) Copy   

•   Source: SciCrunch Registry

http://purl.bioontology.org/ontology/GCO

Ontology to define the abstract division of the total genetic information of an organism by its physical separation into different components, thereby providing a high level reference point to which more specific descriptions of the characteristics of these components can be linked.

Proper citation: Genome Component Ontology (RRID:SCR_010330) Copy   

•   Source: SciCrunch Registry

http://purl.bioontology.org/ontology/CARELEX

Categories and terms used to classify content (documents, images, etc) in electronic content repositories for life science / BioPharma. Initial version contains content model for use with clinical trial electronic Trial Master Files or eTMF archives. A Content model contains content classification categories (classes) and metadata properties (data properties). Data properties should be assigned to each Content Type. Recent changes include: addition of electronic signature support, medical imaging classifications.

Proper citation: Content Archive Resource Exchange Lexicon (RRID:SCR_010298) Copy   

•   Source: SciCrunch Registry

http://purl.bioontology.org/ontology/AAO

A structured controlled vocabulary of the anatomy of Amphibians. Note that AAO is currently being integrated into Uberon.

Proper citation: Amphibian Gross Anatomy Ontology (RRID:SCR_010291) Copy   

•   Source: SciCrunch Registry

http://purl.bioontology.org/ontology/HRDO

A core ontology consistent with a metamodel (disorders and groups of disorders, genes, clinical signs and their relations) and an instantiation of this metamodel with Orphanet Data (available on http://orphadata.org). Research experiments demonstrated (i) efficient classifications generation based on SPARQL Construct, (ii) perspectives in semantic audit of a knowledge base, (iii) semantic comparison with OMIM (www.omim.org) using proximity measurements and (iv) opened perspectives in knowledge sharing (LORD, http://lord.bndmr.fr). Current production services of Orphanet developed ORDO, released in 2014, an ontology synchronized with their production database.

Proper citation: Disease core ontology applied to Rare Diseases (RRID:SCR_010308) Copy   

•   Source: SciCrunch Registry

http://purl.bioontology.org/ontology/CPTH

Metathesaurus of current procedural terminalogy (CPT).

Proper citation: Current Procedural Terminalogy Hierarchy (RRID:SCR_010300) Copy   

•   Source: SciCrunch Registry

http://purl.bioontology.org/ontology/IDODEN

An ontology for dengue fever.

Proper citation: Dengue Fever Ontology (RRID:SCR_010304) Copy   

•   Source: SciCrunch Registry

http://purl.bioontology.org/ontology/DERMLEX

A standardized terminology of dermatologic diagnoses, therapies, procedures, and laboratory tests.

Proper citation: Dermatology Lexicon (RRID:SCR_010305) Copy   

•   Source: SciCrunch Registry

http://purl.bioontology.org/ontology/DOCCC

Diagnosis ontology of clinical care classification.

Proper citation: Diagnosis Ontology of Clinical Care Classification (RRID:SCR_010306) Copy   

•   Source: SciCrunch Registry

http://purl.bioontology.org/ontology/BNO

Ontology that relates concepts and terminologies used for human nutrition in a clinical and biomedical setting.

Proper citation: Bionutrition Ontology (RRID:SCR_010272) Copy   

•   Source: SciCrunch Registry

http://purl.bioontology.org/ontology/BT

A top-domain ontology that provides definitions for the foundational entities of biomedicine as a basic vocabulary to unambiguously describe facts in this domain. It can furthermore serve as top-level model for creating new ontologies for more specific domains or as aid for aligning or improving existing ones.

Proper citation: BioTop Ontology (RRID:SCR_010039) Copy   

•   Source: SciCrunch Registry

http://purl.bioontology.org/ontology/ELIG

A set of 1,437 eligibility features that were organized into a feature hierarchy using 80 breast cancer trials.

Proper citation: Eligibility Feature Hierarchy (RRID:SCR_010314) Copy   

•   Source: SciCrunch Registry

http://purl.bioontology.org/ontology/EMO

Ontology to describe the active components of the enzyme''s reactions (cofactors, amino acid residues and cognate ligands) and their roles in the reaction. EMO builds upon this by formalizing key concepts, and the relationships between them, necessary to define enzymes and their functions. This describes not only the general features of an enzyme, including the EC number (catalytic activity), 3D structure and cellular locations, but also allows for the detailed annotation of the mechanism. This mechanistic detail can be either at a gross level (overall reaction only), or the more detailed granularity of the steps and components required to effect the overall chemical transformation.

Proper citation: Enzyme Mechanism Ontology (RRID:SCR_010315) Copy   

•   Source: SciCrunch Registry

http://purl.bioontology.org/ontology/PIERO

An enzyme ontology that deals with partial reactions (transformations)

Proper citation: Enzyme Reaction Ontology for partial chemical perspectives (RRID:SCR_010316) Copy   

•   Source: SciCrunch Registry

http://purl.bioontology.org/ontology/EPILONT

Ontology about the epilepsy domain and epileptic seizures. Based on the diagnosis proposed by the International League Against Epilepsy (ILAE).

Proper citation: Epilepsy Ontology (RRID:SCR_010317) Copy   

•   Source: SciCrunch Registry