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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Semantic Types Ontology Resource Report Resource Website |
Semantic Types Ontology (RRID:SCR_010425) | STY | data or information resource, ontology, controlled vocabulary | Ontology of semantic types. | umls | is listed by: BioPortal | nlx_157584 | SCR_010425 | 2026-02-12 09:45:15 | 0 | |||||||||
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Dermatology Lexicon Resource Report Resource Website |
Dermatology Lexicon (RRID:SCR_010305) | DERMLEX | data or information resource, ontology, controlled vocabulary | A standardized terminology of dermatologic diagnoses, therapies, procedures, and laboratory tests. | owl | is listed by: BioPortal | nlx_157384 | SCR_010305 | 2026-02-12 09:45:12 | 0 | |||||||||
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Diagnosis Ontology of Clinical Care Classification Resource Report Resource Website |
Diagnosis Ontology of Clinical Care Classification (RRID:SCR_010306) | DOCCC | data or information resource, ontology, controlled vocabulary | Diagnosis ontology of clinical care classification. | owl | is listed by: BioPortal | nlx_157385 | SCR_010306 | 2026-02-12 09:45:24 | 0 | |||||||||
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Semanticscience Integrated Ontology Resource Report Resource Website 1+ mentions |
Semanticscience Integrated Ontology (RRID:SCR_010427) | SIO | data or information resource, ontology, controlled vocabulary | Ontology that provides a simple, integrated upper level ontology (types, relations) for consistent knowledge representation across physical, processual and informational entities. It provides vocabulary for the Bio2RDF (http://bio2rdf.org) and SADI (http://sadiframework.org) projects. | owl |
is used by: DisGeNET is listed by: BioPortal |
nlx_157586 | SCR_010427 | 2026-02-12 09:45:19 | 1 | |||||||||
|
Ontology of Core Data Mining Entities Resource Report Resource Website |
Ontology of Core Data Mining Entities (RRID:SCR_010393) | ONTODM-CORE | data or information resource, ontology, controlled vocabulary | Generic ontology for the domain of data mining that includes the information processing processes that occur in the domain of data mining, participants in the processes and their specifications. OntoDM is highly transferable and extendable due to its adherence to accepted standards, and compliance with existing ontology resources. The generality in scope allows wide number of applications of the ontology, such as semantic annotation of data mining scenarios, ontology based support for QSARs, etc. | owl | is listed by: BioPortal | nlx_157526 | SCR_010393 | 2026-02-12 09:45:14 | 0 | |||||||||
|
Pediatric Terminology Resource Report Resource Website |
Pediatric Terminology (RRID:SCR_010395) | PEDTERM | data or information resource, ontology, controlled vocabulary | Terms associated with pediatrics, representing information related to child health and development from pre-birth through 21 years of age; contributed by the National Institute of Child Health and Human Development. | owl | is listed by: BioPortal | Aging | nlx_157545 | SCR_010395 | 2026-02-12 09:45:18 | 0 | ||||||||
|
Ontology of Experimental Variables and Values Resource Report Resource Website |
Ontology of Experimental Variables and Values (RRID:SCR_010396) | OOEVV | data or information resource, ontology, controlled vocabulary | Ontology that provides a lightweight representation of the variables used to measure experimental properties and the measurement scales that form the complex data types supporting that data. Many different variables measure the same thing, here they use a lightweight representation driven by a small number of classes and a large number of variables to focus only on providing a vocabulary of variables that may be extended for consolidation to standardized variables for specific things and functions to map between values from different measurements scales. They use the base ontology description to provide a very lightweight representation of the basic elements of an experimental design and they use views to instantiate it for specific domains. | owl | is listed by: BioPortal | nlx_157528 | SCR_010396 | 2026-02-12 09:45:10 | 0 | |||||||||
|
Ontology of General Purpose Datatypes Resource Report Resource Website |
Ontology of General Purpose Datatypes (RRID:SCR_010397) | ONTODT | data or information resource, ontology, controlled vocabulary | Ontology that contains entities such as: datatype, datatype generator, datatype quality and others giving the possibility to represent arbitrary complex datatypes. This is an important fact for a general data mining ontology that wants to represent and query over modelling algorithms for mining structured data. The ontology was first developed under the OntoDM (Ontology of Data Mining, http://kt.ijs.si/panovp/OntoDM) ontology, but for generality and reuse purpose it was decided to export it as a separate ontology. Additionaly, the OntoDT ontology is based on and ISO/IEC 11404 (http://www.iso.org/iso/catalogue_detail.htm?csnumber=39479) standard and can be reused used independently by any domain ontology that requires representation and reasoning about general purpose datatypes. | owl | is listed by: BioPortal | nlx_157529 | SCR_010397 | 2026-02-12 09:45:15 | 0 | |||||||||
|
Ontology of Alternative Medicine French Resource Report Resource Website |
Ontology of Alternative Medicine French (RRID:SCR_010390) | ONTOMA | data or information resource, ontology, controlled vocabulary | Ontology for common concepts for communication between traditional medicine and western medicine. (In French) | owl | is listed by: BioPortal | nlx_157523 | SCR_010390 | Ontology of Alternative Medicine - French | 2026-02-12 09:45:26 | 0 | ||||||||
|
Ontology of Glucose Metabolism Disorder Resource Report Resource Website |
Ontology of Glucose Metabolism Disorder (RRID:SCR_010399) | OGMD | data or information resource, ontology, controlled vocabulary | Ontology including the disease names, phenotypes and their classifications involved in Glucose Metabolism Disorder, Diabetes. (OBO and OWL format are available in sourceforge.) | obo, owl | is listed by: BioPortal | Glucose Metabolism Disorder | nlx_157531 | SCR_010399 | 2026-02-12 09:45:18 | 0 | ||||||||
|
Eligibility Feature Hierarchy Resource Report Resource Website |
Eligibility Feature Hierarchy (RRID:SCR_010314) | ELIG | data or information resource, ontology, controlled vocabulary | A set of 1,437 eligibility features that were organized into a feature hierarchy using 80 breast cancer trials. | owl | is listed by: BioPortal | Breast cancer | nlx_157395 | SCR_010314 | 2026-02-12 09:45:24 | 0 | ||||||||
|
Enzyme Mechanism Ontology Resource Report Resource Website 1+ mentions |
Enzyme Mechanism Ontology (RRID:SCR_010315) | EMO | data or information resource, ontology, controlled vocabulary | Ontology to describe the active components of the enzyme''s reactions (cofactors, amino acid residues and cognate ligands) and their roles in the reaction. EMO builds upon this by formalizing key concepts, and the relationships between them, necessary to define enzymes and their functions. This describes not only the general features of an enzyme, including the EC number (catalytic activity), 3D structure and cellular locations, but also allows for the detailed annotation of the mechanism. This mechanistic detail can be either at a gross level (overall reaction only), or the more detailed granularity of the steps and components required to effect the overall chemical transformation. | owl | is listed by: BioPortal | nlx_157397 | SCR_010315 | 2026-02-12 09:45:15 | 1 | |||||||||
|
Enzyme Reaction Ontology for partial chemical perspectives Resource Report Resource Website 1+ mentions |
Enzyme Reaction Ontology for partial chemical perspectives (RRID:SCR_010316) | PIERO | data or information resource, ontology, controlled vocabulary | An enzyme ontology that deals with partial reactions (transformations) | owl | is listed by: BioPortal | nlx_157398 | SCR_010316 | 2026-02-12 09:45:09 | 1 | |||||||||
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Epilepsy Ontology Resource Report Resource Website |
Epilepsy Ontology (RRID:SCR_010317) | EPILONT | data or information resource, ontology, controlled vocabulary | Ontology about the epilepsy domain and epileptic seizures. Based on the diagnosis proposed by the International League Against Epilepsy (ILAE). | owl | is listed by: BioPortal | nlx_157399 | SCR_010317 | 2026-02-12 09:45:12 | 0 | |||||||||
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Loggerhead Nesting Ontology Resource Report Resource Website |
Loggerhead Nesting Ontology (RRID:SCR_010318) | LHN | data or information resource, ontology, controlled vocabulary | An ontology for Loggerhead sea turtle (Caretta caretta) nesting behavior, based on the published ethogram of Hailman and Elowson. A demonstration of ontology construction as a general technique for coding ethograms and other descriptions of behavior into machine understandable forms. | obo | is listed by: BioPortal | nlx_157459 | SCR_010318 | 2026-02-12 09:45:24 | 0 | |||||||||
|
Fire Ontology Resource Report Resource Website |
Fire Ontology (RRID:SCR_010320) | FIRE | data or information resource, ontology, controlled vocabulary | Ontology to represent the set of concepts about the fire occurring in natural vegetation, its characteristics, causes and effects, with focus on Cerrado vegetation domain. The fire plays a determinant role on the structure and composition of Cerrado physiognomies. | owl | is listed by: BioPortal | nlx_157404 | SCR_010320 | 2026-02-12 09:45:09 | 0 | |||||||||
|
Flora Phenotype Ontology Resource Report Resource Website |
Flora Phenotype Ontology (RRID:SCR_010321) | FLOPO | data or information resource, ontology, controlled vocabulary | Ontology generated from the Flora Malesiana, Flora Gabon, Flora of Central Africa, and a collection of Kew''s African Floras. Every class in the ontology has at least one taxon annotation. This is the pre-classified version of the ontology; the original OWL file is at http://jagannath.pdn.cam.ac.uk/plant/flopo-unclassified.owl | owl | is listed by: BioPortal | nlx_157406 | http://wiki.pro-ibiosphere.eu/wiki/Traits_Task_Group | SCR_010321 | 2026-02-12 09:45:12 | 0 | ||||||||
|
NIF Subcellular Ontology Resource Report Resource Website |
NIF Subcellular Ontology (RRID:SCR_010366) | NIFSUBCELL | data or information resource, ontology, controlled vocabulary | Ontology that contains cell parts and subcellular structures from SAO-CORE and Gene Ontology Cellular Component (GO-CC). http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Subcellular.owl | owl |
is listed by: BioPortal has parent organization: Neuroscience Information Framework |
nlx_157494 | SCR_010366 | Neuroscience Information Framework Subcellular Ontology, Neuroscience Information Framework (NIF) Subcellular Ontology | 2026-02-12 09:45:26 | 0 | ||||||||
|
NMR-Instrument Component of Metabolomics Investigations Ontology Resource Report Resource Website 1+ mentions |
NMR-Instrument Component of Metabolomics Investigations Ontology (RRID:SCR_010367) | NMR | data or information resource, ontology, controlled vocabulary | Metabolomics Standards Initiative-sanctioned ontology, created within the COSMOS EU project, to support the nmrML data standard for nuclear magnetic resonance data in metabolomics with meaningful raw data descriptors. | owl, nuclear magnetic resonance, metabolomics |
is listed by: BioPortal is related to: Metabolomics Standards Initiative has parent organization: nmrCV |
nlx_157495 | SCR_010367 | 2026-02-12 09:45:17 | 1 | |||||||||
|
Ontology of Homology and Related Concepts in Biology Resource Report Resource Website 1+ mentions |
Ontology of Homology and Related Concepts in Biology (RRID:SCR_010400) | HOM | data or information resource, ontology, controlled vocabulary | Ontology that represents concepts related to homology, as well as other concepts used to describe similarity and non-homology. | obo | is listed by: BioPortal | nlx_157532 | SCR_010400 | 2026-02-12 09:45:10 | 1 |
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