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http://purl.bioontology.org/ontology/VARIO
An ontology for standardized, systematic description of effects, consequences and mechanisms of variations.
Proper citation: Variation Ontology (RRID:SCR_000311) Copy
http://purl.bioontology.org/ontology/SEDI
An ontology for DICOM as used in the SeDI project.
Proper citation: Semantic DICOM Ontology (RRID:SCR_000309) Copy
http://purl.bioontology.org/ontology/PHYLONT
Ontology for Phylogenetic Analysis
Proper citation: Phylogenetic Ontology (RRID:SCR_000912) Copy
http://purl.bioontology.org/ontology/ATO
A taxonomy of Amphibia
Proper citation: Amphibian Taxonomy Ontology (RRID:SCR_000906) Copy
http://purl.bioontology.org/ontology/PATHLEX
A comprehensive lexicon - a unified language of anatomic pathology terms - for standardized indexing and retrieval of anatomic pathology information resources.
Proper citation: Anatomic Pathology Lexicon (RRID:SCR_000907) Copy
http://purl.bioontology.org/ontology/HIV
Ontology that encompasses all knowledge about HIV
Proper citation: HIV ontology (RRID:SCR_000908) Copy
http://purl.bioontology.org/ontology/BHO
An application ontology devoted to the standardized recording of phenotypic data related to hemorrhagic disorders.
Proper citation: Bleeding History Phenotype Ontology (RRID:SCR_001165) Copy
http://purl.bioontology.org/ontology/ICD11-BODYSYSTEM
Ontology of a set of body-system terms used in the ICD (International Classification of Diseases) 11 revision
Proper citation: Body System Terms from ICD11 (RRID:SCR_001252) Copy
Private, non profit university in Stanford, California, USA for research and undergraduate and graduate studies. Known for its academic strength, wealth, proximity to Silicon Valley, and ranking as one of the world's top universities. Particularly noted for its entrepreneurship and is one of the most successful universities in attracting funding for start-ups.
Proper citation: Stanford University; Stanford; California (RRID:SCR_011538) Copy
https://www.ebi.ac.uk/chebi/beta/
Collection of chemical compounds and other small molecular entities that incorporates an ontological classification of chemical compounds of biological relevance, whereby the relationships between molecular entities or classes of entities and their parents and/or children are specified. The molecular entities in question are either products of nature or synthetic products used to intervene in the processes of living organisms.
Proper citation: CHEBI (RRID:SCR_002088) Copy
http://purl.bioontology.org/ontology/BCGO
Ontology that assigns a grade to a tumor starting from the 3 criteria of the NGS
Proper citation: Breast Cancer Grading Ontology (RRID:SCR_006658) Copy
http://www.informatics.jax.org/searches/AMA_form.shtml
Ontology that organizes anatomical structures for the adult mouse (Theiler stage 28) spatially and functionally, using ''is a'' and ''part of'' relationships. The ontology is used to describe expression data for the adult mouse and phenotype data pertinent to anatomy in standardized ways. The browser can be used to view anatomical terms and their relationships in a hierarchical display.
Proper citation: Adult Mouse Anatomy Ontology (RRID:SCR_006568) Copy
http://purl.bioontology.org/ontology/SDO
An application ontology for the domain of Sleep Medicine.
Proper citation: Sleep Domain Ontology (RRID:SCR_006808) Copy
http://purl.bioontology.org/ontology/CBO
Ontology that describes multi-cell computational models. In particular to describe both the existential behaviors of cells (spatiality, growth, movement, adhesion, death, ...) and computational models of those behaviors.
Proper citation: Cell Behavior Ontology (RRID:SCR_007055) Copy
http://purl.bioontology.org/ontology/CTX
Ontology that represents CTX phenotypes, genetic variants, and bidirectional relationships between them though a patient model. The CTX ontology was built reusing the Human Phenotype Ontology (HPO) and the Snomed ct ontologies. A set of temporal clinical manifestations are semantically annotated with a domain phenotype ontology and registered with a time-stamped value.
Proper citation: Cerebrotendinous Xanthomatosis Ontology (RRID:SCR_007067) Copy
http://purl.bioontology.org/ontology/CANCO
A vocabulary that is able to describe and semantically interconnect the different paradigms of the cancer chemoprevention domain.
Proper citation: Cancer Chemoprevention Ontology (RRID:SCR_006966) Copy
http://purl.bioontology.org/ontology/CAO
Ontology designed for supporting the COG enrichment study by using Fisher''s exact test
Proper citation: Clusters of Orthologous Groups Analysis Ontology (RRID:SCR_007232) Copy
http://code.google.com/p/rnao/
An ontology to capture all aspects of RNA - from primary sequence to alignments, secondary and tertiary structure from base pairing and base stacking to sophisticated motifs.
Proper citation: RNA Ontology (RRID:SCR_003470) Copy
http://purl.obolibrary.org/obo/flu/
An application ontology established by a collaborative group of influenza researchers that includes consolidated influenza sequence and surveillance terms from resources such as the BioHealthBase (BHB), a Bioinformatics Resource Center (BRC) for Biodefense and Emerging and Re-emerging Infectious Diseases, the Centers for Excellence in Influenza Research and Surveillance (CEIRS)
Proper citation: Influenza Ontology (RRID:SCR_003346) Copy
http://purl.bioontology.org/ontology/MEDO
Ontology of experimental design for high-throughput mouse analysis pipelines.
Proper citation: Mouse Experimental Design Ontology (RRID:SCR_003879) Copy
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