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URL: http://colibread.inria.fr/software/mapsembler2/
Proper Citation: Mapsembler2 (RRID:SCR_024102)
Description: Targeted assembly software. It takes as input any number of NGS raw read sets and starter set of input sequences.May be used to Validate assembled sequence, Check if known enzyme is present in metagenomic NGS read set, Enrich unmappable reads by extending them, Check what happens at the extremities of a contig, Check the presence / absence and quantify RNA seq splicing events, Check presence/absence of SNPs or structural variants.
Synonyms: mapsembler2, Mapsembler
Resource Type: software toolkit, software library, software resource
Defining Citation: PMID:22443449
Keywords: Targeted assembly, NGS raw read, input sequences,
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