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URL: https://github.com/genome/bam-readcount
Proper Citation: bam readcount (RRID:SCR_023653)
Description: Software tool that runs on BAM or CRAM file and generates low level information about sequencing data at specific nucleotide positions. Its outputs include observed bases, readcounts, summarized mapping and base qualities, strandedness information, mismatch counts, and position within the reads.
Synonyms: bam-readcount
Resource Type: software resource, software application
Defining Citation: PMID:34341766
Keywords: BAM file, CRAM file, sequencing data, nucleotide positions,
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Source: SciCrunch Registry
