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URL: https://github.com/zdk123/SpiecEasi
Proper Citation: SpiecEasi (RRID:SCR_022712)
Description: Software R package for microbiome network analysis. Used for inference of microbial ecological networks from amplicon sequencing datasets. Combines data transformations developed for compositional data analysis with graphical model inference framework that assumes underlying ecological association network is sparse.
Abbreviations: SpiecEasi
Synonyms: SParse InversE Covariance Estimation for Ecological Association Inference
Resource Type: data analysis software, software resource, data processing software, software application
Defining Citation: PMID:25950956
Keywords: microbiome network analysis, amplicon sequencing datasets, microbial ecological networks inference
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