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URL: http://phenex.phenoscape.org/
Proper Citation: Phenex (RRID:SCR_021748)
Description: Software application for annotating character matrix files with ontology terms. Character states can be annotated using Entity-Quality syntax, where entity, quality, and possibly related entities are drawn from requisite ontologies. In addition, taxa (the rows of a character matrix) can be annotated with identifiers from taxonomy ontology. Phenex saves ontology annotations alongside original free text character matrix data using new NeXML format standard for evolutionary data.
Resource Type: software resource
Defining Citation: DOI:10.1371/journal.pone.0010500
Keywords: phenotype, ontology, taxonomy ontology, taxa, ontology annotations, free text character matrix data, NeXML, evolutionary data
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