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URL: https://github.com/thackl/cross-species-scaffolding
Proper Citation: Cross-species scaffolding (RRID:SCR_015932)
Description: Software that generates in silico mate-pair reads from single-/paired-end reads of your organism of interest, and a closely related reference genome. It can improve draft genomes by using preferred scaffolding software with the newly created read data. Software that generates in silico mate-pair reads from single-/paired-end reads of your organism of interest, and a closely related reference genome. It can improve draft genomes by using preferred scaffolding software with the newly created read data. Super-scaffolding of draft genome assemblies with in silico mate-pair libraries derived from (closely) related references.
Synonyms: cross-species-scaffolding
Resource Type: sequence analysis software, data processing software, data analysis software, source code, software application, software resource
Keywords: mate, pair, end, reference, genome
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Source: SciCrunch Registry
