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URL: http://bmerc-www.bu.edu/projects/mito/
Proper Citation: Yeast Mitochondrial Protein Database (RRID:SCR_006078)
Description: THIS RESOURCE IS NO LONGER IN SERVICE, documented August 22, 2016. It contains a complete, curated list of yeast genes encoding mitoproteins. The ORF name for each mitoprotein is linked to a page presenting a summary of the Baysian prior-based profile for conserved segments of that protein and statistics describing profile quality. The page also contains a list of homologs identified by the profile that span the widest possible taxonomic breadth. A multi-domain diagram at the bottom of the page displays the relationships between the conserved segments of different homologs and shows any additional sequence domains. Clicking on these initiates BLAST searches against the database of all fully sequenced genomes. A clickable button accesses a full multiple alignment of the profile-matched segments for the homolog set. Phylogenetic trees based on these alignments can also be displayed by clicking appropriate buttons (See How to use YMPD). A complete list of the known mitoproteins classified by functional category has links to the pages for individual mitoproteins in each category
Synonyms: YMPD
Resource Type: data or information resource, database
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