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URL: http://www.cbs.dtu.dk/services/gwBrowser/
Proper Citation: GeneWiz browser (RRID:SCR_001454)
Description: An interactive web application for visualizing genomic data of sequenced prokaryotic chromosomes. It allows users to carry out various analyses such as mapping alignments of homologous genes to other genomes, mapping of short sequencing reads to a reference chromosome, and calculating DNA properties such as curvature or stacking energy along the chromosome. The GeneWiz browser produces an interactive graphic that enables zooming from a global scale down to single nucleotides, without changing the size of the plot. Its ability to disproportionally zoom provides optimal readability and increased functionality compared to other browsers. The tool allows the user to select the display of various genomic features, color setting and data ranges. Custom numerical data can be added to the plot allowing, for example, visualization of gene expression and regulation data. Further, standard atlases are pre-generated for all prokaryotic genomes available in GenBank, providing a fast overview of all available genomes, including recently deposited genome sequences.
Resource Type: service resource, production service resource, analysis service resource
Defining Citation: PMID:21304658
Keywords: genome, chromosome, alignment, homologous gene, mapping, short sequencing reads, reference chromosome
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Source: SciCrunch Registry
