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URL: https://github.com/Neural-Systems-at-UIO/WebAlign
Proper Citation: WebAlign (RRID:SCR_026758)
Description: Web application for 2D image registration to 3D atlas. Used for user guided affine spatial registration (anchoring) of sectional image data, typically high resolution histological images, to 3D reference atlas space. Can generate user defined cut planes through atlas templates that match orientation of cutting plane of 2D experimental images (atlas maps).
Resource Type: software resource, source code, web application
Keywords: 2D image registration, 3D atlas, affine spatial registration, sectional image data, histological images, 3D reference atlas space,
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