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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
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Brain Tumour Foundation of Canada Resource Report Resource Website |
Brain Tumour Foundation of Canada (RRID:SCR_004158) | Brain Tumour Foundation of Canada | institution | Brain Tumour Foundation of Canada is a dedicated team of volunteers, patients, survivors, family members, health care professionals and staff, determined to make the journey with a brain tumor one full of hope and support. We work collaboratively to serve the needs of those Canadians affected by all types of brain tumors. Information, education and support is available and research continues into the cause of and a cure for brain tumors. Every year, thousands of Canadians affected by brain tumors find emotional support and comfort while gaining a better understanding and knowledge of their disease through a range of programs and services available across the country. This includes: up-to-date brain tumor information material, numerous education events and support groups. Important brain tumor research is also supported through annual grants, a fellowship and the brain tumour tissue bank. We welcome donations, large or small. Charitable Registration #BN118816339RR0001 | brain, tumor, cancer, human | is related to: Lawson Brain Tumour Tissue Bank | individuals ; corporations ; employee groups ; memorial gifts |
ISNI: 0000 0004 5900 0419, nlx_143579, Crossref funder ID: 501100000238, grid.478522.e | https://ror.org/04w23ys68 | SCR_004158 | Brain Tumor Foundation of Canada | 2026-02-14 02:00:37 | 0 | ||||||
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Multiple Sclerosis Society Resource Report Resource Website 10+ mentions |
Multiple Sclerosis Society (RRID:SCR_004153) | MS Society | nonprofit organization | The UK''s leading MS charity that provides information and support, funding research and fighting for change. We''re a democratic organization: one member, one vote. We fund research, give grants, campaign for change, provide information and support, invest in MS specialists and lend a listening ear to those who need it. The UK''s biggest MS charity. * 38,000 members have a say in how we''re run. * 9000 volunteers give a million hours every year. * 550 staff work in all four nations of the UK. * Over 300 branches support people with MS locally. * One aim: to beat MS. Our national offices in England, Scotland, Wales and Northern Ireland and our network of 300 branches support people affected by MS locally. | Crossref funder ID: 501100000381, ISNI: 0000 0001 0665 6519, nlx_143577, Wikidata: Q6934907, grid.453295.c | https://ror.org/043fwdk81 | SCR_004153 | 2026-02-14 02:00:41 | 18 | ||||||||||
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PerM Resource Report Resource Website 50+ mentions |
PerM (RRID:SCR_004223) | software resource | THIS RESOURCE IS NO LONGER IN SERVICE. Documented on February 28,2023. Software package to perform highly efficient genome scale alignments for hundreds of millions of short reads produced by the ABI SOLiD and Illumina sequencing platforms. It capable of providing full sensitivity for alignments within 4 mismatches for 50bp SOLID reads and 9 mismatches for 100bp Illumina reads.Efficient mapping of short sequencing reads with periodic full sensitive spaced seeds. | Short sequencing mapping, short sequencing read, next-generation sequencing, genome, alignment, short read, abi, solid, illumina, , bio.tools |
is listed by: OMICtools is listed by: Debian is listed by: bio.tools is related to: Clippers has parent organization: Google Code has parent organization: University of Southern California; Los Angeles; USA |
PMID:19675096 DOI:10.1093/bioinformatics/btp486 |
THIS RESOURCE IS NO LONGER IN SERVICE | OMICS_00675, biotools:perm | https://bio.tools/perm https://sources.debian.org/src/perm/ |
SCR_004223 | PERiodic seed Mapping, Periodic seed Mapping | 2026-02-14 02:00:38 | 60 | ||||||
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Alberta Cancer Foundation Resource Report Resource Website 1+ mentions |
Alberta Cancer Foundation (RRID:SCR_004224) | ACF | institution | The Alberta Cancer Foundation is more than a charity. It''s a movement for cancer-free lives today, tomorrow and forever. It''s a movement of those who know a cancer-free future is possible and who won''t settle for some day. It''s a movement of those who stand with Albertans who have no choice but to stand up to cancer. It''s a movement of those who know something can be done and are willing to do it. For those facing cancer today, in honour of those lost to cancer, and for generations to come, we promise progress. Our mission is to deliver progress in cancer research, prevention, treatment and care by generating community investment for Alberta''s coordinated research strategy, the Cross Cancer Institute, Tom Baker Cancer Centre and 15 other cancer centres throughout the province. The Alberta Cancer Foundation is a Registered Charity - Business Number 11878 0477 RR0001. Your dollar fights cancer on every front: research, prevention, screening, early diagnosis, education, treatment and care. | grid.427879.7, nlx_143639, Crossref funder ID: 501100000001 | https://ror.org/01k1b2g25 | SCR_004224 | 2026-02-14 02:00:55 | 7 | ||||||||||
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HLASeq Resource Report Resource Website |
HLASeq (RRID:SCR_004185) | HLASeq | software resource | An open-source software tool for accurate genotyping the human HLA genes from Illumina GA high-throughput sequencing data. | genotyping, hla, next generation sequencing, gene, command-line, python |
is listed by: OMICtools has parent organization: SourceForge |
GNU General Public License, v3 | OMICS_01543 | SCR_004185 | 2026-02-14 02:00:38 | 0 | ||||||||
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Nathan S. Kline Institute for Psychiatric Research; New York; USA Resource Report Resource Website 1+ mentions |
Nathan S. Kline Institute for Psychiatric Research; New York; USA (RRID:SCR_004334) | NKI | institution | New York State-funded research Institute, located in Orangeburg, New York. |
is related to: New York University; New York; USA is parent organization of: Automatic Registration Toolbox is parent organization of: NKI-RS Enhanced Sample is parent organization of: NKI-RS Multiband Imaging Test-Retest Pilot Dataset |
nlx_151961, grid.250263.0, Wikidata: Q6969183, ISNI: 0000 0001 2189 4777 | https://ror.org/01s434164 | SCR_004334 | Nathan Kline Institute for Psychiatric Research, Nathan Kline Institute, Nathan S. Kline Institute for Psychiatric Research | 2026-02-14 02:00:39 | 1 | ||||||||
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PASS-bis Resource Report Resource Website |
PASS-bis (RRID:SCR_004176) | PASS-bis | software resource | THIS RESOURCE IS NO LONGER IN SERVICE. Documented on January 9, 2023. A bisulfite aligner suitable for whole methylome analysis of Illumina and SOLiD reads. |
is listed by: OMICtools is related to: PASS |
PMID:23162053 | THIS RESOURCE IS NO LONGER IN SERVICE | OMICS_00587 | SCR_004176 | 2026-02-14 02:00:55 | 0 | ||||||||
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Xenopus Anatomy Ontology Resource Report Resource Website 1+ mentions |
Xenopus Anatomy Ontology (RRID:SCR_004337) | XAO | data or information resource, ontology, controlled vocabulary | A structured, controlled vocabulary of the anatomy and development of the African clawed frogs (Xenopus laevis and tropicalis), organized in a graphical structure. Tissues are shown as being part of other tissues and the timing of their development is indicated by start and end stages. The lineage of tissues is represented by develops from relationships between different tissues at different developmental stages. Many items have been classified according to the Common Anatomy Reference Ontology. The Xenopus Anatomical Ontology will be used to annotate Xenopus gene expression patterns and mutant and morphant phenotypes. Its robust developmental map will enable powerful database searches and data analyses. They encourage community recommendations for updates and improvements to the ontology. | obo, anatomy, development |
is listed by: BioPortal is listed by: OBO is related to: Bgee: dataBase for Gene Expression Evolution has parent organization: Xenbase |
AHFMR Senior Scholar award ; NICHD R01HD045776-03 |
PMID:18817563 | The community can contribute to this resource | nlx_35222 | https://xenopus-anatomy-ontology.googlecode.com/svn/trunk/current-release/xenopus_anatomy.obo http://purl.bioontology.org/ontology/XAO http://obofoundry.org/cgi-bin/detail.cgi?id=xenopus_anatomy |
SCR_004337 | Xenopus anatomy and development ontology | 2026-02-14 02:00:42 | 9 | ||||
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Canadian Breast Cancer Foundation Resource Report Resource Website 1+ mentions |
Canadian Breast Cancer Foundation (RRID:SCR_004215) | CBCF | institution | The Canadian Breast Cancer Foundation is the leading national volunteer-based organization in Canada dedicated to creating a future without breast cancer. Established in 1986 by a dedicated group of volunteers, the Foundation works collaboratively to fund, support and advocate for: * Relevant and innovative research, * Meaningful education and awareness programs, * Early diagnosis and effective treatment * A positive quality of life for those living with breast cancer. Our fundraising through our annual Canadian Breast Cancer Foundation CIBC Run for the Cure, special events, corporate sponsorship and donations has enabled the Foundation to allocate millions of dollars in grants for breast cancer projects and services since our inception. Addressing the needs of Canadians from coast to coast, the Canadian Breast Cancer Foundation has regional offices in British Columbia/Yukon Territory, Prairies/NWT, Ontario and the Atlantic Region. The Foundation''s central office is located in Toronto. Charitable Registration No. 12799 3608 RR0001 | is parent organization of: Canadian Breast Cancer Foundation Tumor Bank | ISNI: 0000 0004 0473 5688, nlx_143638, Crossref funder ID: 501100000147, grid.453374.2 | https://ror.org/04n0vf235 | SCR_004215 | Fondation canadienne du cancer du sein | 2026-02-14 02:00:38 | 8 | ||||||||
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Cosmo Bio Co Resource Report Resource Website |
Cosmo Bio Co (RRID:SCR_004296) | commercial organization | An Antibody supplier | ISNI: 0000 0004 0513 0496, nlx_152334, grid.461874.8 | https://ror.org/04d25v571 | SCR_004296 | Cosmo Bio Co. Ltd. | 2026-02-14 02:00:39 | 0 | ||||||||||
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Osiris Therapeutics Resource Report Resource Website 1+ mentions |
Osiris Therapeutics (RRID:SCR_004233) | commercial organization | Stem cell company focused on developing and marketing products to treat medical conditions in the inflammatory, autoimmune, orthopedic and cardiovascular areas. Now part of Smith and Nephew. | stem cell, commercial, company, therapy, inflammation, autoimmune disease, orthopedics, cardiovascular disease | is listed by: One Mind Biospecimen Bank Listing | grid.436931.a, Wikidata: Q7106872, Crossref funder ID: 100007075, ISNI: 0000 0004 0418 0643, nlx_24773 | https://ror.org/03r8s5x58 | SCR_004233 | Smith and Nephew, Osiris Therapeutics Inc., Osiris Therapeutics Inc | 2026-02-14 02:00:38 | 6 | ||||||||
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Rocky Mountain MS Center Resource Report Resource Website |
Rocky Mountain MS Center (RRID:SCR_004354) | Rocky Mountain MS Center | institution | The Rocky Mountain MS Center is a patient-centered organization dedicated to changing the way we think about and treat MS in order to protect the futures of those living with the disease. Our mission is to improve the lives of people with Multiple Sclerosis (MS) and their families through care, support, education and research. * Medical Care and Support: We offer a comprehensive care approach that maximizes and enhances the brain''s ability to protect and repair itself and to promote quality of life for patients and their families. We incorporate wellness, exercise, diet and stress management, and supportive services in addition to the most progressive medical care. * Education: We empower patients, families and health care providers by sharing what we know. There are 10,000 peer reviewed articles published annually; we sort through that information and share the latest advances. * Research: We are pursuing new treatment approaches to save the brain. We are leading the way to assure that we prevent the silent but ongoing brain damage that results in disability. This means treating early and treating aggressively. | multiple sclerosis | is parent organization of: Rocky Mountain MS Center Tissue Bank | grid.419238.5, nlx_143690 | https://ror.org/059kzn841 | SCR_004354 | Rocky Mountain Multiple Sclerosis Center | 2026-02-14 02:00:39 | 0 | |||||||
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DRUT Resource Report Resource Website |
DRUT (RRID:SCR_004351) | DRUT | software resource | Software for Discovery and Reconstruction of Unannotated Transcripts in Partially Annotated Genomes from High-Throughput RNA-Seq Data. | c++, reconstruction, frequency estimation, transcript, rna-seq, annotation |
is listed by: OMICtools has parent organization: Georgia State University; Georgia; USA |
NSF IIS-0546457; NSF IIS-0916401; NSF IIS-0916948 |
PMID:23202426 | OMICS_01273 | SCR_004351 | Discovery and Reconstruction of Unannotated Transcripts | 2026-02-14 02:00:57 | 0 | ||||||
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Kyushu University; Fukuoka; Japan Resource Report Resource Website 1+ mentions |
Kyushu University; Fukuoka; Japan (RRID:SCR_004149) | university | Japanese national university located in Fukuoka, in the island of Kyushu. |
is parent organization of: Signaling Pathway Database is parent organization of: Kyushu University Definitive Haplotype Database is parent organization of: ChIP-Atlas |
nlx_23378, Wikidata:Q1188786, ISNI:0000 0001 2242 4849, grid.177174.3, Crossref funder ID:501100004096 | https://ror.org/00p4k0j84 | SCR_004149 | 2026-02-14 02:00:55 | 1 | ||||||||||
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Alzheimer Society of Ireland Resource Report Resource Website |
Alzheimer Society of Ireland (RRID:SCR_004300) | Alzheimer Society of Ireland | nonprofit organization | The Alzheimer Society of Ireland is the leading dementia specific service provider in Ireland. The Society is a company limited by guarantee and a registered charity - CHY 7868. The Society was founded in 1982 by a small group of people who were caring for a family member with Alzheimer''s Disease or a related dementia. Today, it is a national voluntary organization with an extensive national network of branches, regional offices and services that aims to provide people with all forms of dementia, their families and carers with the necessary support to maximize their quality of life. As the major dementia-specific service provider in Ireland, The Society''s network includes over 100 dementia specific services such as day care centers, home care services, carer support groups, social clubs, a national respite center and an advocacy service. The Society also operates the Alzheimer National Helpline Service offering information and support to anyone affected by Alzheimer''s disease / dementia at 1800 341 341. For a full list of services in your area please see the We Can Help section. The Society comprises over 2,500 members, 300 volunteers and over 700 full and part-time staff. The Society has 6 regional offices and a network of Branches around the country. A number of core functions are operated through our national office including information, policy and research, fundraising, public relations, training and finance. | alzheimers disease, dementia | grid.496983.9, nlx_143672 | https://ror.org/00hv7e130 | SCR_004300 | Alzheimers Society of Ireland, Alzheimer''s Society of Ireland | 2026-02-14 02:00:42 | 0 | ||||||||
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Guthy-Jackson Charitable Foundation Resource Report Resource Website 1+ mentions |
Guthy-Jackson Charitable Foundation (RRID:SCR_004441) | Guthy-Jackson Charitable Foundation | funding resource | The Guthy-Jackson Charitable Foundation is dedicated to funding basic science research to find answers that will lead to the prevention, clinical treatment programs and a potential cure for Neuromyelitis Optica (NMO) Spectrum Disease. The decision to create our Foundation came from a personal family crisis. Our daughter was officially diagnosed with NMO in June 2008. Since that time, we have met with many clinicians and researchers in order to understand what this means for our beautiful daughter and our family. Additionally, we have gathered and read every piece of information and NMO research article that is available on the Web. We are now beginning to understand that NMO is not only considered an orphan disease, but that very little research is available. We met with the All Greater Good Foundation in early July 2008 when it became clear that there is little-to-no funding available to research this rare and often misunderstood disease. We joined hands with the All Greater Good Foundation to immediately begin our work, and thus, The Guthy-Jackson Charitable Foundation was born. The Guthy-Jackson Charitable Foundation is dedicated to funding biomedical research in the search to understand the pathophysiology and biochemistry of NMO Spectrum Disease. It is our greatest hope that together we will reverse the effects of NMO and eventually cure this disease. | is parent organization of: Guthy-Jackson Repository for Neuromyelitis Optica | nlx_43879 | SCR_004441 | 2026-02-14 02:00:44 | 1 | ||||||||||
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dkCOIN Resource Report Resource Website 1+ mentions |
dkCOIN (RRID:SCR_004438) | dkCOIN | data or information resource, database, resource | THIS RESOURCE IS NO LONGER IN SERVICE, documented October 13, 2014. The resource has moved to the NIDDKInformation Network (dkNET) project. Contact them at info_at_dknet.org with any questions. Database of large pools of data relevant to the mission of NIDDKwith the goal of developing a community-based network for integration across disciplines to include the larger DKuniverse of diseases, investigators, and potential users. The focus is on greater use of this data with the objective of adding value by breaking down barriers between sites to facilitate linking of different datasets. To date (2013/06/10), a total of 1,195 resources have been associated with one or more genes. Of 11,580 total genes associated with resources, the ten most represented are associated with 359 distinct resources. The main method by which they currently interconnect resources between the providers is via EntrezGene identifiers. A total of 780 unique genes provide the connectivity between 3,159 resource pairs across consortia. To further increase interconnectivity, the groups have been further annotating their data with additional gene identifiers, publications, and ontology terms from selected Open Biological and Biomedical Ontologies (OBO). | gene, adenovirus construct, antibody, co-immunoprecipitation, embryonic stem cell line, functional genomics, histology, mouse strain, pcr primer, protocol, real time pcr, metadata, diabetes, stem cell, metabolism, tissue development, web service, cloud, embryonic stem cell |
is used by: NIF Data Federation is related to: Beta Cell Biology Consortium is related to: NIDDK Information Network (dkNET) is related to: National Mouse Metabolic Phenotyping Centers is related to: Nuclear Receptor Signaling Atlas is related to: Diabetic Complications Consortium is related to: T1DBase is related to: OBO has parent organization: NIDDK - National Institute of Diabetes and Digestive and Kidney Diseases |
NIDDK 3U01DK072473-05S3; NIDDK 5U24DK076169; NIDDK U19DK062434 |
PMID:22734043 | THIS RESOURCE IS NO LONGER IN SERVICE | nlx_44256 | SCR_004438 | NIDDKConsortium Interconnectivity Network | 2026-02-14 02:00:41 | 1 | |||||
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MPI Research Resource Report Resource Website 1+ mentions |
MPI Research (RRID:SCR_004397) | MPI | commercial organization | MPI Research exists to provide comprehensive discovery, safety evaluation, bioanalytical, and analytical services that meet the requirements of biopharmaceutical, medical device, animal health, and chemical companies as we partner globally to bring safer and more effective products to the world. Our goal is to exceed the expectations of our Sponsors and maintain the highest respect in our industry by providing customized, responsive, and on-time services that add value to our Sponsors'' efforts to discover, develop, and enhance products in regulated international environments. We excel as a high performance, high quality organization because of our scientific knowledge and experience, integrity, trust, teamwork, and dedication to strong and enduring Sponsor relationships. MPI Research has conducted thousands of drug safety, discovery, bioanalytical, and analytical studies. We offer extensive support and resources including, but not limited to * A wide and diverse range of classes of compounds * All routes of administration except inhalation * Studies with numerous species and models * Comprehensive reporting capabilities Flexibility and ample capacity enable us to * Accommodate multiple requirements simultaneously * Adjust schedules readily * Produce results quickly Responding to a broad spectrum of research needs: Working in partnership with pharmaceutical, biotech, medical device, and chemical companies, we conduct customized preclinical research throughout the discovery and development process, from early proof of concept testing to regulatory submissions, including IND, EPA/OPPTS, NDA, PMA, and 510K. | biomarker, metabolome, gc/ms/ms, contract research organization, bioanalytical services, cns biomarker | ISNI: 0000 0004 0445 7016, nlx_143716, grid.421937.a | https://ror.org/03dqpq202 | SCR_004397 | 2026-02-14 02:00:40 | 1 | |||||||||
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CAMO - Cell Adhesion Molecule Ontology Resource Report Resource Website 1+ mentions |
CAMO - Cell Adhesion Molecule Ontology (RRID:SCR_004392) | CAMO | data or information resource, ontology, controlled vocabulary | CAMO (Cell Adhesion Molecule Ontology) is a set of standard vocabulary that provide a hierarchical description of cell adhesion molecules and their functions. We compiled a list for cell adhesion molecules by integrating Gene Ontology annotations, domain structure information, and keywords query against NCBI Entrez Gene annotations. Totally 496 unique human genes were identified to function as cell adhesion molecules, which is by far the most comprehensive dataset including cadherin, immunoglobulin/FNIII, integrin, neurexin, neuroligan, and catenin families. CAMO was constructed as a directed acyclic graph (DAG) using DAG-Edit to input, manage and update data. We annotated each term with name, definition and source references, as well as the relationship to other terms, based on manual reviews of domain architecture and functional annotations. If vertices represent terms and the relationships between terms are represented by edges, the terms in a DAG can be connected via a directed graph without cycles. CAMO thus provides a hierarchical description of functions of CAMs with five top-level categories: CAM gene families, CAM genetics, CAM regulation, CAM expression and CAM diseases. Each top-level term is further divided into several categories to describe the functions in detail. | cell adhesion, molecule, function, cell adhesion molecule |
has parent organization: Peking University; Beijing; China has parent organization: OKCAM: Ontology-based Knowledgebase for Cell Adhesion Molecules |
NIDA | nlx_40219 | SCR_004392 | Cell Adhesion Molecule Ontology | 2026-02-14 02:00:43 | 2 | |||||||
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Office of the NCI Director Resource Report Resource Website |
Office of the NCI Director (RRID:SCR_004391) | CO, | government granting agency | has parent organization: National Cancer Institute | SCR_004391 | National Cancer Institute Office of the Director | 2026-02-14 02:00:57 | 0 |
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