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Resource Name Proper Citation Abbreviations Resource Type Description Keywords Resource Relationships Related Condition Funding Defining Citation Availability Website Status Alternate IDs Alternate URLs Old URLs Parent Organization Resource ID Synonyms Record Last Update Mentions Count
Read Codes Clinical Terms Version 3
 
Resource Report
Resource Website
1+ mentions
Read Codes Clinical Terms Version 3 (RRID:SCR_006055) RCD data or information resource, ontology, controlled vocabulary Ontology of clinical terms Version 3 (CTV3) (Read Codes) (Q199): National Health Service National Coding and Classification Centre umls is listed by: BioPortal nlx_157570 SCR_006055 Read Codes CTV3, Read Codes Clinical Terms Version 3 (CTV3) 2026-02-14 02:01:14 1
Randomized Controlled Trials Ontology
 
Resource Report
Resource Website
Randomized Controlled Trials Ontology (RRID:SCR_005992) RCTONT data or information resource, ontology, controlled vocabulary Ontology specifically for Randomized Controlled Trials in order to facilitate the production of systematic reviews and metaanalysis. owl is listed by: BioPortal nlx_157568 SCR_005992 2026-02-14 02:01:01 0
Regulation of Transcription Ontology
 
Resource Report
Resource Website
Regulation of Transcription Ontology (RRID:SCR_006238) RETO data or information resource, ontology, controlled vocabulary An application ontology for the domain of gene transcription regulation. The ontology integrates fragments of GO and MI with data from GOA, IntAct, UniProt, NCBI, KEGG and orthology relations. obo is listed by: BioPortal nlx_157573 SCR_006238 2026-02-14 02:01:14 0
Ontology for Biomedical Investigations
 
Resource Report
Resource Website
10+ mentions
Ontology for Biomedical Investigations (RRID:SCR_006266) OBI data or information resource, ontology, controlled vocabulary An ontology for the description of biological and clinical investigations built with international, collaborative effort. The ontology represents the design of an investigation, the protocols and instrumentation used, the material used, the data generated and the type analysis performed on it. This includes a set of universal terms that are applicable across various biological and technological domains, and domain-specific terms relevant only to a given domain. Currently OBI is being built under the Basic Formal Ontology (BFO). This project was formerly titled the Functional Genomics Investigation Ontology (FuGO) project. life-science, clinical, investigation, biomedical, protocol, instrumentation, experiment, biology, owl, molecular, cellular, organismal, multi-organismal is used by: Information Artifact Ontology
is used by: Beta Cell Genomics Ontology
is listed by: FORCE11
is listed by: BioPortal
is listed by: OBO
is related to: Information Artifact Ontology
is related to: Chemical Methods Ontology
is related to: Genomic Standards Consortium
PMID:20626927 Creative Commons Attribution License v3 nif-0000-06698 http://purl.obofoundry.org/obo/obi.owl
http://purl.obofoundry.org/obo/obi
https://www.force11.org/node/4700
SCR_006266 OBI Ontology 2026-02-14 02:01:06 19
OMIM
 
Resource Report
Resource Website
5000+ mentions
OMIM (RRID:SCR_006437) OMIM, MIM data or information resource, database, catalog Online catalog of human genes and genetic disorders, for clinical features, phenotypes and genes. Collection of human genes and genetic phenotypes, focusing on relationship between phenotype and genotype. Referenced overviews in OMIM contain information on all known mendelian disorders and variety of related genes. It is updated daily, and entries contain copious links to other genetics resources. gene, genetics, phenotype, genotype, genetic loci, mutation, clinical, trait, disorder, umls, ontology, gold standard, FASEB list is used by: Human Phenotype Ontology
is used by: NIF Data Federation
is used by: MitoMiner
is used by: Schizo-Pi
is used by: GEMINI
is used by: MARRVEL
is used by: HmtPhenome
is listed by: BioPortal
is listed by: OMICtools
is related to: HomoloGene
is related to: TopoSNP
is related to: phenomeNET
is related to: Integrated Gene-Disease Interaction
is related to: OMIA - Online Mendelian Inheritance in Animals
is related to: Europhenome Mouse Phenotyping Resource
is related to: Homophila
is related to: Biomine
is related to: MalaCards
is related to: PhenoTips
is related to: KOBAS
is related to: Integrated Manually Extracted Annotation
is related to: aGEM
is related to: biomaRt
has parent organization: Johns Hopkins University School of Medicine; Baltimore, Maryland; USA
has parent organization: NCBI
works with: Human Mouse Disease Connection
works with: Database of genes related to Repeat Expansion Diseases
Genetic disorder, Mendelian disorder, Developmental disorder PMID:22477700
PMID:22470145
PMID:21472891
PMID:19728286
PMID:18842627
PMID:18428346
PMID:17642958
PMID:17357067
PMID:15608251
PMID:15360913
PMID:11752252
PMID:10845565
PMID:10612823
PMID:9805561
PMID:7937048
PMID:1867277
Restricted nif-0000-03216, r3d100010416, OMICS_00278 http://www.ncbi.nlm.nih.gov/sites/entrez?db=omim
http://www.ncbi.nlm.nih.gov/Omim/
http://purl.bioontology.org/ontology/OMIM
https://doi.org/10.17616/R3188W
SCR_006437 Online Mendelian Inheritance in Man, OMIM - Online Mendelian Inheritance in Man, MIM, The Online Mendelian Inheritance in Man Morbid Map 2026-02-14 02:01:17 5456
EDAM Ontology
 
Resource Report
Resource Website
1+ mentions
EDAM Ontology (RRID:SCR_006620) EDAM data or information resource, ontology, controlled vocabulary An ontology of bioinformatics operations (tool, application, or workflow functions), types of data including identifiers, topics (application domains), and data formats. The applications of EDAM are within organizing tools and data, finding suitable tools in catalogues, and integrating them into complex applications or workflows. Semantic annotations with EDAM are applicable to diverse entities such as for example Web services, databases, programmatic libraries, standalone tools and toolkits, interactive applications, data schemas, data sets, or publications within bioinformatics. Annotation with EDAM may also contribute to data provenance, and EDAM terms and synonyms can be used in text mining. EDAM - and in particular the EDAM Data sub-ontology - serves also as a markup vocabulary for bioinformatics data on the Semantic Web. bioinformatics, operation, data, topic, type, identifier, format, semantic annotation, obo format, owl is listed by: BioPortal
is related to: DRCAT Resource Catalogue
is related to: bioDBcore
has parent organization: European Bioinformatics Institute
Acknowledgement required, Permission required nlx_151281 http://purl.bioontology.org/ontology/EDAM SCR_006620 EMBRACE Data and Methods Ontology, EDAM Ontology - Bioinformatics operations types of data topics and data formats, EMBRACE Data And Methods 2026-02-14 02:01:19 9
Bone Dysplasia Ontology
 
Resource Report
Resource Website
Bone Dysplasia Ontology (RRID:SCR_006588) BDO data or information resource, ontology, controlled vocabulary Ontology that provides a comprehensive and formal representation of the different domain concepts involved in documenting the full complexity of the skeletal dysplasia domain. It captures and combines the genetic features that discriminate the bone dysplasias with the multitude of phenotypic characteristics manifested by patients and required to be taken into account in order to support the diagnosis process. owl is listed by: BioPortal Bone Dysplasia nlx_157340 SCR_006588 2026-02-14 02:01:19 0
RxNorm
 
Resource Report
Resource Website
500+ mentions
RxNorm (RRID:SCR_006645) RxNorm data or information resource, ontology, controlled vocabulary Ontology that provides a normalized naming system for generic and branded drugs and a tool for supporting semantic interoperation between drug terminologies and pharmacy knowledge base systems. It contains the names of prescription and many over-the-counter drugs available in the United States and links its names to many of the drug vocabularies commonly used in pharmacy management and drug interaction software. It can mediate messages between systems not using the same software and vocabulary. * RxNorm Download Files - contain data consistent with the 2013AB UMLS Metathesaurus Release Files. * RxNorm API - web service for accessing the current RxNorm data set. * RxNorm Browser (RxNav) - a browser for several drug information sources, including RxNorm, RxTerms and National Drug File - Reference Terminology (NDF-RT) . * Current Prescribable Content - subset of currently prescribable drugs found in RxNorm. * RxTerms Drug Interface Terminology - a drug interface terminology derived from RxNorm for prescription writing or medication history recording umls, drug, pharmacy, clinical, drug pack, medicine, unique identifier, prescribable drug, web service, metathesaurus, generic drug, branded drug, data set, web service, database is listed by: BioPortal
has parent organization: National Library of Medicine
PMID:22426081 Account required, (UMLS Terminology Services (UTS)) nif-0000-02575 SCR_006645 Rx Norm 2026-02-14 02:01:13 612
LexGrid
 
Resource Report
Resource Website
1+ mentions
LexGrid (RRID:SCR_006627) LexGrid software resource LexGrid (Lexical Grid) provides support for a distributed network of lexical resources such as terminologies and ontologies via standards-based tools, storage formats, and access/update mechanisms. The Lexical Grid Vision is for a distributed network of terminological resources. It is the foundation of the National Center for Biomedical Ontology BioPortal interface and web-services, and can parse OBO format, as well as other formats such as OWL. Currently, there are many terminologies and ontologies in existence. Just about every terminology has its own format, its own set of tools, and its own update mechanisms. The only thing that most of these pieces have in common with each other is their incompatibility. This makes it very hard to use these resources to their full potential. We have designed the Lexical Grid as a way to bridge terminologies and ontologies with a common set of tools, formats and update mechanisms. The Lexical Grid is: * accessible through a set of common APIs * joined through shared indices * online accessible * downloadable * loosely coupled * locally extendable * globally revised * available in web-space on web-time * cross-linked The realization of this vision requires three interlocking components, which are: * Standards - access methods and formats need to be published and openly available * Tools - standards based tools must be readily available * Content - commonly used terminologies have to be available for access and download Platform: Windows compatible, Mac OS X compatible, Linux compatible, Unix compatible software library, parse, ontology is listed by: BioPortal
is listed by: Gene Ontology Tools
is related to: Gene Ontology
is related to: OBO
has parent organization: European Bioinformatics Institute
has parent organization: National Cancer Institute
NIH ;
Cancer Biomedical Informatics Grid ;
NLM LM07319
PMID:19261933 Free for academic use nlx_149194 http://www.lexgrid.org/ SCR_006627 Lexical Grid 2026-02-14 02:01:20 1
Botryllus schlosseri anatomy and development ontology
 
Resource Report
Resource Website
Botryllus schlosseri anatomy and development ontology (RRID:SCR_006602) BSAO data or information resource, ontology, controlled vocabulary Ontology describing the anatomy and the development of Botryllus schlosseri. obo is listed by: BioPortal nlx_157342 SCR_006602 2026-02-14 02:01:12 0
Breast Tissue Cell Lines Ontology
 
Resource Report
Resource Website
Breast Tissue Cell Lines Ontology (RRID:SCR_006686) MCBCC data or information resource, ontology, controlled vocabulary Ontology covering a comprehensive list of cell lines derived from breast tissue, both normal and pathological. The ontology in built in OWL with cross relation to classes- genetic variation, pathological condition, genes, chemicals and drugs. The relations built enable semantic query across different classes owl is listed by: BioPortal nlx_157344 SCR_006686 2026-02-14 02:01:14 0
Bioassay Ontology
 
Resource Report
Resource Website
1+ mentions
Bioassay Ontology (RRID:SCR_002638) BAO data or information resource, ontology, controlled vocabulary Ontology to describe and categorize chemical biology and drug screening assays and their results including high-throughput screening (HTS) data for the purpose of categorizing assays and data analysis. BAO is an extensible, knowledge-based, highly expressive (currently SHOIQ(D)) description of biological assays making use of descriptive logic based features of the Web Ontology Language (OWL). BAO currently has over 700 classes and also makes use of several other ontologies. It describes several concepts related to biological screening, including Perturbagen, Format, Meta Target, Design, Detection Technology, and Endpoint. Perturbagens are perturbing agents that are screened in an assay; they are mostly small molecules. Assay Meta Target describes what is known about the biological system and / or its components interrogated in the assay (and influenced by the Perturbagen). Meta target can be directly described as a molecular entity (e.g. a purified protein or a protein complex), or indirectly by a biological process or event (e.g. phosphorylation). Format describes the biological or chemical features common to each test condition in the assay and includes biochemical, cell-based, organism-based, and variations thereof. The assay Design describes the assay methodology and implementation of how the perturbation of the biological system is translated into a detectable signal. Detection Technology relates to the physical method and technical details to detect and record a signal. Endpoints are the final HTS results as they are usually published (such as IC50, percent inhibition, etc). BAO has been designed to accommodate multiplexed assays. All main BAO components include multiple levels of sub-categories and specification classes, which are linked via object property relationships forming an expressive knowledge-based representation. chemical biology, drug screening, assay, perturbation, high-throughput screening, owl is used by: LINCS Information Framework
is listed by: BioPortal
is parent organization of: G Protein-Coupled Receptor BioAssays Ontology
Free, Freely available nlx_156065 SCR_002638 2026-02-14 02:00:28 7
Gene Ontology
 
Resource Report
Resource Website
10000+ mentions
Gene Ontology (RRID:SCR_002811) GO knowledge environment resource, portal, consortium, data or information resource, organization portal, project portal Computable knowledge regarding functions of genes and gene products. GO resources include biomedical ontologies that cover molecular domains of all life forms as well as extensive compilations of gene product annotations to these ontologies that provide largely species-neutral, comprehensive statements about what gene products do. Used to standardize representation of gene and gene product attributes across species and databases. gene, product, annotation, molecular, function, cellular, biological, role, database, query, obo, gold standard, bio.tools, FASEB list is used by: NIF Data Federation
is used by: GreenPhylDB
is used by: LIPID MAPS Proteome Database
is used by: Aging Portal
is used by: ChannelPedia
is used by: Open PHACTS
is used by: CoPub
is used by: PhenoGO
is used by: Database for Annotation Visualization and Integrated Discovery
is used by: MitoMiner
is used by: dcGO
is used by: Pathway Analysis Tool for Integration and Knowledge Acquisition
is used by: barleyGO
is used by: SynGO
is used by: Functional Annotation
is used by: SwissLipids
is listed by: BioPortal
is listed by: OBO
is listed by: OMICtools
is listed by: bio.tools
is listed by: Debian
is affiliated with: Mouse Genome Informatics: The Gene Ontology Project
is related to: GenNav
is related to: SynaptomeDB
is related to: High-Throughput GoMiner
is related to: Onto-Design
is related to: OnEx - Ontology Evolution Explorer
is related to: Avadis
is related to: GONUTS
is related to: PiNGO
is related to: Automated Microarray Pipeline
is related to: categoryCompare
is related to: globaltest
is related to: Semantic Measures Library
is related to: WegoLoc
is related to: AnimalTFDB
is related to: MEME Suite - Motif-based sequence analysis tools
is related to: Arabidopsis Hormone Database
is related to: DAVID
is related to: Arabidopsis thaliana Protein Interactome Database
is related to: TM4 Microarray Software Suite - TIGR MultiExperiment Viewer
is related to: pSTIING
is related to: GoMiner
is related to: FunSimMat
is related to: GeneSpeed- A Database of Unigene Domain Organization
is related to: Centre for Modeling Human Disease Gene Trap Resource
is related to: Patterns of Gene Expression in Drosophila Embryogenesis
is related to: Babelomics
is related to: BioPerl
is related to: GeneCruiser
is related to: GOLEM An interactive, graphical gene-ontology visualization, navigation, and analysis tool
is related to: GOToolBox Functional Investigation of Gene Datasets
is related to: Cotton EST Database
is related to: MouseNET
is related to: PLANTTFDB
is related to: T-profiler
is related to: Physico-Chemical Process
is related to: Integrated Molecular Interaction Database
is related to: SEGS
is related to: GOCat
is related to: Quantitative Enrichment of Sequence Tags
is related to: Neural-Immune Gene Ontology
is related to: INMEX
is related to: StRAnGER
is related to: QuickGO
is related to: Repository of molecular brain neoplasia data
is related to: Cardiovascular Gene Ontology Annotation Initiative
is related to: PANTHER
is related to: Short Time-series Expression Miner (STEM)
is related to: DATFAP
is related to: GORetriever
is related to: Gene Ontology Browsing Utility (GOBU)
is related to: GeneTools
is related to: GOSlimViewer
is related to: go-moose
is related to: Network Ontology Analysis
is related to: Onto-Compare
is related to: Onto-Express
is related to: OntoVisT
is related to: STRAP
is related to: CGAP GO Browser
is related to: COBrA
is related to: Gene Class Expression
is related to: GeneInfoViz
is related to: GOfetcher
is related to: GoFish
is related to: GOProfiler
is related to: GOanna
is related to: Manatee
is related to: Pandora - Protein ANnotation Diagram ORiented Analysis
is related to: TAIR Keyword Browser
is related to: Wandora
is related to: GOTaxExplorer
is related to: Onto-Miner
is related to: Onto-Translate
is related to: ToppGene Suite
is related to: DBD - Slim Gene Ontology
is related to: ONTO-PERL
is related to: Blip: Biomedical Logic Programming
is related to: OWL API
is related to: CLENCH
is related to: BiNGO: A Biological Networks Gene Ontology tool
is related to: CateGOrizer
is related to: FuSSiMeG: Functional Semantic Similarity Measure between Gene-Products
is related to: ProteInOn
is related to: GeneMerge
is related to: GraphWeb
is related to: ClueGO
is related to: CLASSIFI - Cluster Assignment for Biological Inference
is related to: GOHyperGAll
is related to: FuncAssociate: The Gene Set Functionator
is related to: GOdist
is related to: FuncExpression
is related to: FunCluster
is related to: FIVA - Functional Information Viewer and Analyzer
is related to: GARBAN
is related to: GOEx - Gene Ontology Explorer
is related to: SGD Gene Ontology Slim Mapper
is related to: GOArray
is related to: SNPsandGO
is related to: GoSurfer
is related to: GOtcha
is related to: MAPPFinder
is related to: GoAnnotator
is related to: MetaGeneProfiler
is related to: OntoGate
is related to: ProfCom - Profiling of complex functionality
is related to: SerbGO
is related to: SOURCE
is related to: Ontologizer
is related to: THEA - Tools for High-throughput Experiments Analysis
is related to: Generic GO Term Mapper
is related to: GREAT: Genomic Regions Enrichment of Annotations Tool
is related to: GoBean - a Java application for Gene Ontology enrichment analysis
is related to: TXTGate
is related to: GO-Module
is related to: IT-GOM: Integrated Tool for IC-based GO Semantic Similarity Measures
is related to: G-SESAME - Gene Semantic Similarity Analysis and Measurement Tools
is related to: MalaCards
is related to: FSST - Functional Similarity Search Tool
is related to: Expression Profiler
is related to: GOChase
is related to: GoPubMed
is related to: Whatizit
is related to: REViGO
is related to: WEGO - Web Gene Ontology Annotation Plot
is related to: Blast2GO
is related to: InterProScan
is related to: PubSearch
is related to: TrED
is related to: CharProtDB: Characterized Protein Database
is related to: VirHostNet: Virus-Host Network
is related to: Pathbase
is related to: GO Online SQL Environment (GOOSE)
is related to: Neurobehavior Ontology
is related to: InterSpecies Analysing Application using Containers
is related to: KOBAS
is related to: ConceptWiki
is related to: GeneTerm Linker
is related to: Bioconductor
is related to: ErmineJ
is related to: Gene Ontology For Functional Analysis (GOFFA)
is related to: MGI GO Browser
is related to: Comparative Toxicogenomics Database (CTD)
is related to: GOEAST - Gene Ontology Enrichment Analysis Software Toolkit
is related to: Ontology Lookup Service
is related to: LexGrid
is related to: WebGestalt: WEB-based GEne SeT AnaLysis Toolkit
is related to: g:Profiler
is related to: OwlSim
is related to: GOrilla: Gene Ontology Enrichment Analysis and Visualization Tool
is related to: YeTFaSCo
is related to: FastSemSim
is related to: RamiGO
is related to: AutismKB
is related to: GeneCodis
is related to: FunSpec
is related to: FunNet - Transcriptional Networks Analysis
is related to: PhenoM - Phenomics of yeast Mutants
is related to: agriGO
is related to: GOblet
is related to: DynGO
is related to: SeqExpress
is related to: ProbeExplorer
is related to: ECgene: Gene Modeling with Alternative Splicing
is related to: Organelle DB
is related to: Gemma
is related to: Candidate Genes to Inherited Diseases
is related to: Proteome Analyst PA-GOSUB
is related to: Network Analysis, Visualization and Graphing TORonto
is related to: GOstat
is related to: Onto-Express To Go (OE2GO)
is related to: Tk-GO
is related to: EGAN: Exploratory Gene Association Networks
is related to: Spotfire
is related to: GOMO - Gene Ontology for Motifs
is related to: GFINDer: Genome Function INtegrated Discoverer
is related to: Generic GO Term Finder
is related to: Agile Protein Interactomes DataServer
is related to: AgingDB
is related to: UBERON
is related to: Algal Functional Annotation Tool
is related to: gsGator
is related to: Flash Gviewer
is related to: Cerebellar Development Transcriptome Database
is related to: PlantNATsDB - Plant Natural Antisense Transcripts DataBase
is related to: EASE: the Expression Analysis Systematic Explorer
is related to: PiGenome
is related to: L2L Microarray Analysis Tool
is related to: MeGO
is related to: CELDA Ontology
is related to: Diabetes Disease Portal
is related to: MatrixDB
is related to: Kidney and Urinary Pathway Knowledge Base
is related to: MouseCyc
is related to: Candida Genome Database
is related to: Honey Bee Brain EST Project
is related to: ECO
is related to: FlyMine
is related to: Gramene
is related to: 3D-Interologs
is related to: Biomine
is related to: UniProtKB
is related to: NCBI BioSystems Database
is related to: EBIMed
is related to: Coremine Medical
is related to: EMAGE Gene Expression Database
is related to: GeneMANIA
is related to: Yeast Search for Transcriptional Regulators And Consensus Tracking
is related to: GeneTrail
is related to: Magic
is related to: Mouse Genome Informatics (MGI)
is related to: FlyBase
is related to: InterPro
is related to: InnateDB
is related to: canSAR
is related to: HPRD - Human Protein Reference Database
is related to: CRCView
is related to: Integrated Manually Extracted Annotation
is related to: LegumeIP
is related to: Renal Disease Portal
is related to: PhenoGO
is related to: DOAF
is related to: OBO
is related to: biomaRt
is related to: OncoboxPD
is parent organization of: AmiGO
is parent organization of: GOlr
is parent organization of: RefGenome
is parent organization of: OBO-Edit
is parent organization of: OWLTools
is parent organization of: Gene Ontology Tools
is parent organization of: Gene Ontology Extension
is parent organization of: SO
is parent organization of: go-db-perl
is parent organization of: go-perl
works with: topGO
works with: DIANA-mirPath
works with: GOnet
European Union QLRI-CT-2001-0098;
European Union QLRI-CT-2001-00015;
NHGRI P41 HG002273
PMID:23161678
PMID:10802651
Free, Freely available, Available for download biotools:go, OMICS_02278, nif-0000-02915 http://bioportal.bioontology.org/ontologies/GO
https://bio.tools/go
SCR_002811 the Gene Ontology, GO, Gene Ontology Resource, Gene Ontology 2026-02-14 02:00:32 10623
Mosquito Insecticide Resistance Ontology
 
Resource Report
Resource Website
Mosquito Insecticide Resistance Ontology (RRID:SCR_003864) MIRO data or information resource, ontology, controlled vocabulary Application ontology for entities related to insecticide resistance in mosquitos obo is listed by: BioPortal nlx_157486 SCR_003864 2026-02-14 02:00:32 0
Mouse Gross Anatomy and Development Ontology
 
Resource Report
Resource Website
Mouse Gross Anatomy and Development Ontology (RRID:SCR_003891) EMAP data or information resource, ontology, controlled vocabulary A structured controlled vocabulary of stage-specific anatomical structures of the mouse (Mus). obo is listed by: BioPortal nlx_157488 SCR_003891 2026-02-14 02:00:33 0
Minimal Standard Terminology of Digestive Endoscopy - French
 
Resource Report
Resource Website
Minimal Standard Terminology of Digestive Endoscopy - French (RRID:SCR_003830) MSTDE-FRE data or information resource, ontology, controlled vocabulary Metathesaurus Version of Minimal Standard Terminology Digestive Endoscopy, French Translation, 2001 umls is listed by: BioPortal nlx_157484 SCR_003830 Minimal Standard Terminology of Digestive Endoscopy French 2026-02-14 02:00:52 0
Systematized Nomenclature of Medicine - Clinical Terms
 
Resource Report
Resource Website
1+ mentions
Systematized Nomenclature of Medicine - Clinical Terms (RRID:SCR_003915) SNOMEDCT data or information resource, ontology, controlled vocabulary Ontology of SNOMED (Systematized Nomenclature of Medicine) clinical terms. umls is listed by: BioPortal nlx_157603 SCR_003915 2026-02-14 02:00:33 2
Mouse Pathology Ontology
 
Resource Report
Resource Website
Mouse Pathology Ontology (RRID:SCR_003950) MPATH data or information resource, ontology, controlled vocabulary A structured controlled vocabulary of mutant and transgenic mouse pathology phenotypes obo is listed by: BioPortal
has parent organization: Pathbase
nlx_157489 SCR_003950 2026-02-14 02:00:53 0
NHS Quality Indicators
 
Resource Report
Resource Website
1+ mentions
NHS Quality Indicators (RRID:SCR_004005) NHSQI2009 data or information resource, ontology, controlled vocabulary Ontology to organise a 2009 set of over 200 NHS quality indicators from different sources. Relationships between indicators, a basic set of inclusion / exclusion criteria, clinical pathway, clinical code and purpose (per 1992 Institute of Medicine, originally intended to categorise clinical guidelines) are identifies and made searchable. protege is listed by: BioPortal nlx_157491 SCR_004005 2026-02-14 02:00:39 1
Ontology of Physics for Biology
 
Resource Report
Resource Website
Ontology of Physics for Biology (RRID:SCR_004144) OPB data or information resource, ontology, controlled vocabulary A reference ontology of classical physics as applied to the dynamics of biological systems. It is designed to encompass the multiple structural scales (multiscale atoms to organisms) and multiple physical domains (multidomain fluid dynamics, chemical kinetics, particle diffusion, etc.) that are encountered in the study and analysis of biological organisms. owl is listed by: BioPortal nlx_157536 SCR_004144 2026-02-14 02:00:41 0

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    1. Use quotes around phrases you want to match exactly
    2. You can manually AND and OR terms to change how we search between words
    3. You can add "-" to terms to make sure no results return with that term in them (ex. Cerebellum -CA1)
    4. You can add "+" to terms to require they be in the data
    5. Using autocomplete specifies which branch of our semantics you with to search and can help refine your search
  5. Collections

    If you are logged into nidm-terms you can add data records to your collections to create custom spreadsheets across multiple sources of data.

  6. Facets

    Here are the facets that you can filter the data by.

  7. Further Questions

    If you have any further questions please check out our FAQs Page to ask questions and see our tutorials. Click this button to view this tutorial again.