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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.
http://faculty.washington.edu/anath/
THIS RESOURCE IS NO LONGER IN SERVICE. Documented on April 15,2024. University of Washington - affiliated research lab focused on understanding the roles of protein dynamics in health and human disease. They focus on developing methods to characterize and control protein dynamics through utilizing methods like single-molecule fluorescence, computational modeling, and protein engineering. There is an emphasis on proteins involved in degenerative disorders such as Alzheimer's disease, stress responses and drug metabolism.
Proper citation: University of Washington Nath Research Group (RRID:SCR_000180) Copy
The BioCurrents Research Center (BRC) is an integrated technology resource of the NIH:NCRR. The activities of the Center focus on molecular physiology as it relates to the cell function and disease. Our particular interest is how the dynamics of cell responses are reflected in the chemical profiles of microdomains surrounding single living cells. In order to measure complex cellular boundary layers, the BRC has specialized in the development of extremely sensitive signal acquisition and processing methods along with miniaturized electrochemical sensor designs. The technique is non-invasive and termed self-referencing. Since its establishment in 1996, the BRC has directed its technological research and development to the design and application of ultra-microelectrodes (tip diameters of less than 10m) tailored for the detection of specific chemicals. These have been successfully applied to the boundary layer profiles of many different cell types, with thematic strength in diabetes research, reproductive health and development (see collaborative profiles). More recently, it is changing its focus to technical developments, enhancing the integrative approach to cell function. To understand a cell as a dynamic and integrated whole, BRC must be able to examine responses from different domains as near to real time and as synchronously as possible. To this end, it is developing imaging capabilities to work in parallel with electrochemistry and conventional electrophysiological techniques. Imaging includes a spinning disc confocal, as well as a low light/luminescent imager designed and built within the BRC. The technologies developed or under development are in high demand within the biomedical community. Over 40 investigators work with the Center each year in a collaborative or service capacity. Over 80 of our visitor pool is NIH funded, representing approximately 25 NIH divisions and institutes. As part of our training and dissemination program we host occasional workshops at major national and international meetings, train a significant number of new investigators each year and host graduate students undertaking portions of their thesis dissertation using our technologies. In dissemination we advise on, and install, electrochemical systems in off campus research endeavors, both academic and industrial.
Proper citation: BioCurrents Research Center (RRID:SCR_002020) Copy
http://www.adinstruments.com/products/software/modules/neuro_explorer.php
THIS RESOURCE IS NO LONGER IN SERVICE, documented on May 19, 2018; A provider of computer-based data acquisition and analysis systems for life science. Products enable users to record and analyze life science data quickly and efficiently. ADInstruments product range is based on the PowerLab data acquisition system with LabChart software. The PowerLab system (also MacLab) is used in universities, hospitals, research institutes, pharmaceutical companies, contract research organizations and other private industry research sectors.
Proper citation: ADInstruments - Data Acquisition Systems for Life Science (RRID:SCR_001620) Copy
http://www.immundiagnostik.com
Commercial company that develops and provides laboratory diagnostics and other medical research products.
Proper citation: Immundiagnostik (RRID:SCR_001977) Copy
http://aws.amazon.com/1000genomes/
A dataset containing the full genomic sequence of 1,700 individuals, freely available for research use. The 1000 Genomes Project is an international research effort coordinated by a consortium of 75 companies and organizations to establish the most detailed catalogue of human genetic variation. The project has grown to 200 terabytes of genomic data including DNA sequenced from more than 1,700 individuals that researchers can now access on AWS for use in disease research free of charge. The dataset containing the full genomic sequence of 1,700 individuals is now available to all via Amazon S3. The data can be found at: http://s3.amazonaws.com/1000genomes The 1000 Genomes Project aims to include the genomes of more than 2,662 individuals from 26 populations around the world, and the NIH will continue to add the remaining genome samples to the data collection this year. Public Data Sets on AWS provide a centralized repository of public data hosted on Amazon Simple Storage Service (Amazon S3). The data can be seamlessly accessed from AWS services such Amazon Elastic Compute Cloud (Amazon EC2) and Amazon Elastic MapReduce (Amazon EMR), which provide organizations with the highly scalable compute resources needed to take advantage of these large data collections. AWS is storing the public data sets at no charge to the community. Researchers pay only for the additional AWS resources they need for further processing or analysis of the data. All 200 TB of the latest 1000 Genomes Project data is available in a publicly available Amazon S3 bucket. You can access the data via simple HTTP requests, or take advantage of the AWS SDKs in languages such as Ruby, Java, Python, .NET and PHP. Researchers can use the Amazon EC2 utility computing service to dive into this data without the usual capital investment required to work with data at this scale. AWS also provides a number of orchestration and automation services to help teams make their research available to others to remix and reuse. Making the data available via a bucket in Amazon S3 also means that customers can crunch the information using Hadoop via Amazon Elastic MapReduce, and take advantage of the growing collection of tools for running bioinformatics job flows, such as CloudBurst and Crossbow.
Proper citation: 1000 Genomes Project and AWS (RRID:SCR_008801) Copy
http://www.rand.org/labor/FLS/MHSS.html
A data set of the health and socioeconomic factors that affect the elderly in Matlab, a region of rural Bangladesh. The survey captures measurements and statistics such as adult survival, health status, health care utilization, resource flows between generations and the impact of community services and infrastructure on adult health care. Data was collected through surveys that touch on four topics: household and individual information; determinants of natural fertility; migration out of the community; and community and provider survey of healthcare and education infrastructure.
Proper citation: Matlab Health and Socio-Economic Survey (RRID:SCR_008942) Copy
http://www.nitrc.org/projects/bstp/
A free collection of MRI brain images for testing segmentation algorithms. It is available for download to assess the accuracy, reproducibility and sensitivity of MRI segmentation software. It includes data from infants and adults as well as patients with Alzheimer's disease.
Proper citation: Brain Segmentation Testing Protocol (RRID:SCR_009445) Copy
https://www.k-inbre.org/pages/k-inbre_about_bio-core.html
The K-INBRE Bioinformatics Core collaborates with Kansas researchers to perform research on cell and developmental biology. Core aims to serve the needs of investigators engaged in computationally intensive biomedical research, and to promote education in bioinformatics to students and researchers across the state of Kansas.
Proper citation: Kansas State University - INBRE Bioinformatics Core Facility (RRID:SCR_012596) Copy
A national research infrastructure that provides bioinformatics support to life science researchers in Sweden. Their work is supported by the Swedish Research Council.
Proper citation: Bioinformatics Infrastructure for Life Sciences (RRID:SCR_014723) Copy
http://www.lji.org/faculty-research/scientific-cores/dlac/#overview
The department of laboratory animal care at the La Jolla Institute for Allergy and Immunology.
Proper citation: La Jolla Institute for Allergy and Immunology Department of Laboratory Animal Care (RRID:SCR_014834) Copy
http://www.lji.org/faculty-research/scientific-cores/clinical-studies/#overview
Core facility for clinical studies carried out by the La Jolla Institute of Allergy and Immunology. It is also a non-profit research organization that focuses on studying topics lthat include pollen allergies, HIV, food allergies and tuberculosis.
Proper citation: La Jolla Institute for Immunology Clinical Studies Core Facility (RRID:SCR_014833) Copy
http://www.lji.org/faculty-research/scientific-cores/functional-genomics/#overview
THIS RESOURCE IS NO LONGER IN SERVICE. Documented on July 5, 2024. Core facility that combines large-scale automation and high-throughput capabilities with gene disruption techniques to pinpoint the function of individual genes and find new ways to disrupt genetic triggers of disease. The research capabilities are aimed towards finding new treatments for immune-related diseases.
Proper citation: La Jolla Institute for Allergy and Immunology Functional Genomics Core Facility (RRID:SCR_014836) Copy
Long-term study of brain development and child health in the United States. The study tracks subjects' biological and behavioral development through adolescence into young adulthood to determine how childhood experiences (such as sports, videogames, social media, unhealthy sleep patterns, and smoking) interact with each other and with a child’s changing biology to affect brain development and social, behavioral, academic, health, and other outcomes.
Proper citation: ABCD Study (RRID:SCR_015769) Copy
http://digestivediseasescenters.org/content/ddrc-emory-university-overview
THIS RESOURCE IS NO LONGER IN SERVICE. Documented on July 5th,2023. Core facility for the Emory Epithelial Pathobiology Research Development Center.
Proper citation: Emory Epithelial Pathobiology Research Development Center Image Analysis Core (RRID:SCR_015909) Copy
https://ww2.mc.vanderbilt.edu/DDRC/41013
Core facility for the Vanderbilt Digestive Disease Research Center.
Proper citation: Vanderbilt Digestive Disease Research Center Biostatistics Administrative Core (RRID:SCR_015901) Copy
http://digestivediseasescenters.org/content/ddrc-emory-university-overview
THIS RESOURCE IS NO LONGER IN SERVICE. Documented on July 5th,2023. Core facility for the Emory Epithelial Pathobiology Research Development Center.
Proper citation: Emory Epithelial Pathobiology Research Development Center Gene Expression Analysis Core (RRID:SCR_015906) Copy
http://digestivediseasescenters.org/content/ddrc-emory-university-overview
THIS RESOURCE IS NO LONGER IN SERVICE. Documented on July 5th, 2023. Core facility for the Emory Epithelial Pathobiology Research Development Center.
Proper citation: Emory Epithelial Pathobiology Research Development Center Cell Culture Core (RRID:SCR_015904) Copy
http://www.npielectronic.de/home.html
Commercial organization that builds and supplies research-related equipment such as amplifiers.
Proper citation: NPI electronic (RRID:SCR_016002) Copy
http://digestivediseasescenters.org/content/ddrc-emory-university-overview
THIS RESOURCE IS NO LONGER IN SERVICE. Documented on July 5th, 2023. Core facility for the Emory Epithelial Pathobiology Research Development Center.
Proper citation: Emory Epithelial Pathobiology Research Development Center Cell Culture Core (RRID:SCR_015919) Copy
http://cunorc.org/cores/clinical-core/
Core facility for the University of Colorado Anschutz Medical Campus Nutrition and Obesity Research Center. Core provides NORC members assistance with clinical research studies involving modification of body weight.
Proper citation: University of Colorado Anschutz Medical Campus Nutrition and Obesity Research Center Clinical Intervention and Translation Core Facility (RRID:SCR_015912) Copy
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