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URL: https://github.com/MikkelSchubert/adapterremoval
Proper Citation: AdapterRemoval (RRID:SCR_011834)
Description: Software program to remove residual adapter sequences from next generation sequencing reads. Used for cleaning of next-generation sequencing reads. AdapterRemoval v2 introduces improvements in throughput, through use of single instruction, multiple data (SIMD; SSE1 and SSE2) instructions and multi-threading support; handles datasets containing reads or read-pairs with different adapters or adapter pairs; provides simultaneous demultiplexing and adapter trimming; has ability to reconstruct adapter sequences from paired-end reads for poorly documented data sets; provides native gzip and bzip2 support.
Synonyms: AdapterRemoval v2
Resource Type: software application, software resource, data analysis software, sequence analysis software, data processing software
Defining Citation: PMID:22748135, PMID:26868221, DOI:10.1186/s13104-016-1900-2
Keywords: cleaning of next-generation sequencing reads, remove residual adapter sequences, adapter, sequence, residual, next generation sequencing reads,
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