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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.
| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Fiber Optic Button Response System Resource Report Resource Website 10+ mentions |
Fiber Optic Button Response System (RRID:SCR_009577) | instrument resource | Instrument that accurately gathers participant responses and verifies signals. The Celeritas Series response units are assembled using high-impact, chemical resistant, medical grade plastic. The response units include a tactile indicator to ensure correct finger placement during experiments and comfortably attach to the participant?s wrists. The units communicate button presses through fiber optic cabling which connects to a Fiber Optic Interface Console located in the control room through an available wave guide. The interface console provides real-time feedback of participant responses via LED indicators and includes a set of switches which can be used to make responses for the participant as needed. | eeg, meg, electrocorticography, experiment control, hardware, magnetic resonance, response monitoring, instrument, equipment | is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) | nlx_155759 | http://www.nitrc.org/projects/fobrs https://pstnet.com/wp-content/uploads/2021/04/Celeritas-Operator-Manual.pdf |
SCR_009577 | Celeritas Fiber Optic Response System | 2026-02-14 02:01:52 | 22 | ||||||||
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Lumina LP- 400 Response System Resource Report Resource Website |
Lumina LP- 400 Response System (RRID:SCR_009596) | Lumina LP-400 | instrument resource | A reliable patient response system designed specifically for use in an fMRI. Lumina was developed to satisfy the requirements of both the clinical and research fields. | experiment control, hardware, magnetic resonance, response monitoring, fmri, clinical, research, instrument, equipment | is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) | nlx_155789 | http://www.nitrc.org/projects/lumina | http://www.cedrus.com/ordering/mri/usa.htm | SCR_009596 | Lumina fMRI Input Device, Lumina LP-400 System for fMRI, Lumina fMRI Response Pad | 2026-02-14 02:01:52 | 0 | ||||||
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Brainsight Resource Report Resource Website 50+ mentions |
Brainsight (RRID:SCR_009539) | Brainsight | software resource, resource | Neuronavigation system for use in human cognitive neuroscience (TMS, EEG, NIRS) and for non-human neurosurgical applications. | dicom, eeg, eeg, meg, electrocorticography, hardware, minc, minc2, magnetic resonance, nifti, nirs/fnir, optical imaging, optical imaging, philips par/rec, physiological recording, rendering, surface rendering, visualization, instrument, equipment | is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) | Comercial Licence | nlx_155718 | http://www.nitrc.org/projects/brainsight | SCR_009539 | 2026-02-14 02:01:51 | 62 | |||||||
|
1DegreeBio Resource Report Resource Website 10+ mentions |
1DegreeBio (RRID:SCR_011994) | software resource | A registry which provides links and reviews for material resources such as reagents, equipment, digital tools, and providers, as well as the companies that sell them. Users can search for specific materials or search by vendor, product, or service type. | registry, reagents, equipment, digital tool, marketplace, service provider, review |
is listed by: OMICtools is listed by: Connected Researchers is related to: Connected Researchers |
Free, Public | OMICS_01765 | SCR_011994 | 1degreebio, 1degreebio.org | 2026-02-14 02:02:31 | 13 | ||||||||
|
IITC Life Sciences Plantar Test Apparatus Resource Report Resource Website 1+ mentions |
IITC Life Sciences Plantar Test Apparatus (RRID:SCR_012152) | Plantar Test Apparatus | instrument resource | The IITC Plantar Analgesia Meter for thermal paw can be used on 12 mice, 6 rats and other animals (cats, rabbits) unrestrained when testing for narcotic drugs. Experiments are easy to perform, simply slide the test head under test subject, align the heat source via our exclusive guide light (idle state) by the attached, adjustable, angled mirror on test head to test subject and perform tests. | testing apparatus, hargreaves, paw radiant heat assay, toe toaster, hargreaves method, hardware, instrument, equipment | rid_000075 | https://www.iitcinc.com/pdf/Plantar%20Test%20Hargreaves.pdf | SCR_012152 | Plantar Test Apparatus for Mice and Rats, Plantar Test Apparatus (Hargreaves Method) for Mice and Rats | 2026-02-14 02:02:37 | 2 | ||||||||
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EA15: EasyView Dual Input Temperature Datalogger Resource Report Resource Website |
EA15: EasyView Dual Input Temperature Datalogger (RRID:SCR_012151) | EA15 | instrument resource | Temperature datalogger compatible with 7 types of thermocouples. This dual input thermometer accepts Types J, K, E, T, R, S, and N thermocouples. RS-232 port to transfer data to PC for analysis (PC software and cable included) | data logger, thermocouple, hardware, instrument, equipment | Commercial | rid_000074 | https://www.extech-online.com/index.php?main_page=product_info&cPath=78_21_33&products_id=209 | http://www.extech.com/instruments/product.asp?catid=64&prodid=408 | SCR_012151 | EasyView Dual Input Temperature Datalogger, EA15 thermal data logger | 2026-02-14 02:02:11 | 0 | ||||||
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G protein receptor interaction feature finding instrument Resource Report Resource Website 10+ mentions |
G protein receptor interaction feature finding instrument (RRID:SCR_008343) | production service resource, service resource, analysis service resource, resource | Griffin (G-protein-receptor interacting feature finding instrument) is a high-throughput system to predict GPCR - G-protein coupling selectively with the input of GPCR sequence and ligand molecular weight. This system consists of two parts: 1) HMM section using family specific multiple alignment of GPCRs, 2) SVM section using physico-chemical feature vectors in GPCR sequence. G-protein coupled receptors (GPCR), which is composed of seven transmembrane helices, play a role as interface of signal transduction. The external stimulation for GPCR, induce the coupling with G-protein (Gi/o, Gq/11, Gs, G12/13) followed by different kinds of signal transduction to inner cell. About half of distributed drugs are intending to control this GPCR - G-protein binding system, and therefore this system is important research target for the development of effective drug. For this purpose, it is necessary to monitor, effectively and comprehensively, of the activation of G-protein by identifying ligand combined with GPCR. Since, at present, it is difficult to construct such biochemical experiment system, if the answers for experimental results can be prepared beforehand by using bioinformatics techniques, large progress is brought to G-protein related drug design. Previous works for predicting GPCR-G protein coupling selectivity are using sequence pattern search, statistical models, and HMM representations showed high sensitivity of predictions. However, there are still no works that can predict with both high sensitivity and specificity. In this work we extracted comprehensively the physico-chemical parameters of each part of ligand, GPCR and G-protein, and choose the parameters which have strong correlation with the coupling selectivity of G-protein. These parameters were put as a feature vector, used for GPCR classification based on SVM. | drug, alignment, biochemical, bioinformatic, coupling, gpcr, g-protein, helix, instrument, interface, ligand, molecular, pattern, physico-chemical, receptor interacting, sequence, signal transduction, stimulation, svm, system, technique, transmembrane, weight, instrument, equipment, hardware, bio.tools |
is listed by: bio.tools is listed by: Debian has parent organization: Computational Biology Research Center Core Facility |
National Institute of Advanced Industrial Science and Technology | nif-0000-25210, biotools:griffin | https://bio.tools/griffin | SCR_008343 | Griffin | 2026-02-14 02:01:37 | 19 | |||||||
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OEI fMRI compatible olfactometer Resource Report Resource Website 1+ mentions |
OEI fMRI compatible olfactometer (RRID:SCR_002507) | OEI fMRI compatible olfactometer | instrument resource | A computerized, odor delivery device that can be used for basic research applications including mapping olfactory centers, cognitive / learning research, neuro-marketing among other uses. Additional products including tests for odor threshold, odor identification, odor discrimination and odor memory. | experiment control, hardware, magnetic resonance, stimulus presentation, odor, olfactory, instrument, equipment | is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) | Commercial License | nlx_155907 | http://www.nitrc.org/projects/oei http://www.osmicenterprises.com/docs/OsmicFMRIOlfactomterManual%207-1-13.pdf |
SCR_002507 | 2026-02-14 02:00:26 | 4 | |||||||
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Primate Resource Referral Service Resource Report Resource Website 1+ mentions |
Primate Resource Referral Service (RRID:SCR_002828) | PRRS | data or information resource, material service resource, production service resource, service resource, database | It provides the communications/database network needed for efficient acquisition and sharing of existing captive primates and primate-related resources by investigators and institutions both nationally and internationally. The overall goal of this service is to maximize the use of existing captive primates, thereby reducing the total number of primates needed for research, and in turn, helping to promote the conservation of primate populations in the wild. Services Provided PRRS services include 1) Referral Service, an immediate, staff-operated service designed to match investigator inquiries/requests to the available resource listings maintained in the PRRS master database; 2) CURRENT LISTINGS, a twice-monthly newsletter listing current availability of, as well as needs for, primates, tissues, equipment, and services; 3) ANNUAL RESOURCE GUIDE (ARG), an annual publication that lists subscribing suppliers of primates, laboratories, equipment, and commercial services such as transportation and quarantine facilities; and 4) Web site, an interactive site that includes the full text of CURRENT LISTINGS as well as online forms for posting resource availabilities/needs and listing updates, the current ARG, a diagram of primate taxonomy with illustrative photographs, online renewal and feedback forms, general service information, and links to other sites of interest to the primate research community. The PRRS also maintains a database of colonies, primates, and primate materials to which notices of availability and need can be referred. Services are available without charge to government-supported researchers and other scientists in the United States and abroad using primates in their work. Sponsors: The PRRS is made possible by grant RR-01240 from the National Center for Research Resources, National Institutes of Health. | equipment, colony, communication, institution, investigator, network, primate, research, tissue | has parent organization: University of Washington; Seattle; USA | Free | nif-0000-24969 | http://www.wanprc.org/prrs/ | SCR_002828 | Primate Resource Referral Service | 2026-02-14 02:00:33 | 3 | ||||||
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International Institute of Molecular and Cell Biology; Warsaw; Poland Resource Report Resource Website 1+ mentions |
International Institute of Molecular and Cell Biology; Warsaw; Poland (RRID:SCR_000971) | IIMCB | institution | International Institute of Molecular and Cell Biology creates partnerships with research centers within and outside Poland. This organization provides a base of administration, management of finances and resources, sharing space and equipment, grant writing and grant management procedures, etc. They organize workshops, training courses, conferences and other scientific events for researchers of various specialties and nationalities. Additionally, this organization commercializes results to provide biotechnological solutions with regards to the global economy and global research services deals. | poland, warsaw, institution, administration, management, equipment, grant writing, grant management, commercial, biotechnology, global economy, global research, research center, partnership |
is parent organization of: MetaLocGramN is parent organization of: Modomics |
nlx_156957, grid.419362.b | https://ror.org/01y3dkx74 | SCR_000971 | International Institute of Molecular and Cell Biology, International Institute of Molecular and Cell Biology (IIMCB) | 2026-02-14 01:59:52 | 1 | |||||||
|
Model 1025 MR-compatible Small Animal Monitoring and Gating System Resource Report Resource Website 1+ mentions |
Model 1025 MR-compatible Small Animal Monitoring and Gating System (RRID:SCR_002090) | Model 1025 Monitoring & Gating System | instrument resource | Magnetic resonance compatible monitoring and gating system, including software, that enables monitoring rectal temperature, electrocardiogram and respiration rate during magnetic resonance imaging scan time. The PC displays multiple waveforms, measured values, trends and gating pulses. The data Acquisition modules are controlled by menu driven software from the PC. Data acquisition modules are available to measure the following parameters: ECG, respiration (three ways), temperature (two ways), pressure including invasive blood pressure (two ways), oxygen saturation and end-tidal CO2. | hardware, instrument, equipment, physiology, monitoring, gating, mr environment, respiration, temperature, blood pressure, oxygen saturation, end-tidal co2, magnetic resonance, electrocardiogram, magnetic resonance imaging, software resource | Free, Freely available | SciRes_000157 | https://wikihost.uib.no/mriwiki/images/4/4c/SAInstruments_1025.pdf | http://www.i4sa.com/web_app/main/defaultProduct.aspx?ID=82&PT=3 | SCR_002090 | Model 1025 Monitoring and Gating System, MR-Compatible Model 1025 Monitoring and Gating System, Small Animal Monitoring and Gating System | 2026-02-14 02:00:22 | 3 | ||||||
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Leica TCS SPE Resource Report Resource Website 10+ mentions |
Leica TCS SPE (RRID:SCR_002140) | TCS SPE | instrument resource | High resolution, compact and robust confocal that enables immunohistochemical colocalization analysis of florescent markers. Leica TCS SPE confocal point-scanning, spectral system for fluorescence imaging of live or fixed cells. | confocal microscope, imaging, instrument, equipment, hardware | has parent organization: Leica Microsystems | Restricted | SciRes_000154 | http://www.leica-microsystems.com/fileadmin/downloads/Leica%20TCS%20SPE/Brochures/Leica%20TCS%20SPE-Brochure_EN.pdf | SCR_002140 | Leica TCS SPE confocal microscope | 2026-02-14 02:00:22 | 32 | ||||||
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BD LSR II Flow Cytometer Resource Report Resource Website 10+ mentions |
BD LSR II Flow Cytometer (RRID:SCR_002159) | LSR II Flow Cytometer | instrument resource | Benchtop high-performance cell sorter with multiple lazer, detector and fluoroscrome options. Allows detection of 12 parameters (10 color conjugates, forward and sideward scatter). | flow cytometer, instrument, equipment, hardware | has parent organization: BD Biosciences | THIS RESOURCE IS NO LONGER IN SERVICE | Model_Number_BD LSR II, SciRes_000152 | https://fccf.sitehost.iu.edu/pdf/BDLSRIIUserGuide.pdf | http://www.rockefeller.edu/fcrc/pdf/BD_LSRII_Brochure_SJ-0142-00.pdf | SCR_002159 | 2026-02-14 02:00:19 | 35 | ||||||
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COGNISION Resource Report Resource Website 1+ mentions |
COGNISION (RRID:SCR_002362) | COGNISION | software resource | A portable, highly integrated, internet-enabled, hardware / software platform and patient management system, which includes an online Patient Manager module which complies with the HIPAA Final Security Rule, an event-related potential (ERP) Viewer module to view and analyze raw and average ERP waves, and a Protocol Editor module to simplify the choice and administration of selected ERP protocols. It is also easy to train and administer with non-specialized personnel, and is designed to be used in an out-patient setting. COGNISION TM with auditory or visual event-related potential (ERP) technology, provides a direct physiologic measure of patients' cognitive processing (i.e., a cognitive biomarker). | eeg, eeg, meg, electrocorticography, event-related potentials, hardware, physiological recording, instrument, equipment | is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) | Commercial License | nlx_155724 | http://www.nitrc.org/projects/neuronetrix | SCR_002362 | COGNISION (TM) System | 2026-02-14 02:00:23 | 2 | ||||||
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Mount Sinai School of Medicine: In-Vivo Molecular Imaging Laboratory Resource Report Resource Website |
Mount Sinai School of Medicine: In-Vivo Molecular Imaging Laboratory (RRID:SCR_001785) | analysis service resource, material analysis service, production service resource, biomaterial analysis service, service resource, data computation service | The In-Vivo Molecular Imaging Laboratory (IMIL) is a MSSM shared resource facility serving the research community of Mount Sinai with equipment and imaging expertise. State-of-the-art bioluminescent as well as fluorescent imaging modalities are supported for in-vivo monitoring of cellular and genetic activity. Investigators are provided with cutting edge imaging technologies as well as analysis techniques. The long-term goal is to establish a comprehensive SRF for in-vivo molecular imaging using micro-MRI, micro-PET and other modalities. IMIL houses a Xenogen IVIS-200 Series imaging system with the integrated fluorescent imaging options. Simultaneous dual reporter in-vivo imaging is possible with bioluminescence and fluorescence probes. The imaging chamber has a gas anesthesia manifold that can accommodate up to 5 mice for simultaneously image acquisition. Selectable field of views allow in-plane (X,Y) imaging resolutions of up to 60-microm. Integrated spectra filters allow for the determination of signal source depth (Z). IMIL will provide data acquisition services as well as analysis. IMIL has a dedicated imaging technologist for data acquisition. Investigators will bring their prepared animal to the lab and an IMIL imaging technologist will assist in sedating the animals and acquire imaging data. Typical imaging sessions last about an hour. Certified users who are trained in the use of the software will be able to perform their own analysis at the console. Usage of the imaging device is charged by the hour ($100/hour). Structural Imaging The IVIS-200 has the built-in capability of obtaining an image of the surface topography of the animal for 2D and 3D localization. If additional true 3D imaging data is required, micro MRI is available through the Imaging Science Laboratories (ISL). Image Analysis The IVIS-200 has an integrated image acquisition and analysis software (Living Image Software 2.50). Comprehensive data quantification is possible with this software. Raw data as well as analyzed results can be electronically transferred to the investigators. Support is also available for additional image analysis such as intermodality coregistration, 3D rendering, and group statistics. Additional software packages include MedX, SPM, Brainvoyager, Analyze, and in-house developed software. | equipment, fluorescence, fluorescent, genetic, 2d, 3d, analysis, bioluminescence, bioluminescent, cellular, imaging, intermodality coregistration, in-vivo, localization, mice, micro-mri, micro-pet, molecular, probe, software, spectra, technology, xenogen ivis-200 series | has parent organization: Icahn School of Medicine at Mount Sinai; New York; USA | Free, Freely available | nif-0000-10299 | http://www.mssm.edu/research/resources/molecular_imaging/ | SCR_001785 | MSSM IMIL | 2026-02-14 02:00:07 | 0 | |||||||
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Leica DMRE Fluorescence Microscope Resource Report Resource Website 1+ mentions |
Leica DMRE Fluorescence Microscope (RRID:SCR_000011) | Leica DMRE microscope | instrument resource | THIS RESOURCE IS NO LONGER IN SERVICE. Documented on July 31,2025. Microscope that enables bright field and fluorescence imaging options. | microscope, fluorescence, imaging, hardware, instrument, equipment, USEDit | has parent organization: Leica Microsystems | THIS RESOURCE IS NO LONGER IN SERVICE | SciRes_000155 | SCR_000011 | Fluorescence Leica DMRE microscope | 2026-02-14 01:59:35 | 9 | |||||||
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Nikon Eclipse FN1 Microscope Resource Report Resource Website 1+ mentions |
Nikon Eclipse FN1 Microscope (RRID:SCR_014995) | instrument resource | Fixed-stage microscope for electrophysiological research. Features include open design, noise reduction, 16x objective lens, and water dipping objective with depth induced aberration correction. | microscope, electrophysiology, fixed-stage, nikon, hardware, instrument, equipment, USEDit | is listed by: USEDit | Commercially available, Available for purchase | https://downloads.microscope.healthcare.nikon.com/phase4/literature/Brochures/Fn1-2CE-MRQH-8.pdf | SCR_014995 | Eclipse FN1 | 2026-02-14 02:02:47 | 7 | ||||||||
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2200 TapeStation Instrument Resource Report Resource Website 10+ mentions |
2200 TapeStation Instrument (RRID:SCR_014994) | instrument resource | Hardware system which automates RNA, DNA, and protein sample QC, including sample loading, separation, and imaging. | rna, dna, protein sample qc, quality control, agilent, hardware, instrument, equipment, USEDit | https://www.agilent.com/cs/library/usermanuals/public/G2964-90000_TapeStation_USR_ENU.pdf | http://www.genomics.agilent.com/en/TapeStation-System/2200-TapeStation-Instrument/?cid=AG-PT-181&tabId=AG-PR-1004 | SCR_014994 | Agilent 2200 TapeStation, Agilent 2200 TapeStation system | 2026-02-14 02:03:00 | 17 | |||||||||
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Applied Biosystems 3730xl Capillary Genetic Sequencer Resource Report Resource Website 1+ mentions |
Applied Biosystems 3730xl Capillary Genetic Sequencer (RRID:SCR_018059) | instrument resource | 96-capillary DNA analyzer that performs DNA fragment analysis applications such as microsatellites, AFLP, SNP analysis, mutation detection and traditional DNA sequencing. Has multiple automation features. Performs sequencing and fragment analysis applications including resequencing, microsatellite analysis, AFLP, LOH, SSCP, SNP screening and SNP validation. | ABRF, capillary sequencer, 96-capillary DNA analyzer, high throughput genetic analysis, DNA fragment analysis, microsatellites, AFLP, SNP analysis, mutation detection, DNA sequencing, instrument, equipment | is listed by: USEDit | Model_Number_3730xl | SCR_018059 | Applied Biosystems 3730xl Capillary Sequencer | 2026-02-14 02:03:30 | 2 | |||||||||
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Bio-Rad CFX96 Real-Time PCR Detection System Resource Report Resource Website 50+ mentions |
Bio-Rad CFX96 Real-Time PCR Detection System (RRID:SCR_018064) | instrument resource | Real Time PCR detection system that combines optical technology with temperature control. Six channel, five colors and one FRET channel, real-time PCR instrument for singlexplex or multiplex reactions. Quickly set up runs and monitor amplification traces in real time on integrated LCD touch screen, or use included CFX Maestro Software to design experiment and analyze results from connected computer. | ABRF, Real-Time Instrument, RT PCR, equipment, Bio Rad | is listed by: USEDit | Model_Number_CFX96 | https://www.bio-rad.com/webroot/web/pdf/lsr/literature/10010424.pdf | SCR_018064 | CFX96 Real Time PCR | 2026-02-14 02:03:26 | 80 |
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