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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.

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Resource Name Proper Citation Abbreviations Resource Type Description Keywords Resource Relationships Related Condition Funding Defining Citation Availability Website Status Alternate IDs Alternate URLs Old URLs Parent Organization Resource ID Synonyms Record Last Update Mentions Count
Ontology of General Purpose Datatypes
 
Resource Report
Resource Website
Ontology of General Purpose Datatypes (RRID:SCR_010397) ONTODT data or information resource, ontology, controlled vocabulary Ontology that contains entities such as: datatype, datatype generator, datatype quality and others giving the possibility to represent arbitrary complex datatypes. This is an important fact for a general data mining ontology that wants to represent and query over modelling algorithms for mining structured data. The ontology was first developed under the OntoDM (Ontology of Data Mining, http://kt.ijs.si/panovp/OntoDM) ontology, but for generality and reuse purpose it was decided to export it as a separate ontology. Additionaly, the OntoDT ontology is based on and ISO/IEC 11404 (http://www.iso.org/iso/catalogue_detail.htm?csnumber=39479) standard and can be reused used independently by any domain ontology that requires representation and reasoning about general purpose datatypes. owl is listed by: BioPortal nlx_157529 SCR_010397 2026-02-14 02:01:45 0
Ontology of Alternative Medicine French
 
Resource Report
Resource Website
Ontology of Alternative Medicine French (RRID:SCR_010390) ONTOMA data or information resource, ontology, controlled vocabulary Ontology for common concepts for communication between traditional medicine and western medicine. (In French) owl is listed by: BioPortal nlx_157523 SCR_010390 Ontology of Alternative Medicine - French 2026-02-14 02:01:58 0
Ontology of Glucose Metabolism Disorder
 
Resource Report
Resource Website
Ontology of Glucose Metabolism Disorder (RRID:SCR_010399) OGMD data or information resource, ontology, controlled vocabulary Ontology including the disease names, phenotypes and their classifications involved in Glucose Metabolism Disorder, Diabetes. (OBO and OWL format are available in sourceforge.) obo, owl is listed by: BioPortal Glucose Metabolism Disorder nlx_157531 SCR_010399 2026-02-14 02:01:59 0
Tick Gross Anatomy Ontology
 
Resource Report
Resource Website
Tick Gross Anatomy Ontology (RRID:SCR_010433) TADS data or information resource, ontology, controlled vocabulary Anatomy Ontology of the Tick, Families: Ixodidae, Argassidae obo is listed by: BioPortal nlx_157609 SCR_010433 2026-02-14 02:01:59 0
Traditional Medicine Constitution Value Set
 
Resource Report
Resource Website
Traditional Medicine Constitution Value Set (RRID:SCR_010435) TM-CONST data or information resource, ontology, controlled vocabulary Ontology of the value set for the constitution property of the International Classification of Traditional Medicine (ICTM). owl is listed by: BioPortal nlx_157612 SCR_010435 2026-02-14 02:01:59 0
Traditional Medicine Signs and Symptoms Value Set
 
Resource Report
Resource Website
Traditional Medicine Signs and Symptoms Value Set (RRID:SCR_010438) TM-SIGNS-AND-SYMPTS data or information resource, ontology, controlled vocabulary Ontology of the value set for the Signs and Symptoms property of the International Classification of Traditional Medicine (ICTM). owl is listed by: BioPortal nlx_157615 SCR_010438 2026-02-14 02:01:58 0
Units Ontology
 
Resource Report
Resource Website
Units Ontology (RRID:SCR_010441) UNITSONT data or information resource, ontology, controlled vocabulary A small ontology for the units of measurement developed during the development of the Sleep Domain Ontology (SDO). It supports the use of SDO within the PhysioMIMI application. owl is listed by: BioPortal nlx_157618 SCR_010441 2026-02-14 02:01:59 0
Units of Measurement Ontology
 
Resource Report
Resource Website
1+ mentions
Units of Measurement Ontology (RRID:SCR_010442) UO data or information resource, ontology, controlled vocabulary Metrical units ontology for use in conjunction with PATO obo is listed by: BioPortal nlx_157619 SCR_010442 2026-02-14 02:01:46 1
NIF Subcellular Ontology
 
Resource Report
Resource Website
NIF Subcellular Ontology (RRID:SCR_010366) NIFSUBCELL data or information resource, ontology, controlled vocabulary Ontology that contains cell parts and subcellular structures from SAO-CORE and Gene Ontology Cellular Component (GO-CC). http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Subcellular.owl owl is listed by: BioPortal
has parent organization: Neuroscience Information Framework
nlx_157494 SCR_010366 Neuroscience Information Framework Subcellular Ontology, Neuroscience Information Framework (NIF) Subcellular Ontology 2026-02-14 02:01:58 0
NMR-Instrument Component of Metabolomics Investigations Ontology
 
Resource Report
Resource Website
1+ mentions
NMR-Instrument Component of Metabolomics Investigations Ontology (RRID:SCR_010367) NMR data or information resource, ontology, controlled vocabulary Metabolomics Standards Initiative-sanctioned ontology, created within the COSMOS EU project, to support the nmrML data standard for nuclear magnetic resonance data in metabolomics with meaningful raw data descriptors. owl, nuclear magnetic resonance, metabolomics is listed by: BioPortal
is related to: Metabolomics Standards Initiative
has parent organization: nmrCV
nlx_157495 SCR_010367 2026-02-14 02:01:58 1
Ontology of Homology and Related Concepts in Biology
 
Resource Report
Resource Website
1+ mentions
Ontology of Homology and Related Concepts in Biology (RRID:SCR_010400) HOM data or information resource, ontology, controlled vocabulary Ontology that represents concepts related to homology, as well as other concepts used to describe similarity and non-homology. obo is listed by: BioPortal nlx_157532 SCR_010400 2026-02-14 02:01:59 1
Name Reaction Ontology
 
Resource Report
Resource Website
Name Reaction Ontology (RRID:SCR_010368) RXNO data or information resource, ontology, controlled vocabulary Ontology that connects organic name reactions such as the Diels-Alder cyclization and the Cannizzaro reaction to their roles in an organic synthesis. obo is listed by: BioPortal nlx_157496 https://code.google.com/p/rxno/ SCR_010368 2026-02-14 02:01:45 0
Ontology of Language Disorder in Autism
 
Resource Report
Resource Website
Ontology of Language Disorder in Autism (RRID:SCR_010401) LDA data or information resource, ontology, controlled vocabulary Ontology of language terms used in the domain of autism available for consultation and sharing. The language terms were obtained via text mining and automatic retrieval of terms from the corpus of PubMed abstracts. owl is listed by: BioPortal Autism, Language disorder nlx_157533 SCR_010401 Ontology of Language Disorder in Autism 2026-02-14 02:01:45 0
Pathogenic Disease Ontology
 
Resource Report
Resource Website
Pathogenic Disease Ontology (RRID:SCR_010405) PDO data or information resource, ontology, controlled vocabulary An ontology for describing both human infectious disease caused by bacteria and the disease that is related to bacterial infection. owl is listed by: BioPortal Infectious disease, (caused by bacteria), Bacterial infection related disease nlx_157543 SCR_010405 2026-02-14 02:01:57 0
National Drug Data File
 
Resource Report
Resource Website
National Drug Data File (RRID:SCR_010371) NDDF data or information resource, ontology, controlled vocabulary Ontology of the National Drug Data File plus source vocabulary umls is listed by: BioPortal nlx_157499 SCR_010371 2026-02-14 02:01:58 0
Neglected Tropical Disease Ontology
 
Resource Report
Resource Website
Neglected Tropical Disease Ontology (RRID:SCR_010374) NTDO data or information resource, ontology, controlled vocabulary Ontology that aims at representing classes and relations to a specific set of diseases which persist in exactly the physical, psychosocial and economic situation of the poorest, most marginalized populations of the developing world, the Neglected Tropical Diseases (NTD). The current focus of NTDO is related to the transmission of vector-borne diseases and how they are related to the death. NTDO is based on BioTop (main classes and relations) and GFO (Time Representation) and represented in Description Logics (DL). NTDO includes information about the proper disease, its causative agent (when available), dispositions, and the geographic location the disease happens. In addition, NTDO includes a generic attempt to identify the process which leads a person to death, due to NTDs or other diseases. NTDO was built with a rich set of axioms and the intended usage is related to Health Surveillance of NTD-related morbidity and mortality cases. owl is listed by: BioPortal Tropical disease, Vector-borne disease nlx_157502 http://www.cin.ufpe.br/~ntdo SCR_010374 2026-02-14 02:01:57 0
Neomark Oral Cancer Ontology version 3
 
Resource Report
Resource Website
Neomark Oral Cancer Ontology version 3 (RRID:SCR_010375) NEOMARK3 data or information resource, ontology, controlled vocabulary Ontology that describes the medical information necessary for early detection of the oral cancer reoccurrence extracted from the NeoMark Project. owl is listed by: BioPortal Oral cancer nlx_157503 SCR_010375 2026-02-14 02:01:58 0
Neomark Oral Cancer Ontology version 4
 
Resource Report
Resource Website
Neomark Oral Cancer Ontology version 4 (RRID:SCR_010376) NEOMARK4 data or information resource, ontology, controlled vocabulary Ontology that describes the medical information necessary for early detection of the oral cancer reoccurrence extracted from the NeoMark Project. owl is listed by: BioPortal Oral cancer nlx_157504 SCR_010376 2026-02-14 02:01:58 0
Neural Motor Recovery Ontology
 
Resource Report
Resource Website
Neural Motor Recovery Ontology (RRID:SCR_010377) NEUMORE data or information resource, ontology, controlled vocabulary Ontology of neural functional motor recovery. owl is listed by: BioPortal nlx_157505 SCR_010377 2026-02-14 02:01:45 0
NeuroMorpho.Org species ontology
 
Resource Report
Resource Website
NeuroMorpho.Org species ontology (RRID:SCR_010378) NMOSP data or information resource, ontology, controlled vocabulary Species ontology that adopts and integrates relevant portions of available taxonomies as needed based on the species and strain terms represented in the current release of NeuroMorpho.Org (72 terms as of the 5.7 release) and any future additions. When a NeuroMorpho.Org term is mapped with an external resource, its entire lineage (ancestors and descendants) is added to the NeuroMorpho.Org species ontology. The resulting 1,340 terms of this initial version of the ontology come for 65% from the NCBI taxonomy (24 NeuroMorpho.Org species/strain terms mapped), 30% from the Rat Gene Database (1 term mapped), and altogether 5% from NIFSTD (7 terms mapped), MeSH (2 terms mapped), ITIS (1 term mapped), and custom-added concepts (41 terms mapped, largely mouse strains from Jackson Labs). obo is listed by: BioPortal
has parent organization: NeuroMorpho.Org
nlx_157508 SCR_010378 2026-02-14 02:01:57 0

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