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URL: https://github.com/aplbrain/saber
Proper Citation: Scalable Analytics for Brain Exploration Research (RRID:SCR_018812)
Description: Library of containerized tools and workflow deployment system for enabling processing of large neuroimaging datasets. Provides canonical neuroimaging workflows specified in standard workflow language (CWL), integration with workflow execution engine (Airflow), imaging database (bossDB), and parameter database (Datajoint) to deploy workflows at scale, and tools to automate deployment and optimization of neuroimaging pipelines.
Abbreviations: SABER, saber
Resource Type: software toolkit, workflow software, software resource, software application, data processing software, software library
Defining Citation: DOI:10.1101/615161v1.full
Keywords: Running containerized workflow, large neuroimaging datasets, canonical neuroimaging workflow, neuroimaging pipeline deployment, neuroimaging pipeline optimization
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