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Integrated Animals is a virtual database currently indexing available animal strains and mutants from: AGSC (Ambystoma), BCBC (mice), BDSC (flies), European Xenopus Resource Center (frog), The National Xenopus Resource (frog), Xenopus Express (frog), CWRU Cystic Fibrosis Mouse Models (mice), DGGR (flies), FlyBase (flies), IMSR (mice), MGI (mice), MMRRC (mice), NSRRC (pig), RGD (rats), Sperm Stem Cell Libraries for Biological Research (rats), Tetrahymena Stock Center (Tetrahymena), WormBase (worms), XGSC (Xiphophorus), ZFIN (zebrafish), and ZIRC (zebrafish). Note, the IMSR data is linked, but users may need to re-execute the search if the top mouse is not returned properly.
Note: BCBC is no longer in service, so the links may not be functional.
| Organism Name | Proper Citation | Species | Synonyms |
Notes |
Phenotype | Affected Gene | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
ACI.BN-(Fer1l6rgdv775925951-C-D7Uwm28)/Shul Resource Report Resource Website |
RRID:RGD_13210774 | Rattus norvegicus | This congenic strain contains a region of BN/SsNHsd chromosome 7 transferred to the ACI/SegHsd strain background. | 13210774 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 13210774 | 2026-02-14 03:50:06 | 0 | |||||
|
WKY.Cg-clest/Iet Resource Report Resource Website |
RRID:RGD_13464327 | Rattus norvegicus | When the depositor (The Institute of Environmental Toxicology ) conducted mating experiment using male Crl:CD(SD) rats, the offsprings of backcrossed-generation showed multiple malformations such as ectrodactylism, cleft palate or lip in 2013. These phenotype might be inherited in an autosomal recessive pattern. Therefore the congenic strain was established using WKY strain as the recipient strain. National BioResource Project for the Rat in Japan | 13464327 | congenic | Rat Genome Database (RGD) | RGD | Cryopreserved Sperm (as of 2018-01-03) | 13464327 | 2026-02-14 03:50:06 | 0 | |||||
|
SS.SHR-(D2Rat127- D2Rat230)/Mco Resource Report Resource Website |
RRID:RGD_150517550 | Rattus norvegicus | This SS congenic carries the chromosomal fragment from the spontaneously hypertensive rat (SHR). Recombinant Progeny Testing (RPT) was used to fine-map the proteinuria locus. The congenic was developed from the recombinant families by fixing the transferred genomic interval (D2Rat127- D2Rat230) in the homozygous SHR/SHR state | 150517550 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 150517550 | 2026-02-14 03:50:08 | 0 | |||||
|
F344.Cg-Foxn1rnu-/+/Jcl Resource Report Resource Website |
RRID:RGD_126790472 | Rattus norvegicus | This congenic strain was established as a strain with the genetic background of F344/N onto which a segment from the nude rat containing the Foxn1rnu was transferred. Originally, hairless mutant (rnu) was observed in a colony of outbred hooded rats maintained at the Rowett Research Institute in Scotland. Backcrossing started at Central Institute for Experimental Animals in 1979 and thereafter the subline was transported to CLEA Japan, Inc for production and supply of these rats. CLEA Japan, Inc | 126790472 | congenic | Rat Genome Database (RGD) | RGD | Live Animals (as of 2021-04-22) | 126790472 | 2026-02-14 03:50:08 | 0 | |||||
|
ACI.FHH-(rgdv393055223-rs107095981)/Mcwi Resource Report Resource Website |
RRID:RGD_14975244 | Rattus norvegicus | This congenic line was produced by backcrossing ACI.FHH-[D1Rat74-D1Rat90] ((also named Rf-1A, RGD:5143940) congenic rats to ACI rats to initiate the generation of Rf-1 congenic sublines. Offspring that had inherited a desirable recombination within the Rf-1 region were selected. These selected offspring were backcrossed and intercrossed to produce homozygous congenic sublines used for phenotyping. | 14975244 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 14975244 | 2026-02-14 03:50:08 | 0 | |||||
|
ACI.FHH-(rs105487995-rs106411696)/Mcwi Resource Report Resource Website |
RRID:RGD_14975243 | Rattus norvegicus | This congenic line was produced by backcrossing ACI.FHH-[D1Rat74-D1Rat90] (also named Rf-1A, RGD:5143940) congenic rats to ACI rats to initiate the generation of Rf-1 congenic sublines. Offspring that had inherited a desirable recombination within the Rf-1 region were selected. These selected offspring were backcrossed and intercrossed to produce homozygous congenic sublines used for phenotyping. | 14975243 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 14975243 | 2026-02-14 03:50:08 | 0 | |||||
|
ACI.FHH-(rgdv393055223-rs198076037)/Mcwi Resource Report Resource Website |
RRID:RGD_14975246 | Rattus norvegicus | This congenic line was produced by backcrossing ACI.FHH-[D1Rat74-D1Rat90] (also named Rf-1A, RGD:5143940) congenic rats to ACI rats to initiate the generation of Rf-1 congenic sublines. Offspring that had inherited a desirable recombination within the Rf-1 region were selected. These selected offspring were backcrossed and intercrossed to produce homozygous congenic sublines used for phenotyping. | 14975246 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 14975246 | 2026-02-14 03:50:08 | 0 | |||||
|
ACI.FHH-(rs105373896-rgdv253272372)/Mcwi Resource Report Resource Website |
RRID:RGD_14975247 | Rattus norvegicus | This congenic line was produced by backcrossing ACI.FHH-[D1Rat74-D1Rat90] (also named Rf-1A, RGD:5143940) congenic rats to ACI rats to initiate the generation of Rf-1 congenic sublines. Offspring that had inherited a desirable recombination within the Rf-1 region were selected. These selected offspring were backcrossed and intercrossed to produce homozygous congenic sublines used for phenotyping. | 14975247 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 14975247 | 2026-02-14 03:50:08 | 0 | |||||
|
RCS-Mertkrdy+p/LavJcl Resource Report Resource Website |
RRID:RGD_126848776 | Rattus norvegicus | This strain maintained at Japan JCLEA is homozygous at the pink eye (p) locus and homozygous for wild type Mertk gene. CLEA Japan, Inc | 126848776 | congenic | Rat Genome Database (RGD) | RGD | Live Animals (as of 2021-04-30) | 126848776 | 2026-02-14 03:50:08 | 0 | |||||
|
MWF.SHR-(D6Rat1-D6Rat106)/Rkb Resource Report Resource Website |
RRID:RGD_150429602 | Rattus norvegicus | The congenic MWF.SHR-(D6Rat1-D6Rat106)/Rkb was generated by transfer of different nested SHR/FubRkb segments onto the MWF/FubRkb background. For this procedure, male and female rats of the MWF-6SHR (RGD:1641831) breeding, that were homozygous for all MWF chromosomes except RNO6 and heterozygous for RNO6, were intercrossed. Eight congenics were generated. | 150429602 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 150429602 | 2026-02-14 03:50:08 | 0 | |||||
|
MWF.SHR-(D6Rat1-D6Rat30)/Rkb Resource Report Resource Website |
RRID:RGD_150429601 | Rattus norvegicus | The congenic MWF.SHR-(D6Rat1-D6Rat30)/Rkb was generated by transfer of different nested SHR/FubRkb segments onto the MWF/FubRkb background. For this procedure, male and female rats of the MWF-6SHR (RGD:1641831) breeding, that were homozygous for all MWF chromosomes except RNO6 and heterozygous for RNO6, were intercrossed. Eight congenics were generated. | 150429601 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 150429601 | 2026-02-14 03:50:08 | 0 | |||||
|
MWF.SHR-(D6Rat1-D6Rat184)/Rkb Resource Report Resource Website |
RRID:RGD_150429608 | Rattus norvegicus | The congenic MWF.SHR-(D6Rat1-D6Rat184)/Rkb was generated by transfer of different nested SHR/FubRkb segments onto the MWF/FubRkb background. For this procedure, male and female rats of the MWF-6SHR (RGD:1641831) breeding, that were homozygous for all MWF chromosomes except RNO6 and heterozygous for RNO6, were intercrossed. Eight congenics were generated. | 150429608 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 150429608 | 2026-02-14 03:50:08 | 0 | |||||
|
WBN-Ht/Kob Resource Report Resource Website |
RRID:RGD_150520049 | Rattus norvegicus | The hairless rat was orginially found in JCL:Wistar rats at Ishikawa Laboratory Animal company, Saitama, Japan. Thereafter, hairless rats were backcrossed with WBN rats for 8 generations and the congenic strain of hairless rats has been established with a background of WBN at the company. | 150520049 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 150520049 | 2026-02-14 03:50:09 | 0 | |||||
|
F344.LEA-Idao/Okt Resource Report Resource Website |
RRID:RGD_149735559 | Rattus norvegicus | A congenic strain in which the Idao locus of LEA/Tohm rats was introduced into F344/NSlc rats. "This strain is homozygous for the Idao locus, which contains a 54.1 kb deletion in the Dao gene. National BioResource Project for the Rat in Japan | 149735559 | congenic | Rat Genome Database (RGD) | RGD | Cryopreserved Sperm (as of 2021-07-22) | 149735559 | 2026-02-14 03:50:09 | 0 | |||||
|
SS.BN-(D13Hmgc41-D13Rat101)/Mcwi Resource Report Resource Website |
RRID:RGD_30309956 | Rattus norvegicus | These were generated by crossing SS/JrHsdMcwi with SS-Chr 13BN/Mcwi, rats from F1 were intercrossed and genotyped to get the congenic strain. | 30309956 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 30309956 | 2026-02-14 03:50:09 | 0 | |||||
|
SS.LEW-(D10Mco30-D10Got92)/Ayd Resource Report Resource Website |
RRID:RGD_1579914 | Rattus norvegicus | A sub congenic strain derived from the progenitor strain SS.LEW-(D10Rat27-Igfbp4)/Ayd. | 1579914 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 1579914 | 2026-02-14 03:49:44 | 0 | |||||
|
F344.GK-(D1Rat83-D1Rat376)/Swe Resource Report Resource Website |
RRID:RGD_1600345 | Rattus norvegicus | This is a congenic substrain derived by intercrossing female F344/Crl and male F344.GK-(D1Arb42a-D1Rat90)/Swe. F2 progeny carried the homozygous GK/Swe genome in different segments. These were then maintained by bxs breeding. | 1600345 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 1600345 | 2026-02-14 03:49:44 | 0 | |||||
|
F344.GK-(D1Swe4-D1Rat85)/Swe Resource Report Resource Website |
RRID:RGD_1600346 | Rattus norvegicus | This is a congenic substrain derived by intercrossing female F344/Crl and male F344.GK-(D1Arb42a-D1Rat90)/Swe. F2 progeny carried the homozygous GK/Swe genome in different segments. These were then maintained by bxs breeding. | 1600346 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 1600346 | 2026-02-14 03:49:44 | 0 | |||||
|
SS.LEW-(D10Mco113-D10Got93)/Mco Resource Report Resource Website |
RRID:RGD_1642970 | Rattus norvegicus | This is a congenic substrain developed by crossing SS.LEW-(D10Mco84-D10Got93)/Mco to SS/Jr to get F2 which were again crossed with SS/Jr to duplicate the recombinant region | 1642970 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 1642970 | 2026-02-14 03:49:44 | 0 | |||||
|
SS.SR-(D3Mco24-D3Got130)/Jr Resource Report Resource Website |
RRID:RGD_1582187 | Rattus norvegicus | SS.SR-(D3Mco19-D3Mco5)/Jr rats were crossed with SS to yield F1, these heterozygous rats were intercrossed to obtain F2 which were screened to identify the SR-rat derived region, these were then crossed with SS to duplicate the recombinant chromosome | 1582187 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 1582187 | 2026-02-14 03:49:44 | 0 |
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