Searching the RRID Resource Information Network
Are you sure you want to leave this community? Leaving the community will revoke any permissions you have been granted in this community.
SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.
| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
Bpod Resource Report Resource Website 10+ mentions |
Bpod (RRID:SCR_015943) | software resource | Software for a measurement and control system for behavior research, most often used to implement operant (Go/NoGo, 2AFC) tasks. This software controls a hierarchy of hardware modules, each powered by an Arduino-programmable microcontroller. | sanworks, rodent, behavior, experiment, control, software, hardware, arduino, measurement | is listed by: OpenBehavior | Open source, Free, Available for download | https://github.com/sanworks/Bpod | SCR_015943 | 2026-02-07 02:09:21 | 34 | |||||||||
|
Social LEAP Resource Report Resource Website 1+ mentions |
Social LEAP (RRID:SCR_021382) | SLEAP | software resource | Method for pose estimation that uses deep neural networks.Open source software tool as deep learning based framework for estimating positions of animal body parts.Supports multi animal pose estimation and tracking, and includes advanced labeling or training.SLEAP is next generation of LEAP and allows for tracking multiple animals. | Estimating positions, animal body parts, multi animal pose estimation, multi animal pose tracking, Princeton University, OpenBehavior |
is listed by: OpenBehavior is related to: SLEAP, LEAP and MotionMapper project has parent organization: Princeton University; New Jersey; USA |
NSF GRFP ; DGE 1148900;Princeton Porter Ogden Jacobus Fellowship;NIMH R00 MH109674;NIGMS DP2 GM137424;NSF ; DEB 1754476;R01 NS104899;NSF ; PHY 1734030; |
DOI:10.1101/2020.08.31.276246 | Free, Available for download, Freely Available | https://edspace.american.edu/openbehavior/project/sleap/ | SCR_021382 | Social LEAP Estimates Animal Pose | 2026-02-07 02:11:16 | 6 | |||||
|
Pulse Pal Resource Report Resource Website |
Pulse Pal (RRID:SCR_021611) | software resource | Software tool as part of Pulse Pal system which allows users to create and trigger software defined trains of voltage pulses with high temporal precision. | voltage pulses, pulse train generator, OpenBehavior |
is listed by: OpenBehavior is related to: Pulse Pal project |
Free, Available for download, Freely Available | https://edspace.american.edu/openbehavior/project/pulse-pal/ | SCR_021611 | 2026-02-07 02:11:15 | 0 | |||||||||
|
SpikeGadgets Resource Report Resource Website 1+ mentions |
SpikeGadgets (RRID:SCR_021623) | commercial organization | Company to design and sell powerful neuroscience hardware that interfaces with open source software platform supported by large community of scientists and developers. Support efforts of open source community in commercially sustainable way. | Open Behavior | is listed by: OpenBehavior | SCR_021623 | SpikeGadgets | 2026-02-07 02:11:16 | 1 | ||||||||||
|
FreemoVR Resource Report Resource Website |
FreemoVR (RRID:SCR_021601) | software resource | Software tool as virtual reality engine built on ROS and OpenSceneGraph.Perspective correct Virtual Reality for freely moving animals engine. Used for multicomputer realtime tracking and display with goal of being useful for scientific studies of vision and behavior.Part of FreemoVR system. | Virtual reality engine, ROS, OpenSceneGraph, OpenBehavior |
is listed by: OpenBehavior is related to: FreemoVR project |
DOI:10.1038/nmeth.4399 | Free, Available for download, Freely Available | https://edspace.american.edu/openbehavior/project/freemovr/ | SCR_021601 | freemovr_engine | 2026-02-07 02:11:15 | 0 | |||||||
|
Modular Automated Platform for Large Scale Experiments Resource Report Resource Website |
Modular Automated Platform for Large Scale Experiments (RRID:SCR_021600) | software resource | Software tool to automate various fly handling tasks.Control software for Drosophila handling robot MAPLE. | Control Drosophila handling robot MAPLE, FlySorter fly manipulation platform control, OpenBehavior |
is listed by: OpenBehavior is related to: Modular Automated Platform for Large Scale Experiments project |
DOI:10.1101/239459 | Free, Available for download, Freely Available | https://edspace.american.edu/openbehavior/project/maple/ | SCR_021600 | MAPLEControlSoftware, MAPLE v2 Control Software | 2026-02-07 02:11:25 | 0 | |||||||
|
poke device arduino Resource Report Resource Website |
poke device arduino (RRID:SCR_021608) | software resource | Software tool as script to test if IR led, IR photodiode, arduino and 3D printed nose poke device work properly. Part of Nose Poke Device system. | OpenBehavior, nose poke device, microcontroller code, electronic parts conrol |
is listed by: OpenBehavior is related to: Nose Poke Device |
Free, Available for download, Freely Available | https://edspace.american.edu/openbehavior/project/nose-poke-device/ | SCR_021608 | poke_device_arduino | 2026-02-07 02:11:25 | 0 | ||||||||
|
Hybrid-drive combining Optogenetics, Pharmacology, and Electrophysiology Resource Report Resource Website |
Hybrid-drive combining Optogenetics, Pharmacology, and Electrophysiology (RRID:SCR_021606) | software resource | Softwre tool as part of Hybrid-drive combining Optogenetics, Pharmacology, and Electrophysiology project for brain implant. | Software resource, OpenBehavior |
is listed by: OpenBehavior is related to: Hybrid-drive combining Optogenetics, Pharmacology, and Electrophysiology project |
DOI:10.3389/fncir.2018.00041 | Free, Available for download, Freely Available | https://edspace.american.edu/openbehavior/project/hope/ | SCR_021606 | hope | 2026-02-07 02:11:02 | 0 | |||||||
|
OORTT Resource Report Resource Website |
OORTT (RRID:SCR_022331) | software resource | Software Pyton scripts to run computerised task of Reaction Time. Scripts, together with their instructions and scoresheets.Used for assessment of RTs that is freely available, compatible with all operating systems, without license and activation costs, and based on open source software platform. | OpenBehavior, behavioral measurment, reaction time, assessment of reaction times, OpenSesame 3.1.9 | is listed by: OpenBehavior | DOI:10.1007/s10072-020-04839-y | Free, Available for download, Freely available | https://osf.io/xvcg6/ | SCR_022331 | Open source Open access Reaction Time Test | 2026-02-07 02:11:31 | 0 | |||||||
|
Wheel Running Activity acQuisition Resource Report Resource Website |
Wheel Running Activity acQuisition (RRID:SCR_023353) | WRAQ | software resource | Open source microcontroller based system for wheel running activity in mice.Used to track circadian rhythms of rodents using microcontroller, powered by lithium polymer battery, and surveys exercise activity for up to 30 days. Data can be stored on microSD card or using online server using WiFi connection. Python software provides system interface with ActogramJ to analyze chronobiological aspects of data.Repository includes guide for installing integrated developmental environment and dependent libraries for building and setting up WRAQ systems - WRAQ and WRAQ-Wifi. WRAQ and WRAQ-WiFi are based on Adafruit Adalogger and DFRobot FireBeetle ESP32 connected to 4- and 8-bit binary counters receiving signal from reed switch attached to 5-inch flying saucer respectively. | OpenBehavior, instrument, building and setting up WRAQ systems, measure mouse wheel running activity, mouse wheel running, monitor wheel running activity, | is listed by: OpenBehavior | PMID:34479979 | Free, Freely available | https://edspace.american.edu/openbehavior/project/wraq/ | SCR_023353 | WRAQ system, Wheel Running Activity acQuisition system | 2026-02-07 02:12:12 | 0 | ||||||
|
CaT-z Resource Report Resource Website |
CaT-z (RRID:SCR_023399) | software resource | Software tool for 3D tracking and automatic classification of rodent behavior. Used for acquisition, annotation, and automatic behavioral profile characterization of laboratory rodents' RGB-D videos. Utilizes video segmentation, tracking of body parts, and automated classification of behaviors through machine learning and computer vision methods. Setup uses low costing RGB-D cameras for tracking behaviors in various environments. Software includes GUI interfaces for video acquisition, annotation, and processing of behavioral data. Software is capable of automated behavior detection with only 30 minutes of annotated video. | 3D tracking, automatic classification, rodent behavior, behavioral analysis, individual rats, automated behavior detection, OpenBehavior | is listed by: OpenBehavior | Portugal National Funds | DOI:10.3758/s13428-020-01381-9 | Free, Available for download, Freely available | https://edspace.american.edu/openbehavior/project/cat-z/ | SCR_023399 | Classification and Tracking in depth (z) | 2026-02-07 02:12:13 | 0 | ||||||
|
JAX Animal Behavior System Resource Report Resource Website |
JAX Animal Behavior System (RRID:SCR_023721) | JABS | software resource | Video based phenotyping platform for laboratory mouse. Provides complete details of software and hardware, including 3D designs used for data collection. Data acquisition system consists of video collection hardware and software, behavior labeling and active learning app, and online database for sharing classifiers. Hardware and software solution collects high quality data for behavior analysis. | OpenBehavior, data acquisition system, integrated mouse phenotyping platform, behavior analysis, | is listed by: OpenBehavior | Jackson Laboratory Directors Innovation Fund ; NIDA DA041668; NIDA DA048634 |
DOI:10.1101/2022.01.13.476229 | Free, Available for download, Freely available | SCR_023721 | 2026-02-07 02:12:15 | 0 | |||||||
|
Customized Guide Cannulas Resource Report Resource Website |
Customized Guide Cannulas (RRID:SCR_023941) | instrument resource | Open source modular apparatus to produce guide cannulas exploiting 3D printing technology. Step by step procedure to realize hippocampal guide cannulas. 3D-printed guide cannula implant, as well as rotary tool based cutting station for fabrication of cannulae. Useful to conduct research in all the fields where access to brain areas is needed. | OpenBehavior, apparatus, 3D-printed guide cannula implant, produce guide cannulas, brain 3D printing, hippocampal guide cannulas, hippocampal guide cannulas procedure, neuroscience, | is listed by: OpenBehavior | PMID:36104275 | Free, Freely available | SCR_023941 | 2026-02-07 02:12:06 | 0 | |||||||||
|
Customizable Multielectrode Array Resource Report Resource Website |
Customizable Multielectrode Array (RRID:SCR_024551) | CMEA | instrument resource | Simple, lightweight, and low cost customizable multielectrode array for Local Field Potential recordings. Used to collect LFP data from different brain regions simultaneously in rats. Can be modified to record single unit and multiunit activity in addition to LFP activity using both wired and wireless neural data acquisition systems. | OpenBehavior, instrument, multielectrode array, Local Field Potential Recordings, LFP recordings, collect LFP data, brain regions LFP data, record single unit and multiunit activity, wired neural data acquisition system, wireless neural data acquisition system, explore neural activity, | is listed by: OpenBehavior | Government of Canada Natural Sciences and Engineering Research Council of Canada | Free, Freely available | SCR_024551 | , CMEA: Customizable Multielectrode Arrays, 16-channel customizable multielectrode array | 2026-02-07 02:12:10 | 0 | |||||||
|
Optimouse project Resource Report Resource Website |
Optimouse project (RRID:SCR_021463) | data or information resource, portal, project portal | Project related to individual mice positions analysis, specifically their nose positions. Includes software tool for analysis of mouse position data designed by Hebrew University scientists. Provides open source software to analyze positions of individual mice, specifically their nose positions, in behavioral arena with the goal of minimizing error. | Mouse position data analysis, mouse position, position data, nose position, OpenBehavior |
is listed by: OpenBehavior is related to: Optimouse has parent organization: Hebrew University of Jerusalem; Jerusalem; Israel |
DOI:10.1186/s12915-017-0377-3 | Free, Freely available | SCR_021463 | Optimouse | 2026-02-12 09:47:12 | 0 | ||||||||
|
MouseMove project Resource Report Resource Website |
MouseMove project (RRID:SCR_021581) | data or information resource, portal, project portal | Portal provides MouseMove software system used to analyze Open Field behavior of mice after experimental stroke to show reduced locomotor activity and to quantify laterality deficits. System is used in combination with open source program ImageJ and MTrack2 plugin to analyze pre recorded Open Field test video. System has two downloadable components, ImageJ macro and separate program with custom built MouseMove GUI. ImageJ is used to subtract background video from experiment and create image of animals total trajectory. MouseMove GUI then completes detailed analysis of movement patterns, measuring fractional time spent stationary, distance traveled, speed mean and various details of laterality. | Open Field behavior analysis, mice after experimental stroke, reduced locomotor activity, quantify laterality deficits, OpenBehavior |
is listed by: OpenBehavior is related to: MouseMove |
DOI:10.1038/srep16171 | Free, Freely available | SCR_021581 | MouseMove system | 2026-02-12 09:47:21 | 0 | ||||||||
|
Mousetrap project Resource Report Resource Website |
Mousetrap project (RRID:SCR_021456) | data or information resource, portal, project portal | Project related to mouse tracking and analysis of mouse movements during computerized lab experiments. Provides open source software plugin to record and analyze mouse movements. | Record mouse movements, analyze mouse movements, mouse tracking, OpenBehavior |
is listed by: OpenBehavior is related to: Mousetrap |
DOI:10.3758/s13428-017-0900-z | Free, Freely available | SCR_021456 | Mousetrap | 2026-02-12 09:47:19 | 0 | ||||||||
|
MedParse project Resource Report Resource Website |
MedParse project (RRID:SCR_021455) | data or information resource, portal, project portal | Project related to saving precise times of behavioral events.Provides software tool to read MedPC data into Python and Matlab. | Read MedPC data, Python, Matlab, behavioral events, time event codes, OpenBehavior |
is listed by: OpenBehavior is related to: MedParse |
Free, Freely available | SCR_021455 | MedParse | 2026-02-12 09:47:12 | 0 | |||||||||
|
Quantifying Animal Movement from Pre-recorded Videos project Resource Report Resource Website |
Quantifying Animal Movement from Pre-recorded Videos project (RRID:SCR_021436) | STL | data or information resource, portal, project portal | Project related to visualizing and quantifying movement from pre-recorded videos. Provides software toolbox for visualizing and quantifying movement.Used for summarizing animal movement data as single image ( spectral time lapse algorithm) as well as automate analysis of animal movement data. | Visualizing movement, quantifying movement, pre-recorded videos movement, summarizing animal movement data, single image, automate analysis, animal movement data, movement tracking, path analysis, video visualization, video summarization, image analysis, OpenBehavior |
is listed by: OpenBehavior is related to: Quantifying Animal Movement from Pre-recorded Videos |
DOI:10.12688/f1000research.3-19.v1 | Free, Freely available | SCR_021436 | Quantifying Animal Movement from Pre-recorded Videos | 2026-02-12 09:47:19 | 0 | |||||||
|
Behavioral Observation Research Interactive Software project Resource Report Resource Website 1+ mentions |
Behavioral Observation Research Interactive Software project (RRID:SCR_021434) | BORIS | data or information resource, portal, project portal | Project related to computer based review of previously recorded videos or live observations. Related to study of animal and human behavior. Provides open source, multiplatform standalone program that allows user specific coding environment for computer based review of previously recorded videos or live observations.Developed by scientists from University of Turin. | Specific coding environment, computer based review, previously recorded videos review, live observations review, OpenBehavior |
is listed by: OpenBehavior is related to: Behavioral Observation Research Interactive Software has parent organization: University of Turin;Turin;Italy |
DOI:10.1111/2041-210x.12584 | Free, Freely available | SCR_021434 | Behavioral Observation Research Interactive Software | 2026-02-12 09:47:19 | 9 |
Can't find your Tool?
We recommend that you click next to the search bar to check some helpful tips on searches and refine your search firstly. Alternatively, please register your tool with the SciCrunch Registry by adding a little information to a web form, logging in will enable users to create a provisional RRID, but it not required to submit.
Welcome to the dkNET Resources search. From here you can search through a compilation of resources used by dkNET and see how data is organized within our community.
You are currently on the Community Resources tab looking through categories and sources that dkNET has compiled. You can navigate through those categories from here or change to a different tab to execute your search through. Each tab gives a different perspective on data.
If you have an account on dkNET then you can log in from here to get additional features in dkNET such as Collections, Saved Searches, and managing Resources.
Here is the search term that is being executed, you can type in anything you want to search for. Some tips to help searching:
If you are logged into dkNET you can add data records to your collections to create custom spreadsheets across multiple sources of data.
Here are the facets that you can filter the data by.
If you have any further questions please check out our FAQs Page to ask questions and see our tutorials. Click this button to view this tutorial again.
The NIDDK Information Network (dkNET) serves the needs of basic and clinical investigators by providing seamless access to large pools of data and research resources relevant to the mission of The National Institute of Diabetes Digestive and Kidney Diseases (NIDDK). dkNET is hosted at University of California San Diego, and is supported by NIH NIDDK grant 2U24DK097771-09.
Email: info_at_ dknet.org
