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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Applied Biosystems 3730 Genetic Analyzer Resource Report Resource Website 1+ mentions |
Applied Biosystems 3730 Genetic Analyzer (RRID:SCR_018052) | instrument resource | Medium to high throughput genetic analyzer that performs DNA fragment analysis applications such as microsatellites, AFLP, SNP analysis, mutation detection and traditional DNA sequencing. Upgradeable to 96 capillaries. | ABRF, genetic analyzer, 96 capillary electrophoresis, DNA fragment analysis, microsatellites, AFLP, SNP analysis, mutation detection, DNA sequencing, instrument, equipment | is listed by: USEDit | Model_Number_3730 | https://assets.thermofisher.com/TFS-Assets/LSG/manuals/4478016A.pdf | SCR_018052 | 3730 DNA Analyzer | 2026-02-14 02:03:26 | 3 | ||||||||
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Eppendorf 5418 R Centrifuge Resource Report Resource Website |
Eppendorf 5418 R Centrifuge (RRID:SCR_018050) | instrument resource | Refridgerated centrifuge with 18 place capacity rotor that accomdates low to medium capacity in 1.5 or 2.0 mL tubes and Microtainer. Speed allows for standard molecular biology applications. Compact size and quiet operation. | ABRF, refrigerated centrifuge, Eppendorf, benchtop centrifuge, instrument, equipment | is listed by: USEDit | Model_Number_5418_R | https://www.eppendorf.com/product-media/doc/en/173997/Eppendorf_Centrifugation_Operating-manual_Centrifuge-5418-R.pdf | SCR_018050 | Eppendorf 5418 Centrifuge (2) | 2026-02-14 02:03:16 | 0 | ||||||||
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Bio-Rad CFX384 Real-Time Detection System Resource Report Resource Website 10+ mentions |
Bio-Rad CFX384 Real-Time Detection System (RRID:SCR_018057) | instrument resource | Real Time PCR instrument in 384-well format that performs high-throughput data acquisition. System utilizes temperature control and sensitive, 4-color detection optics to deliver qPCR results for singleplex or multiplex reactions. Quickly set up runs and monitor amplification traces in real time on integrated LCD touch screen, or use CFX Maestro Software to design experiment and analyze results from connected computer. | ABRF, Real-Time Instrument, RT PCR, equipment, Bio Rad | is listed by: USEDit | Model_Number_CFX384 | https://www.bio-rad.com/webroot/web/pdf/lsr/literature/Bulletin_5639C.pdf | SCR_018057 | Bio-Rad CFX384 Real-Time System | 2026-02-14 02:03:32 | 27 | ||||||||
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BD Scientific FACSCanto Flow Cytometer Resource Report Resource Website 10+ mentions |
BD Scientific FACSCanto Flow Cytometer (RRID:SCR_018055) | instrument resource | Flow cytometry system that performs reliable performance, accuracy, and ease-of-use for clinical diagnostic services. System has 10 color capability, optical enhancements, and 4-3-3 configuration deliver high sensitivity and resolution for accurate results. | ABRF, Flow Cytometer, flow cytometry, multicolor analysis, BD FACSCanto, instrument, equipment | is listed by: USEDit | Model_Number_Canto | https://www.bdbiosciences.com/content/dam/bdb/marketing-documents/facscanto_techspecs.pdf | SCR_018055 | Canto-blue and red lasers | 2026-02-14 02:03:30 | 17 | ||||||||
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Bruker 9.4T Biospec Biospec Magnetic Resonance Imaging Resource Report Resource Website 1+ mentions |
Bruker 9.4T Biospec Biospec Magnetic Resonance Imaging (RRID:SCR_018054) | instrument resource | MRI system that performs preclinical and molecular MR imaging. MRI CryoProbe technology combined with ultra high field USR magnets deliver high spatial resolution in-vivo. Any small animal MR imaging application in life science, biomedical and preclinical research can be conducted. | ABRF, Magnetic Resonance Imaging, small animal imaging, BioSpec, Bruker, preclinical veterinary imaging, molecular MRI, instrument, equipment | is listed by: USEDit | Model_Number_Biospec | SCR_018054 | 9.4T Bruker Biospec MRI | 2026-02-14 02:03:16 | 6 | |||||||||
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BGISEQ-500 Resource Report Resource Website 10+ mentions |
BGISEQ-500 (RRID:SCR_017979) | instrument resource | Desktop sequencer developed by BGI. Using DNA nanoball and combinational probe anchor synthesis developed from Complete Genomics sequencing technologies, it generates short reads at large scale. BGI/MGI Sequencer. | sequencing machine, hardware, high-throughput sequencing, instrument, equipment | is used by: BGI DNBSeq PE150 BGISEQ-500 sequencing system | DOI:10.1093/gigascience/giy144 DOI:10.1101/786962 |
Restricted | https://www.bgi.com/global/company/careers/bgi-launches-its-desktop-sequencer-bgiseq-500/ | SCR_017979 | 2026-02-14 02:03:24 | 25 | ||||||||
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DNBSEQ-T7 Resource Report Resource Website 10+ mentions |
DNBSEQ-T7 (RRID:SCR_017981) | instrument resource | Sequencer can generate 1-6Tb of high quality data per day, for wide range of applications including Whole Genome Sequencing, Deep Exome Sequencing, Epigenome Sequencing, Transcriptome Sequencing, and targeted panel projects. Powered by DNBSEQTM Technology, DNBSEQ-T7 makes sequencing more efficient and productive with advances in biochemical, fluidics, and optical systems. Detection and characterization of copy number variants based on whole-genome sequencing by MGI platforms. | sequencing machine, hardware, high-throughput sequencing, instrument, equipment | DOI:10.1101/786962 | Restricted | https://en.mgi-tech.com//Uploads/Temp/file/20230619/648fc032e4af9.pdf | SCR_017981 | 2026-02-14 02:03:15 | 23 | |||||||||
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PacBio RS II Sequencing System Resource Report Resource Website 1+ mentions |
PacBio RS II Sequencing System (RRID:SCR_017988) | instrument resource | Sequencer by Pacific Biosciences. System allows scientists to generate finished genome assemblies, reveal and understand epigenomes, and characterize genomic variation. It achieves longest read lengths and highest consensus accuracy. Finishes microbial genomes and improves assembly of larger organisms with multi-kilobase reads and unbiased coverage regardless of GC content. No amplification is required. | sequencing machine, hardware, high-throughput sequencing, instrument, equipment | Restricted | https://www.mscience.com.au/upload/pages/pacbio/pacbio_rs_ii_brochure.pdf | SCR_017988 | RS II System, RS II Sequencing System | 2026-02-14 02:03:31 | 7 | |||||||||
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PromethION Resource Report Resource Website 50+ mentions |
PromethION (RRID:SCR_017987) | instrument resource | System offers real-time, long-read, direct DNA and RNA sequencing by Oxford Nanopore Technologies. System suitable for large scale projects such as population-scale sequencing or plant genomics, or for large scale service offerings. PromethION 24 and PromethION 48 systems offer ability to run 24 and 48 flow cells respectively. System allows on demand sequencing, using any flow cell at any time. Users can start and stop running individual experiments as required, or deploy multiple flow cells onto single experiments for greater speed or throughput. | sequencing machine, hardware, high-throughput sequencing, instrument, equipment |
is related to: GridION Mk1 is related to: MinION |
Restricted | https://community.nanoporetech.com/requirements_documents/promethion-spec.pdf | SCR_017987 | PromethION 24, PromethION 48 | 2026-02-14 02:03:24 | 83 | ||||||||
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GridION Mk1 Resource Report Resource Website 1+ mentions |
GridION Mk1 (RRID:SCR_017986) | instrument resource | Benchtop sequencing and analysis device designed to run and analyse up to five individually addressable MinION or Flongle Flow Cells by Oxford Nanopore Technologies. Good for labs with multiple projects that need advantages of nanopore sequencing: simple library preparation, real-time analysis and new biological insights from long reads. | sequencing machine, hardware, high-throughput sequencing, instrument, equipment |
is related to: MinION is related to: PromethION |
Restricted | https://community.nanoporetech.com/requirements_documents/gridion-mk1-spec.pdf | SCR_017986 | 2026-02-14 02:03:28 | 6 | |||||||||
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DNBSEQ-G400 Resource Report Resource Website 10+ mentions |
DNBSEQ-G400 (RRID:SCR_017980) | Restricted | instrument resource | Sequencer developed by MGI Tech Co. Ltd. Next generation sequencing platform. Its sequencing principle relies on DNB and cPAS technologies also used in previous version of BGISEQ-500 device, but reagents for MGISEQ-2000 are refined and platform utilizes updated software. Built with new chip system that can flexibly support variety of different sequencing models. | sequencing machine, hardware, high-throughput sequencing, instrument, equipment | DOI:10.1101/577080 | https://en.mgi-tech.com//Uploads/Temp/file/20220616/62aacd2432d7b.pdf | SCR_017980 | MGISEQ-2000 | 2026-02-14 02:03:31 | 13 | ||||||||
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Leica EG1160 Embedding Station Resource Report Resource Website |
Leica EG1160 Embedding Station (RRID:SCR_018033) | instrument resource | Paraffin embedding station that provides constant, reproducible paraffin flow at ten different flow rate settings. All instrument functions, including automatic starting time, are individually programmable at press of button. Compact dimensions, ease of operation, and high standards of convenience. Separately-heated paraffin dispensing system with integrated filter provides constant, reproducible paraffin flow at ten different flow rate settings. | ABRF, paraffin embedding station, Leica, instrument, equipment | is listed by: USEDit | Model_Number_1160 | https://bme.columbia.edu/files/seasdepts/biomedical-engineering/pdf-files/Leica_EG1160_Manual.pdf | SCR_018033 | EG 1160 paraffin embedding station | 2026-02-14 02:03:16 | 0 | ||||||||
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Molecular Dynamics Storm 860 Molecular Imager Resource Report Resource Website |
Molecular Dynamics Storm 860 Molecular Imager (RRID:SCR_018032) | instrument resource | Multifunction phosphoimager fluorimager laser scanner that collects fluorescent or storage phosphor images from gels, membranes and phosphor screens. It is equipped with blue (450 nm) and red (635 nm) lasers, can scan at resolutions down to 50 microns. It is able to quantify radioactive gels for commonly used isotopes such as 32P, 33P, 125I, 35S, and 14C. There are three detection modes: phosphor screen mode, red/blue fluorescence, chemifluorescence. | ABRF, molecular imager, GE HealthCare, gel, blot, analysis, laser scanner, instrument, equipment | is listed by: USEDit | Model_Number_Storm 860 Imager | https://btiscience.org/wp-content/uploads/2014/04/Storm_User_Manual.pdf | https://www.mbl.edu/jbpc/files/2014/05/Storm_Info.pdf | SCR_018032 | Storm 860 Molecular Imager, Storm Gel and Blot Imaging System | 2026-02-14 02:03:32 | 0 | |||||||
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PacBio Sequel System Resource Report Resource Website 10+ mentions |
PacBio Sequel System (RRID:SCR_017989) | instrument resource | Single Molecule, Real-Time sequencer by Pacific Biosciencies. System provides higher throughput, more scalability, reduced footprint and lower sequencing project costs compared to PacBi RS II System, while maintaining benefits of SMRT technology. Ideal for projects such as generating high quality, whole genome de novo assemblies for larger genomes, such as human, plants, and animals. Provides characterization of wide variety of genomic variation types, including those in complex regions not accessible with short-read or synthetic long-range sequencing technologies, while simultaneously revealing epigenetic information. | sequencing machine, hardware, high-throughput sequencing, instrument, equipment | Restricted | https://www.pacb.com/wp-content/uploads/Operations-Guide-Sequel-II-and-Sequel-IIe-Systems.pdf | SCR_017989 | PacBio Sequel™ System, Sequel System | 2026-02-14 02:03:15 | 28 | |||||||||
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Applied Biosystems 3130xl Capillary Array Resource Report Resource Website |
Applied Biosystems 3130xl Capillary Array (RRID:SCR_018048) | instrument resource | Genetic analyzer that performs fragment analysis and rapid sequencing applications. Usage per array is 100 runs with use of Applied Biosystems reagents. | ABRF, capillary fluorescence sequencer, 16-capillary array, genetic analyzer, instrument, equipment | is listed by: USEDit | Model_Number_3130xl | https://assets.thermofisher.com/TFS-Assets/LSG/manuals/4477796.PDF | SCR_018048 | Applied Biosystems 3130xl capillary fluorescence sequencer | 2026-02-14 02:03:26 | 0 | ||||||||
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Saphyr Resource Report Resource Website 1+ mentions |
Saphyr (RRID:SCR_017992) | instrument resource | Whole genome imaging instrument by Bionano Genomics for high speed, high throughput structural variant detection and analysis with exceptional sensitivity and specificity. Detects structural variations ranging from 500 bp to megabase pairs in length. For mosaic samples or heterogeneous cancer samples, detects all types of structural variants down to 5% Variant Allele Fraction. Calls repeats and complex rearrangements. | sequencing machine, hardware, high-throughput sequencing, instrument, equipment | Restricted | https://www.analogway.com/files/uploads/produit/download/user-manual-saphyr.pdf | https://bionanogenomics.com/products/saphyr/ | SCR_017992 | BIONANO SAPHYR® GENOME IMAGING | 2026-02-14 02:03:31 | 6 | ||||||||
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GE Healthcare 9410 Variable Mode Imager Resource Report Resource Website 1+ mentions |
GE Healthcare 9410 Variable Mode Imager (RRID:SCR_018047) | instrument resource | Variable mode imager that operates in three different modes, including phosphorescence, fluorescence, and chemiluminescence. Can scan in visible range using reflected light. Scanning resolution ranges from 1000um down to 10um. Scanning software is linked to ImageQuant TL 7.0 analysis software. ImageQuant is capable of quantifying Typhoon images such as those from Northern or Western blots. Images can be saved in various formats and imported into Powerpoint slides. Instrument has three excitation lasers (532nm, 633nm, 488nm). Instrument utilizes 536SP, 670BP, 520BP emission filters for fluorescence. For DNA, RNA and protein samples you may choose from: storage phosphor auto-radiography, direct blue-excited fluorescence (457-488 nm), direct green-excited fluorescence (532 nm), direct red-excited fluorescence (633 nm), and chemiluminescence. | ABRF, scanner, phosphorescence, fluorescence, chemiluminescence, microarray imager, instrument, equipment | is listed by: USEDit | Model_Number_9410 | https://nba.uth.tmc.edu/Assets/pdf/other/typhoon_supporting_files/typhoon_operating_instructions.pdf | SCR_018047 | Typhoon 9410 Multi-Image scanner (GE Healthcare) | 2026-02-14 02:03:30 | 1 | ||||||||
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Leica Biosystems RM2265 Fully Automated Rotary Microtome Resource Report Resource Website 1+ mentions |
Leica Biosystems RM2265 Fully Automated Rotary Microtome (RRID:SCR_018041) | instrument resource | Automated rotary microtome that sections tissue samples. Specimen feed system with zero-backlash and maintenance-free cross roller guides and stepper motor operated coarse feed system are located in dust-proof plastic housing. Equipped with safety handwheel with handle that can be centered, as well as mechanical handwheel lock. In manual operation retraction can be adjusted. In motorized operation retraction value varies with selected sectioning speed. | ABRF, automated microtome, tissue sample sectioning, Leica, instrument, equipment | is listed by: USEDit | Model_Number_2265 | https://www.biomarker.hu/sites/default/files/katalogus-fajlok/95.11560_rev_b_brochure_rm2265_en.pdf | SCR_018041 | Leica RM2265 automated microtome | 2026-02-14 02:03:32 | 9 | ||||||||
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Leica RM2125 RTS Manual Microtome Resource Report Resource Website 1+ mentions |
Leica RM2125 RTS Manual Microtome (RRID:SCR_018040) | instrument resource | Manual rotary microtome that sections tissue samples. Features include precise feed mechanism, powerBase that ensures stable operation for vibration-free sectioning, advanced knife holder and specimen clamp securely align cutting edge to block, user-selectable coarse feed wheel turn direction and retraction functions, hand wheel, in-built safety guards and rounded shape with arm rests for fatigue-free sectioning,quick-exchange specimen clamp and orientation system for object head allow rapid set up for any block, and two trim steps. | ABRF, paraffin microtome, manual rotary, tissue sample sectionin g, Leica, instrument, equipment | is listed by: USEDit | Model_Number_2125 | https://www.leicabiosystems.com/sites/default/files/media_product-download/2022-01/Leica_RM2125RTS_IFU_2v9M_en.pdf | SCR_018040 | RM 2125 paraffin microtome | 2026-02-14 02:03:25 | 4 | ||||||||
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Applied Biosystems 3130 Genetic Analyzer Resource Report Resource Website 1+ mentions |
Applied Biosystems 3130 Genetic Analyzer (RRID:SCR_018046) | instrument resource | Genetic analyzer can run sequencing and fragment analysis applications including microsatellite analysis, AFLP, LOH, SNP validation, and SNP screening. Maintenance time is reduced by eliminating manual syringe washing and filling with automated polymer delivery. Can increase data quality for sequencing and fragment analysis applications by longer read length, and higher resolution with shorter run times. Uses 96- or 384-well plates with four capillary array. | ABRF, genetic analyzer, 4 capillary electrophoresis, DNA sequencer, microsatellite analysis, AFLP, LOH, SNP validation, SNP screening, instrument, equipment | is listed by: USEDit | Model_Number_3130 | https://assets.thermofisher.com/TFS-Assets/LSG/manuals/4477796.PDF | SCR_018046 | Applied Biosystems 3130 (4-capillary) Genetic Analyzer, Genetic Analyzer (4 capillary) | 2026-02-14 02:03:16 | 2 |
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