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http://purl.bioontology.org/ontology/BOF
An ontology of biodiversity of INPA
Proper citation: Biodiversity Ontology (RRID:SCR_010204) Copy
http://www.allseq.com/default.aspx
Free online tools to find the best Sequencing Service provider for your project.
Proper citation: AllSeq (RRID:SCR_010053) Copy
http://purl.bioontology.org/ontology/COGAT
Ontology that characterizes the state of current thought in cognitive science. It defines a set of mental concepts along with a set of mental tasks, and the measurement relations between those classes.
Proper citation: Cognitive Atlas Ontology (RRID:SCR_010295) Copy
http://purl.bioontology.org/ontology/CTCAE
A coding system for reporting adverse events that occur in the course of cancer therapy. It was derived from the Common Toxicity Criteria (CTC) v2.0 and is maintained by the Cancer Therapy Evaluation Program (CTEP) at the National Cancer Institution (NCI).
Proper citation: Common Terminology Criteria for Adverse Events (RRID:SCR_010296) Copy
http://sourceforge.net/apps/mediawiki/cdao/
A formalization of concepts and relations relevant to evolutionary comparative analysis, such as phylogenetic trees, OTUs (operational taxonomic units) and compared characters (including molecular characters as well as other types). CDAO is being developed by scientists in biology, evolution, and computer science
Proper citation: Comparative Data Analysis Ontology (RRID:SCR_010297) Copy
http://purl.bioontology.org/ontology/CARELEX
Categories and terms used to classify content (documents, images, etc) in electronic content repositories for life science / BioPharma. Initial version contains content model for use with clinical trial electronic Trial Master Files or eTMF archives. A Content model contains content classification categories (classes) and metadata properties (data properties). Data properties should be assigned to each Content Type. Recent changes include: addition of electronic signature support, medical imaging classifications.
Proper citation: Content Archive Resource Exchange Lexicon (RRID:SCR_010298) Copy
https://www.universite-lyon.fr/
University of Lyon, located in Lyon and Saint-Étienne, France, is a center for higher education and research comprising 11 members and 24 associated institutions.
Proper citation: University of Lyon; France (RRID:SCR_010178) Copy
http://purl.bioontology.org/ontology/AAO
A structured controlled vocabulary of the anatomy of Amphibians. Note that AAO is currently being integrated into Uberon.
Proper citation: Amphibian Gross Anatomy Ontology (RRID:SCR_010291) Copy
http://purl.bioontology.org/ontology/HRDO
A core ontology consistent with a metamodel (disorders and groups of disorders, genes, clinical signs and their relations) and an instantiation of this metamodel with Orphanet Data (available on http://orphadata.org). Research experiments demonstrated (i) efficient classifications generation based on SPARQL Construct, (ii) perspectives in semantic audit of a knowledge base, (iii) semantic comparison with OMIM (www.omim.org) using proximity measurements and (iv) opened perspectives in knowledge sharing (LORD, http://lord.bndmr.fr). Current production services of Orphanet developed ORDO, released in 2014, an ontology synchronized with their production database.
Proper citation: Disease core ontology applied to Rare Diseases (RRID:SCR_010308) Copy
Public research university in San Diego, California. Founded in 1897 as San Diego Normal School, it is the third-oldest university in the 23-member California State University system.
Proper citation: San Diego State University; California; USA (RRID:SCR_009874) Copy
http://dna.engr.uconn.edu/?page_id=105
Software package that can be used to infer isoform and gene expression levels from high-throughput transcriptome sequencing (RNA-Seq) data.
Proper citation: IsoEM (RRID:SCR_009993) Copy
A research department of the University of York provides research-based information about the effects of health and social care interventions via their databases. The institute undertakes systematic reviews evaluating research evidence on health and public health questions of national and international importance.
Proper citation: Centre for Reviews and Dissemination (RRID:SCR_010267) Copy
http://purl.bioontology.org/ontology/CPTH
Metathesaurus of current procedural terminalogy (CPT).
Proper citation: Current Procedural Terminalogy Hierarchy (RRID:SCR_010300) Copy
http://purl.bioontology.org/ontology/IDODEN
An ontology for dengue fever.
Proper citation: Dengue Fever Ontology (RRID:SCR_010304) Copy
http://purl.bioontology.org/ontology/DERMLEX
A standardized terminology of dermatologic diagnoses, therapies, procedures, and laboratory tests.
Proper citation: Dermatology Lexicon (RRID:SCR_010305) Copy
http://purl.bioontology.org/ontology/DOCCC
Diagnosis ontology of clinical care classification.
Proper citation: Diagnosis Ontology of Clinical Care Classification (RRID:SCR_010306) Copy
http://www.sbg.bio.ic.ac.uk/phyre2
A structure prediction system to reliably detect remote homologies.
Proper citation: Phyre (RRID:SCR_010270) Copy
http://www.biobase-international.com
THIS RESOURCE IS OUT OF SERVICE, documented on February 1st,2022. BIOBASE offers academic and non-profit organizations free access to TRANSFAC?? non-professional version with much reduced functionality and content compared to our professional database.
Proper citation: BIOBASE Corporation (RRID:SCR_010271) Copy
http://purl.bioontology.org/ontology/BNO
Ontology that relates concepts and terminologies used for human nutrition in a clinical and biomedical setting.
Proper citation: Bionutrition Ontology (RRID:SCR_010272) Copy
http://code.google.com/p/bitseq/
A software application for inferring expression levels of individual transcripts from sequencing (RNA-Seq) data and estimating differential expression (DE) between conditions.
Proper citation: BitSeq (RRID:SCR_009904) Copy
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