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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.

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Resource Name Proper Citation Abbreviations Resource Type Description Keywords Resource Relationships Related Condition Funding Defining Citation Availability Website Status Alternate IDs Alternate URLs Old URLs Parent Organization Resource ID Synonyms Record Last Update Mentions Count
Diabetic Complications Consortium
 
Resource Report
Resource Website
100+ mentions
Diabetic Complications Consortium (RRID:SCR_001415) DiaComp material resource, tissue bank, biomaterial supply resource Consortium serving the diabetic complications community that sponsors annual meetings in complications-relevant scientific areas, solicits and funds pilot projects in high impact areas of complications research, and provides resources and data including animal models, protocols and methods, validation criteria, reagents and resources, histology, publications and bioinformatics for researchers conducting diabetic complications research. diabetes, antibody, animal model, assay, experiment, histology, protocol, strain, phenotype, metabolic, cardiovascular, image, data set, community building portal, consortium, FASEB list is used by: NIF Data Federation
is used by: NIDDK Information Network (dkNET)
is listed by: NIDDK Information Network (dkNET)
is listed by: One Mind Biospecimen Bank Listing
is related to: dkCOIN
has parent organization: Augusta University; Georgia; USA
Diabetes, Diabetic complication, Nephropathy, Neuropathy, Retinopathy, Wound healing, Cardiomyopathy, Uropathy NIDDK ;
JDRF
Free, Freely Available nlx_152636 http://www.amdcc.org/ SCR_001415 Animal Models of Diabetic Complications Consortium, AMDCC 2026-02-15 09:18:06 229
HIRN Consortium on Targeting and Regeneration
 
Resource Report
Resource Website
HIRN Consortium on Targeting and Regeneration (RRID:SCR_016201) HIRN-CTAR, CTAR, CTR, HIRN-CTR organization portal, data or information resource, consortium, portal Consortium that is an independent research initiative of the Human Research Information Network (HIRN). It is investigating methods to increase or maintain functional beta cell mass in T1D through targeted manipulation of islet plasticity or engineered protection of beta cells from immune-mediated destruction. plasticity, bioengineering, cell, beta, cell, death is organization facet of: Human Islet Research Network (HIRN) NIDDK ;
NIDDK U01 DK104162;
NIDDK UC4 DK104211;
NIDDK UC4 DK104204;
NIDDK UC4 DK104209;
NIDDK UC4 DK104143;
NIDDK UC4 DK104119;
NIDDK UC4 DK116241;
NIDDK UC4 DK116264;
NIDDK UC4 DK116252;
NIDDK UC4 DK116255;
NIDDK UC4 DK116280
SCR_016201 Consortium on Targeting and Regeneration (HIRN-CTAR) 2026-02-15 09:21:35 0
BioPlex
 
Resource Report
Resource Website
1000+ mentions
BioPlex (RRID:SCR_016144) database, service resource, storage service resource, data repository, data or information resource Database of cell lines with each expressing a tagged version of a protein from the ORFeome collection. The overarching project goal is to determine protein interactions for every member of the collection. cell, line, protein, immunopurification, mass, spectrometry, interaction, bio.tools, FASEB list is listed by: bio.tools
is listed by: Debian
has parent organization: Harvard Medical School; Massachusetts; USA
NHGRI U41HG006673;
NIDDK K01 DK098285;
Canadian Institutes for Health Research
PMID:28514442 biotools:bioplex_2.0 https://bio.tools/bioplex_2.0 SCR_016144 BioPlex (biophysical interactions of ORFeome-based complexes), Harvard BioPlex, Biophysical Interactions of Orfeome-based comPLEXes (BioPLEX) 2026-02-15 09:21:48 1355
HIRN Consortium on Human Islet Biomimetics
 
Resource Report
Resource Website
HIRN Consortium on Human Islet Biomimetics (RRID:SCR_016199) HIRN-CHIB, CHIB organization portal, data or information resource, consortium, portal Consortium that is an independent research initiative of the Human Research Information Network (HIRN). It is combining advances in beta cell biology and cell biology with tissue engineering technologies to develop microdevices that support functional human islets. beta, cell, biology, tissue, bioengineering, nanoengineering, human, stem is organization facet of: Human Islet Research Network (HIRN) NIDDK ;
NIDDK U01 DK104162;
NIDDK UC4 DK104208;
NIDDK UC4 DK104196;
NIDDK UC4 DK104202;
NIDDK UC4 DK104165;
NIDDK UC4 DK116283
SCR_016199 Consortium on Human Islet Biomimetics (HIRN-CHIB) 2026-02-15 09:21:50 0
HIRN Consortium on Beta Cell Death and Survival
 
Resource Report
Resource Website
HIRN Consortium on Beta Cell Death and Survival (RRID:SCR_016198) HIRN-CBDS, CBDS organization portal, data or information resource, consortium, portal Consortium that is an independent research initiative of the Human Research Information Network (HIRN). It is using human tissues to discover highly specific biomarkers of beta cell injury in asymptomatic T1D and developing strategies to stop beta cell destruction early in the disease process. kidney, tissue, biomarker, beta, cell, t1d, disease, research is organization facet of: Human Islet Research Network (HIRN) NIDDK ;
NIDDK U01 DK104162;
NIDDK UC4 DK104205;
NIDDK UC4 DK104155;
NIDDK UC4 DK104167;
NIDDK UC4 DK104166;
NIDDK UC4 DK104159;
NIDDK UC4 DK104216;
NIDDK UC4 DK108132;
NIDDK UC4 DK108101;
NIDDK UC4 DK108120;
NIDDK UC4 DK116274;
NIDDK UC4 DK116278;
NIDDK UC4 DK116271
SCR_016198 Consortium on Beta Cell Death and Survival (HIRN-CBDS) 2026-02-15 09:21:34 0
HIRN Coordinating Center
 
Resource Report
Resource Website
HIRN Coordinating Center (RRID:SCR_016395) HIRN CC, HIRNCC organization portal, data or information resource, consortium, portal Consortium that provides infrastructure to promote communication and collaboration among current and future HIRN participants, facilitating scientific advances and the sharing of data, tools, and reagents among HIRN members and the research community at large. coordination, hirn, human, islet, research, center, administration is organization facet of: Human Islet Research Network (HIRN) NIDDK U01 DK104162 SCR_016395 Human Islet Research Center Coordinating Center 2026-02-15 09:21:39 0
RNA22
 
Resource Report
Resource Website
100+ mentions
RNA22 (RRID:SCR_016507) RNA22 software application, sequence analysis software, data processing software, software resource, data analysis software Software tool as a pattern based algorithm for detecting microRNA binding sites and their corresponding microRNA and mRNA complexes. Allows interactive exploration and visualization of miRNA target predictions. Permits link-out to external expression repositories and databases. pattern, based, detecting, microRNA, binding, site, complex, sequence, genome, analysis, FASEB list is listed by: OMICtools A Star ;
Singapore ;
NIDDK DK04763;
NIH AI54973
Free, Available for download, Freely available SCR_016507 RiboNucleic Acid 22 2026-02-15 09:21:42 192
PICRUSt
 
Resource Report
Resource Website
10+ mentions
PICRUSt (RRID:SCR_016855) PICRUSt software application, simulation software, software resource Software package to predict metagenome functional content from marker gene (e.g., 16S rRNA) surveys and full genomes. Used to predict which gene families are present and then combines gene families to estimate the composite metagenome. predict, metagenome, functional, content, DNA, sample, marker, gene, sequence, data, microbiome, 16S, RNA is related to: PICRUSt2 Canadian Institutes of Health Research ;
Canada Research Chairs program ;
Howard Hughes Medical Institute ;
NIDDK P01 DK078669;
NHGRI U01 HG004866;
NHGRI R01 HG004872;
Crohn’s and Colitis Foundation of America ;
Sloan Foundation ;
NHGRI R01 HG005969;
NSF CAREER DBI1053486;
ARO W911NF1110473
PMID:23975157 Free, Available for download, Freely available SCR_016856 SCR_016855 Phylogenetic Investigation of Communities by Reconstruction of Unobserved States, PICRUSt 2026-02-15 09:21:50 36
TopDom
 
Resource Report
Resource Website
10+ mentions
TopDom (RRID:SCR_016964) TOPDOM software application, data processing software, software resource, software toolkit, data analysis software Software tool to identify Topological Domains, which are basic builiding blocks of genome structure. Detects topological domains in a linear time., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025. identify, topological, domain, genome, structure, linear, time, data, analysis has parent organization: University of Southern California; Los Angeles; USA
works with: CCTOP
NHLBI U01 HL108634;
NIDDK U54 DK107981;
NSF CAREER 0747475;
NSF CAREER 1150287;
Arnold and Mabel Beckman foundation ;
Pew Charitable Trusts
PMID:26704975 THIS RESOURCE IS NO LONGER IN SERVICE SCR_016964 TOPological DOMains, Topological Domains, TopDom_v0.0.2, TopDom_v0.0.1 2026-02-15 09:21:12 10
Prevention of Lower Urinary Tract Symptoms
 
Resource Report
Resource Website
Prevention of Lower Urinary Tract Symptoms (RRID:SCR_016923) PLUS organization portal, data or information resource, consortium, portal Research consortium from many different fields to plan, perform and analyze the studies that are needed to help researchers conduct future prevention and intervention for Lower Urinary Tract Symptoms (LUTS) in women. plan, perform, analyze, data, prevent, lower, urinary, track, symptom, women is listed by: NIDDK Information Network (dkNET)
is listed by: Collaborating for the Advancement of Interdisciplinary Research in Benign Urology
is related to: University of Minnesota Medical School; Minnesota; USA
NIDDK SCR_016923 Prevention of Lower Urinary Tract Symptoms, Prevention LUTS, PLUS 2026-02-15 09:21:56 0
Kidney Precision Medicine Project
 
Resource Report
Resource Website
50+ mentions
Kidney Precision Medicine Project (RRID:SCR_016920) KPMP organization portal, portal, availability annotation standard, nif annotation standard, consortium, project portal, data or information resource, narrative resource, standard specification, the community can contribute to this resource, topical portal, disease-related portal Project to ethically obtain and evaluate human kidney biopsies from participants with Acute Kidney Injury (AKI) or Chronic Kidney Disease (CKD), create a kidney tissue atlas, define disease subgroups, and identify critical cells, pathways, and targets for novel therapies. Used to develop the next generation of software tools to visualize and understand the various components of kidney diseases and to optimize data collection. Multi site collaboration comprised of patients, clinicians, and investigators from across the United States. ethically, obtain, evaluate, human, kidney, biopsy, collaboration, patient, clinician, researcher, acute, injury, chronic, disease, tissue, atlas, cell, pathway, target, novel, therapy, data, collection is listed by: NIDDK Information Network (dkNET)
is related to: Kidney Tissue Atlas
Acute Kidney Injury, Chronic Kidney Disease NIDDK Open resource for academics, industry, and the broader scientific community SCR_016920 Kidney Precision Medicine Project, The Kidney Precision Medicine Project 2026-02-15 09:21:12 53
FunGene
 
Resource Report
Resource Website
10+ mentions
FunGene (RRID:SCR_018749) database, software resource, service resource, storage service resource, data repository, production service resource, data or information resource, analysis service resource, software toolkit Functional gene pipeline and repository. Functional gene repository provides collections of genes in interactive platform, while functional gene pipeline offers suite of tools for functional gene amplicon processing and analysis. Together they enable key steps in functional gene based microbial community analysis, from target selection and primer analysis to amplicon processing and ecological discovery. Gene processing, microbial ecology, functional genes, amplification primers, phylogeny, biogeochemical cycles, amplicon analysis, ecological discovery, microbial community has parent organization: Michigan State University; Michigan; USA NIEHS P42 ES004911;
USDA National Institute of Food and Agriculture ;
NIDDK UH3 DK083993;
Office of Science U.S. Department of Energy ;
NIEHS
PMID:24101916 Free, Freely available SCR_018749 FunGene Pipeline 2026-02-15 09:22:17 42
Diabetic Foot Consortium
 
Resource Report
Resource Website
Diabetic Foot Consortium (RRID:SCR_018914) DFC organization portal, portal, consortium, data or information resource, topical portal, disease-related portal Group of academic institutions committed to studying diabetic foot conditions, such as foot ulcers and wound healing, to develop predictive biomarkers which can be later used to create better treatment plans and improve health and quality of life for people living with diabetes. Academic institution group, diabetic, diabetic foot, diabetic foot condition, foot ulcer, wound healing, biomarker is related to: Indiana University; Indiana; USA
is related to: University of Pittsburgh; Pennsylvania; USA
is related to: University of Miami; Florida; USA
is related to: University of California at San Francisco; California; USA
is related to: Stanford University; Stanford; California
is related to: University of Michigan; Ann Arbor; USA
diabetic NIDDK SCR_018914 2026-02-15 09:22:24 0
Urinary Stone Disease Research Network
 
Resource Report
Resource Website
Urinary Stone Disease Research Network (RRID:SCR_019059) USDRN disease-related portal, topical portal, data or information resource, portal Portal for research on urinary stones in adults and children in order to learn more about who forms kidney stones, treatments and prevention. Network comprises of experts including adult and pediatric urologists, adult and pediatric nephrologists, pediatricians, emergency department physicians, clinical trialists, nutritionists, behavioral scientists, and radiologists. Duke Clinical Research Institute is Scientific Data Research Center and with clinical sites including University of Pennsylvania Children Hospital of Philadelfia, University of Texas Southwestern Medical Center, University of Washington, Washington University in St. Louis, work together in planning, executing, and analyzing results from USDRN studies. Urinary stone, kidney stone, kidney, treatment, prevention, urologist, nephrologist, pediatrician, clinical trial, data is related to: Duke University School of Medicine; North Carolina; USA
is related to: University of Pennsylvania; Philadelphia; USA
is related to: University of Texas System; Texas; USA
is related to: Washington University in St. Louis; Missouri; USA
is related to: University of Washington; Seattle; USA
Kidney stones NIH ;
NIDDK
Free, Freely available SCR_019059 2026-02-15 09:21:47 0
University of Washington Diabetes Research Center
 
Resource Report
Resource Website
1+ mentions
University of Washington Diabetes Research Center (RRID:SCR_015126) portal, service resource, data or information resource, access service resource, topical portal, disease-related portal, resource University-affiliated center to support both basic and clinical research in diabetes and related metabolic disorders with the ultimate purpose of translating findings into opportunities to prevent these diseases and to improve clinical care and outcomes. diabetes, metabolic disorder, clinical research is listed by: NIDDK Information Network (dkNET)
is affiliated with: Diabetes Research Centers
has parent organization: University of Washington; Seattle; USA
is parent organization of: University of Washington Diabetes Research Center Quantitative and Functional Proteomics Core Facility
is parent organization of: University of Washington Diabetes Research Center Vector and Transgenic Mouse Core
is parent organization of: University of Washington Diabetes Research Center Cell Function Analysis Core Facility
is parent organization of: University of Washington Diabetes Research Center Human Studies Core Facility
is parent organization of: University of Washington Diabetes Research Center Cellular and Molecular Imaging Core
is parent organization of: University of Washington Diabetes Research Center Administrative Core
has organization facet: University of Washington Diabetes Research Center Administrative Core
has organization facet: University of Washington Diabetes Research Center Cell Function Analysis Core Facility
has organization facet: University of Washington Diabetes Research Center Cellular and Molecular Imaging Core
has organization facet: University of Washington Diabetes Research Center Human Studies Core Facility
has organization facet: University of Washington Diabetes Research Center Quantitative and Functional Proteomics Core Facility
has organization facet: University of Washington Diabetes Research Center Vector and Transgenic Mouse Core
is organization facet of: Diabetes Research Centers
Diabetes NIDDK P30DK017047 Available to the research community SCR_015126 2026-02-15 09:21:09 2
Johns Hopkins University - University of Maryland Diabetes Research Center
 
Resource Report
Resource Website
Johns Hopkins University - University of Maryland Diabetes Research Center (RRID:SCR_015086) portal, service resource, data or information resource, access service resource, topical portal, disease-related portal, resource Center whose goal is to understand the causes of both type 1 and 2 diabetes and promotes translational research that is aimed at reducing the burden of these diseases in the U.S. It has a specific focus on childhood diabetes and diabetes that affects minority populations. diabetes research, child diabetes, endocrinology is listed by: NIDDK Information Network (dkNET)
has parent organization: Johns Hopkins University School of Medicine; Baltimore, Maryland; USA
has parent organization: University of Maryland; Maryland; USA
is parent organization of: Johns Hopkins University - University of Maryland Diabetes Research Center Health and Populations Science Core
is parent organization of: Johns Hopkins University - University of Maryland Diabetes Research Center Gene Editing Core
is parent organization of: Johns Hopkins University - University of Maryland Diabetes Research Center Cell Biology Core
is parent organization of: Johns Hopkins University - University of Maryland Diabetes Research Center Administrative Core
is parent organization of: Johns Hopkins University - University of Maryland Diabetes Research Center Molecular and Translational Genomics Core
has organization facet: Johns Hopkins University - University of Maryland Diabetes Research Center Administrative Core
has organization facet: Johns Hopkins University - University of Maryland Diabetes Research Center Cell Biology Core
has organization facet: Johns Hopkins University - University of Maryland Diabetes Research Center Integrated Physiology Core
has organization facet: Johns Hopkins University - University of Maryland Diabetes Research Center Gene Editing Core
has organization facet: Johns Hopkins University - University of Maryland Diabetes Research Center Molecular and Translational Genomics Core
has organization facet: Johns Hopkins University - University of Maryland Diabetes Research Center Health and Populations Science Core
is organization facet of: Diabetes Research Centers
Type 1 diabetes, Type 2 diabetes, Diabetes NIDDK P30DK079637 Available to the research community SCR_015086 2026-02-15 09:21:06 0
Harvard Digestive Disease Center
 
Resource Report
Resource Website
Harvard Digestive Disease Center (RRID:SCR_015587) HDDC organization portal, portal, data or information resource, topical portal, disease-related portal Community of scientists focused on the study of epithelial cell function and mucosal biology including inflammation and host defense of the gastrointestinal tract. It focuses on the intestinal and inflammatory bowel diseases; gut microbiology; and stem cell and developmental biology of the intestine and liver in organ physiology, regenerative medicine, and metabolism. digestive disease, inflammatory bowel disease, epithelial cell function, mucosal biology, inflammation, stem cell biology is listed by: NIDDK Information Network (dkNET)
has parent organization: Harvard University; Cambridge; United States
is parent organization of: Harvard Digestive Diseases Center Biomedical CORE B: Microscopy and Histopathology
is parent organization of: Harvard Digestive Diseases Center Biomedical CORE C: Epithelial Cell and Mucosal Immunology
is parent organization of: Harvard Digestive Diseases Center Biomedical CORE D: Gnotobiotic Mice, Microbiology and Metagenomics
is parent organization of: Harvard Digestive Diseases Center Clinical Translational Research Program
is parent organization of: Harvard Digestive Diseases Center Bio-Repository and Data Registry for Human Material
has organization facet: Harvard Digestive Diseases Center Biomedical CORE B: Microscopy and Histopathology
has organization facet: Harvard Digestive Diseases Center Biomedical CORE C: Epithelial Cell and Mucosal Immunology
has organization facet: Harvard Digestive Diseases Center Biomedical CORE D: Gnotobiotic Mice, Microbiology and Metagenomics
has organization facet: Harvard Digestive Diseases Center Clinical Translational Research Program
has organization facet: Harvard Digestive Diseases Center Bio-Repository and Data Registry for Human Material
is organization facet of: Digestive Disease Centers
digestive disease, Inflammatory Bowel Disease, NIDDK P30 DK034854 Available to the research community SCR_015587 2026-02-15 09:21:32 0
Columbia University George M. O'Brien Urology Center
 
Resource Report
Resource Website
Columbia University George M. O'Brien Urology Center (RRID:SCR_015479) portal, service resource, data or information resource, access service resource, topical portal, disease-related portal, resource Research center that brings together research programs in human genetics and mouse models to address the causes of congenital urinary tract malformations. congenital urinary tract malformation, human genetic, mouse model is listed by: NIDDK Information Network (dkNET)
is listed by: Collaborating for the Advancement of Interdisciplinary Research in Benign Urology
has parent organization: Columbia University; New York; USA
is organization facet of: O'Brien Urology Centers
urinary tract malformation NIDDK U54DK104309 Available to the research community SCR_015479 2026-02-15 09:21:30 0
MMPC-University of California Davis
 
Resource Report
Resource Website
50+ mentions
MMPC-University of California Davis (RRID:SCR_015357) portal, service resource, data or information resource, access service resource, topical portal, disease-related portal, resource Center that provides the scientific community with metabolic and physiologic phenotyping tests, services, and procedures for mouse models of diabetes, diabetic complications, obesity and related disorders in order to advance medical and biological research. mouse biology, metabolic phenotyping, mutant mouse models, MMPC is listed by: NIDDK Information Network (dkNET)
has parent organization: University of California at Davis; California; USA
has parent organization: National Mouse Metabolic Phenotyping Centers
is parent organization of: MMPC-University of California Davis Energy Balance Exercise and Behavior Core
is parent organization of: MMPC-University of California Davis Administrative Core
is parent organization of: MMPC-University of California Davis Microbiome and Host Response Core
is parent organization of: MMPC-University of California Davis Endocrinology and Metabolism Core
is parent organization of: MMPC-University of California Davis Animal Care Surgery and Pathology Core
has organization facet: MMPC-University of California Davis Administrative Core
has organization facet: MMPC-University of California Davis Animal Care Surgery and Pathology Core
has organization facet: MMPC-University of California Davis Endocrinology and Metabolism Core
has organization facet: MMPC-University of California Davis Energy Balance Exercise and Behavior Core
has organization facet: MMPC-University of California Davis Microbiome and Host Response Core
is organization facet of: National Mouse Metabolic Phenotyping Centers
NIDDK DK092993 Available to the research community SCR_015357 2026-02-15 09:20:52 75
Pennington Biomedical Research Center Nutrition and Obesity Research Center
 
Resource Report
Resource Website
1+ mentions
Pennington Biomedical Research Center Nutrition and Obesity Research Center (RRID:SCR_015438) portal, service resource, data or information resource, access service resource, topical portal, disease-related portal, resource Research center that supports clinical investigation addressing the etiology of nutritionally induced chronic diseases across the entire age span, from gestational and perinatal development through childhood and adolescence. It provides core services to promote the investigations around the theme of molecular mechanisms of nutritional programming induced by environmental factors. nutritional research center, nutritional research services, chronic nutritional disease is listed by: NIDDK Information Network (dkNET)
has parent organization: Pennington Biomedical Research Center
is parent organization of: Pennington Biomedical Research Center Nutrition and Obesity Research Center Animal Models and Phenotyping Core
is parent organization of: Pennington Biomedical Research Center Nutrition and Obesity Research Center Molecular Mechanisms Core
is parent organization of: Pennington Biomedical Research Center Nutrition and Obesity Research Center Human Phenotyping Core
has organization facet: Louisiana State University Pennington Biomedical Nutrition Obesity Research Center Core Facility
has organization facet: Pennington Biomedical Research Center Nutrition and Obesity Research Center Human Phenotyping Core
has organization facet: Pennington Biomedical Research Center Nutrition and Obesity Research Center Molecular Mechanisms Core
has organization facet: Pennington Biomedical Research Center Nutrition and Obesity Research Center Animal Models and Phenotyping Core
is organization facet of: Nutrition and Obesity Research Centers
Obesity NIDDK P30DK072476 Available to the research community, Acknowledgement requested SCR_015438 2026-02-15 09:21:16 2

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