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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
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Neuropathology of CTE and Delayed Effects of TBI: Toward In-Vivo Diagnostics Resource Report Resource Website |
Neuropathology of CTE and Delayed Effects of TBI: Toward In-Vivo Diagnostics (RRID:SCR_012951) | Neuropathology of CTE and Delayed Effects of TBI: Toward In-Vivo Diagnostics | data or information resource, topical portal, disease-related portal, research forum portal, portal | A multi-center and multi-disciplinary study designed to dramatically increase understanding of chronic traumatic encephalopathy (CTE) and other late effects of traumatic brain injury (TBI). Overlapping clinical features, postmortem pathologies and patterns of involvement exist in TBI, CTE, and Alzheimer''s disease pose challenges to accurate diagnosis. Premortem diagnosis of CTE is currently impossible. The neuropathological consequences of single mild or moderate-severe TBI and its relationship with CTE and known dementias are unclear. The proposed project will leverage extensive resources from an ongoing population-based prospective cohort study of brain aging (Adult Changes in Thought; ACT, n=2,305) which includes excellent medical, behavioral, and genetic characterization of a cohort (20% of whom have a history of mild-moderate TBI) in addition to state-of-the-art neuropathology workup upon death. Neuropathological study of TBI effects can begin immediately in the existing ACT autopsy sample (n=489, 20% with TBI exposure). Additional cohorts of TBI- exposed individuals will come from the Brain Injury Research Center at Mount Sinai (n=150 individuals with moderate-severe TBI), the University of Texas Southwestern (n=50 retired boxers with repetitive TBI exposure), and the National Football League (n=76 retired players with repetitive TBI exposure). All participants in the proposed study (ACT and other sites) will undergo uniform harmonized neurobehavioral assessment (chosen to maximize correspondence with existing large-scale TBI and dementia studies), MRI scan, and genomic analysis. Those individuals who expire during the course of the study will undergo ex-vivo neuroimaging and extensive neuropathological exam using state-of-the-art techniques (such as Histelide) designed to quantify tau and A�� in whole brain specimens. Only by examining postmortem pathology in a sample of individuals with varying levels of TBI exposure who are well characterized during life (as proposed herein) can postmortem pathology facilitate identification of in-vivo biomarkers that can act as diagnostic tools. This project represents the most systematic and scientifically rigorous effort to date to develop a more complete understanding of the long-term clinical and neuropathological sequelae of single and multiple TBI. | cognitive decline, health decline, dementia, symptom, incidence, prevalence, risk factor, causal role, multifocal tauopathy, neuropathology, neuroimaging, brain, biomarker, diagnosis, clinical | has parent organization: Icahn School of Medicine at Mount Sinai; New York; USA | Chronic traumatic encephalopathy, Traumatic brain injury, Aging | nlx_156787 | SCR_012951 | Neuropathology of CTE and Late Effects of TBI: Toward In-Vivo Diagnostics, Neuropathology of Chronic Traumatic Encephalopathy (CTE) and Late Effects of Traumatic Brain Injury (TBI): Toward In-Vivo Diagnostics | 2026-02-17 10:02:19 | 0 | |||||||
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HED Tags Resource Report Resource Website 1+ mentions |
HED Tags (RRID:SCR_014074) | HED | data or information resource, narrative resource, standard specification | Strategy guide for HED Annotation. Framework for systematically describing laboratory and real world events.HED tags are comma separated path strings. Organized in forest of groups with roots Event, Item, Sensory presentation, Attribute, Action, Participant, Experiment context, and Paradigm. Used for preparing brain imaging data for automated analysis and meta analysis. Applied to brain imaging EEG, MEG, fNIRS, multimodal mobile brain or body imaging, ECG, EMG, GSR, or behavioral data. Part of Brain Imaging Data Structure standard for brain imaging. | Data, structure, standard, EEG, brain, imaging, comma, separated, path, string, analysis, MEG, fNIRS, multimodal, ECG, EMG, GSR, behavioral, BRAIN Initiative |
is used by: NIMH Data Archive is used by: HeadIT is used by: OpenNeuro is recommended by: BRAIN Initiative has parent organization: University of California at San Diego; California; USA |
Swartz Foundation ; Army Research Laboratory Cooperative Agreement ; NIMH R01MH084819; NINDS R01 NS047293 |
PMID:27799907 | Free, Freely available | SCR_017630 | SCR_014074 | Hierarchical Event Descriptor Tags, Hierarchical Event Descriptor, HED, HED tags | 2026-02-17 10:02:05 | 7 | |||||
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KnowledgeSpace Resource Report Resource Website 1+ mentions |
KnowledgeSpace (RRID:SCR_014539) | KS | data or information resource, portal, knowledge environment resource | A community encyclopaedia that links brain research concepts with data, models and literature from around the world. It is an open project where users can participate and contribute to the global research community. | brain, neuron, neuroscience, knowledge environment, global, community | U.S. Department of Health and Human Services ; NIH Blueprint for Neuroscience Research ; NIDA contract HHSN27120080035C |
Public, The research community can contribute to this resource, Beta version | SCR_014539 | Neuroscience Knowledge Space, Knowledge Space | 2026-02-17 10:02:13 | 2 | ||||||||
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FluoRender Resource Report Resource Website 100+ mentions |
FluoRender (RRID:SCR_014303) | software application, data processing software, data analysis software, software resource, data visualization software | Interactive rendering tool for confocal microscopy data visualization. Combines rendering of multi-channel volume data and polygon mesh data, where properties of each dataset can be adjusted independently and quickly. Designed for neurobiologists, allowing them to better visualize confocal data from fluorescently-stained brains, but it is also useful for other biological samples. Features include feature tracking, 3D measurement tools, multiple render modes for multi-channel confocal data, and volume paint selection and segmentation. | rendering tool, confocal microscopy data visualization, neurobiology, fluorescent stain, brain, bio.tools |
is used by: VVD Viewer is listed by: bio.tools is listed by: Debian has parent organization: University of Utah; Utah; USA |
Free, Available for download, Freely available | biotools:fluorender | https://bio.tools/fluorender | SCR_014303 | FluoRender Visualization | 2026-02-17 10:02:09 | 127 | |||||||
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MultiXplore Resource Report Resource Website 1+ mentions |
MultiXplore (RRID:SCR_014814) | data analysis software, software application, data processing software, software resource | Graphical user interface that has been implemented as a 3D Slicer plugin (scripted module). It serves to display a corresponding set of cortical regions from functional connectivity matrix in an explorable 3D scene that represents brain anatomical environment. In addition to grey matter regions, MultiXplore automatically finds and extracts deterministic fiber bundles which exist between selected region(s) and adds them to the 3D environment. This feature helps in generating region-based fiber bundles given a desired whole-brain tractography data. | gui, graphical user interface, cortical region, functional connectivity matrix, 3d, brain, grey matter, fiber bundle |
is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) has parent organization: Western University; Ontario; Canada is a plug in for: 3D Slicer |
NSERC | Available for download | SCR_014814 | 2026-02-17 10:02:44 | 1 | |||||||||
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Automatic Tractography-based Parcellation Pipeline Resource Report Resource Website 1+ mentions |
Automatic Tractography-based Parcellation Pipeline (RRID:SCR_014815) | ATPP | software application, data processing software, software resource, workflow software | Integrated pipeline for tractography-based brain parcellation with automatic processing and massive parallel computing. ATPP offers a CLI version for parcellating multiple brain regions and a GUI version for parcellating a specific brain region. " ATPP completely follows the scientific cultural shift to open science, which aims at making scientific research including journal papers, lab notes, data, and, of course, workflow tools, accessible and transparent to all levels of society. ATPP is publicly accessible in Neuroimaging Informatics Tools and Resources Clearinghouse8 (NITRC) (https://www.nitrc.org/projects/atpp). Its source codes are hosted in GitHub9 (https://github.com/haililihai/ATPP_CLI; https://github.com/haililihai/ATPP_GUI), under the GNU generic purpose license version 310 (GPLv3), and are welcome to download and fork. The Digital Object Identifiers (DOIs) providing a persistent way to make digital data easily and uniquely citable was created from Zenodo11 platform with those GitHub repositories (ATPP CLI v2.0.0, doi: https://doi.org/10.5281/zenodo.239702; ATPP GUI v2.0.0, doi: https://doi.org/10.5281/zenodo.239705). " | pipeline, integrated pipeline, tractography, brain, parcel, gui, workflow |
is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) has parent organization: Chinese Academy of Sciences; Beijing; China |
National Natural Science Foundation of China10.13039/501100001809 911323013162010390581501179 | Available for download | https://doi.org/10.5281/zenodo.239705, https://doi.org/10.5281/zenodo.239702 | https://github.com/haililihai/ATPP_CLI https://github.com/haililihai/ATPP_GUI |
SCR_014815 | Automatic Tractography-based Parcellation Pipeline (ATPP) | 2026-02-17 10:02:55 | 2 | |||||
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linkRbrain Resource Report Resource Website |
linkRbrain (RRID:SCR_014562) | data management software, software application, web application, software resource | An online tool for managing and viewing datasets. Data can be viewed in 2D or 3D with activation points as points clouds or projections on the cortex surface. Data can be imported as a NIfTI file or a list of activation peaks and results can be exported as a PDF file. | web application, data management software, brain, human, 2d, 3d, activation point, cortex surface | Public, Free | SCR_014562 | LinkRBrain, linkRbrain: online tool for neuroscience | 2026-02-17 10:02:38 | 0 | ||||||||||
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GingerALE Resource Report Resource Website 100+ mentions |
GingerALE (RRID:SCR_014921) | software application, data processing software, algorithm resource, data analysis software, software resource | Software available from brainmap.org to perform meta-analyses via the activation likelihood estimation (ALE) method. It also includes the transforms for icbm2tal conversions. | mri, brain, meta analysis, estimation, icbm2tal, conversion, software, coordinate, algorithm | has parent organization: brainmap.org | PMID:19172646 | Available for download | SCR_014921 | 2026-02-17 10:02:58 | 491 | |||||||||
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Marmoset Brain Connectivity Atlas Resource Report Resource Website 10+ mentions |
Marmoset Brain Connectivity Atlas (RRID:SCR_015964) | storage service resource, data or information resource, atlas, database, service resource, data repository | Brain connectivity atlas to create systematic, digital repository for data on connections between different cortical areas, in primate species. Data repository for connections between different cortical areas in marmoset monkeys. Allows access to data set and enables other interpretations of data, in light of future evolution of knowledge about marmoset cortex. | cortex, marmoset, monkey, cerebral, brain, architecture, primate |
has parent organization: Monash University; Melbourne; Australia has parent organization: Nencki Institute of Experimental Biology; Warsaw; Poland works with: Nencki-Monash template |
Australian Research Council DP140101968; Australian Research Council CE140100007; European Regional Development Fund ; NIDA R01 DA036400; NIMH R01 MH087988; International Neuroinformatics Coordinating Facility |
DOI:10.1038/s41467-020-14858-0 PMID:27099164 |
Free, Freely available | http://marmoset.braincircuits.org, http://analysis.marmosetbrain.org | SCR_015964 | Marmoset Monkey Cerebral Cortex Connectivity Atlas | 2026-02-17 10:02:38 | 26 | ||||||
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Human Nervous System Neuroanatomy Resource Report Resource Website |
Human Nervous System Neuroanatomy (RRID:SCR_006371) | Human Nervous System Neuroanatomy | data or information resource, image collection, data set | Data set of images of the human nervous system focusing on neuroanatomy. | central nervous system, neuroanatomy, brain, cerebellum, cranial nerve, hypothalamus, medulla, midbrain, muscle, nerve, pineal, pons, skull, spinal cord, thalamus, vein | is related to: Human Nervous System Disease and Injury | nlx_152124 | SCR_006371 | Human Nervous System - Neuroanatomy | 2026-02-17 10:00:51 | 0 | ||||||||
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HUDSEN Human Gene Expression Spatial Database Resource Report Resource Website |
HUDSEN Human Gene Expression Spatial Database (RRID:SCR_006325) | HUDSEN Database | storage service resource, data or information resource, atlas, database, service resource, data repository | Database of a set of standard 3D virtual models at different stages of development from Carnegie Stages (CS) 12-23 (approximately 26-56 days post conception) in which various anatomical regions have been defined with a set of anatomical terms at various stages of development (known as an ontology). Experimental data is captured and converted to digital format and then mapped to the appropriate 3D model. The ontology is used to define sites of gene expression using a set of standard descriptions and to link the expression data to an ''''anatomical tree''''. Human data from stages CS12 to CS23 can be submitted to the HUDSEN Gene Expression Database. The anatomy ontology currently being used is based on the Edinburgh Human Developmental Anatomy Database which encompasses all developing structures from CS1 to CS20 but is not detailed for developing brain structures. The ontology is being extended and refined (by Prof Luis Puelles, University of Murcia, Spain) and will be incorporated into the HUDSEN database as it is developed. Expression data is annotated using two methods to denote sites of expression in the embryo: spatial annotation and text annotation. Additionally, many aspects of the detection reagent and specimen are also annotated during this process (assignment of IDs, nucleotide sequences for probes etc). There are currently two main ways to search HUDSEN - using a gene/protein name or a named anatomical structure as the query term. The entire contents of the database can be browsed using the data browser. Results may be saved. The data in HUDSEN is generated from both from researchers within the HUDSEN project, and from the wider scientific community. The HUDSEN human gene expression spatial database is a collaboration between the Institute of Human Genetics in Newcastle, UK, and the MRC Human Genetics Unit in Edinburgh, UK, and was developed as part of the Electronic Atlas of the Developing Human Brain (EADHB) project (funded by the NIH Human Brain Project). The database is based on the Edinburgh Mouse Atlas gene expression database (EMAGE), and is designed to be an openly available resource to the research community holding gene expression patterns during early human development. | embryonic human, anatomy, developmental stage, development, brain, gene expression, optical projection tomography, carnegie stage, in situ hybridization, immunohistochemistry, gene, ontology, anatomical structure, protein expression, embryonic development, annotation, embryo |
is related to: EMAGE Gene Expression Database is related to: Human Developmental Biology Resource has parent organization: HUDSEN |
NIMH 5RO1MH070370; EU FP6 Research Infrastructure Action Structuring the European Research Area Programme contract 011993; Spanish Ministry of Science and Innovation BFU2008-04156; SENECA Foundation contract 04548 �GERM �06-10891 |
PMID:20979583 | Open unspecified license, Acknowledgement requested | nlx_152026 | SCR_006325 | HUDSEN Gene Expression Database | 2026-02-17 10:00:54 | 0 | |||||
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Mouse Party Resource Report Resource Website |
Mouse Party (RRID:SCR_006438) | Mouse Party | narrative resource, video resource, data or information resource, training material | Mouse Party is an interactive website that teaches how various drugs disrupt the synapse by taking a look inside the brains of mice on drugs! Every drug of abuse has its own unique molecular mechanism. Where applicable, this presentation primarily depicts how drugs interact with dopamine neurotransmitters because this website focuses on the brain''s reward pathway. Mouse Party is designed to provide a small glimpse into the chemical interactions at the synaptic level that cause the drug user to feel ''high''. The simplified mechanisms of drug action presented here are just a small part of the story. When drugs enter the body they elicit very complex effects in many different regions of the brain. Often they interact with many different types of neurotransmitters and may bind with a variety of receptor types in a variety of different locations. For example, THC in marijuana can bind with cannabinoid receptors located on the presynaptic and/or postsynaptic cell in a synapse. | drug of abuse, ecstasy, mdma, excitatory neurotransmitter, gaba, gaba-gated anionic channel, alcohol, anandamide, brain, cannabinoid, cannabinoid receptor, cocaine, dopamine, dopamine receptor, dopamine transporter, glutamate, glutamate receptor, heroin, inhibitory neurotransmitter, locus ceruleus, lsd, marijuana, methamphetamine, neurotransmitter, neurotransmitter receptor, neurotransmitter secretion, neurotransmitter transport, neurotransmitter uptake, reward pathway, serotonin, serotonin receptor, serotonin transport, serotonin transporter, synapse, synaptic cleft, tetrahydrocannabinol | has parent organization: University of Utah; Utah; USA | nif-0000-00429 | SCR_006438 | 2026-02-17 10:01:04 | 0 | |||||||||
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Functional Connectivity Toolbox Resource Report Resource Website 100+ mentions |
Functional Connectivity Toolbox (RRID:SCR_006394) | Functional Connectivity Toolbox | software application, data processing software, data analysis software, software resource, software toolkit | MATLAB toolbox for performing functional connectivity analyses includes many of the most commonly-used approaches researchers have utilized to date for the identification of condition-dependent functional interactions between fMRI time-series obtained from two or more brain regions. The approaches are either bivariate or multivariate methods defined in time or frequency domains that emphasize distinct features of relationships among the time-series. | functional connectivity, fmri, matlab, brain region, brain, function, connectivity, neuroimaging, time-series | has parent organization: University of Pittsburgh; Pennsylvania; USA | NIMH K25 MH076981-01; NSF DMS-0904825; NIMH MH074807; NIMH MH082998 |
PMID:19520177 | Free | nlx_152228 | SCR_006394 | 2026-02-17 10:01:03 | 239 | ||||||
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BrainSuite Resource Report Resource Website 50+ mentions |
BrainSuite (RRID:SCR_006623) | BrainSuite | software application, data processing software, software resource, image analysis software, data visualization software | Suite of image analysis tools designed to process magnetic resonance images (MRI) of the human head. BrainSuite provides an automatic sequence to extract genus-zero cortical surface mesh models from the MRI. It also provides a set of viewing tools for exploring image and surface data. The latest release includes graphical user interface and command line versions of the tools. BrainSuite was specifically designed to guide its users through the process of cortical surface extraction. NITRC has written the software to require minimal user interaction and with the goal of completing the entire process of extracting a topologically spherical cortical surface from a raw MR volume within several minutes on a modern workstation. The individual components of BrainSuite may also be used for soft tissue, skull and scalp segmentation and for surface analysis and visualization. BrainSuite was written in Microsoft Visual C using the Microsoft Foundation Classes for its graphical user interface and the OpenGL library for rendering. BrainSuite runs under the Windows 2000 and Windows XP Professional operating systems. BrainSuite features include: * Sophisticated visualization tools, such as MRI visualization in 3 orthogonal views (either separately or in 3D view), and overlayed surface visualization of cortex, skull, and scalp * Cortical surface extraction, using a multi-stage user friendly approach. * Tools including brain surface extraction, bias field correction, voxel classification, cerebellum removal, and surface generation * Topological correction of cortical surfaces, which uses a graph-based approach to remove topological defects (handles and holes) and ensure a tessellation with spherical topology * Parameterization of generated cortical surfaces, minimizing a harmonic energy functional in the p-norm * Skull and scalp surface extraction | brain, magnetic resonance, image, analysis, human, topology, segmentation, visualization, cortex, cortical, mri, tissue classification, topological correction, rendering, edit, cortical surface |
is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) has parent organization: Biomedical Informatics Research Network |
NIBIB R01 EB002010; NCRR P41 RR013642; NIMH RO1-MH53213 |
PMID:12045000 | nif-0000-30214 | http://www.nitrc.org/projects/brainsuite | SCR_006623 | Brain Suite | 2026-02-17 10:01:06 | 93 | |||||
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Louisiana State University School of Medicine, Health Sciences Center: Epilepsy Center Resource Report Resource Website |
Louisiana State University School of Medicine, Health Sciences Center: Epilepsy Center (RRID:SCR_006519) | LSU Epilepsy Center | data or information resource, topical portal, disease-related portal, training resource, portal, medical school program resource, degree granting program | The LSU Epilepsy Center of Excellence is dedicated to providing state-of-the-art, comprehensive epilepsy treatment, enhancing access to epilepsy education for patients and physicians, and promoting multidisciplinary epilepsy research in pharmacology, neuroelectrophysiology, neuroimaging, neurosurgery, neuropsychology, biomedical engineering and public health. The center''s team of professionals offers diagnostic and presurgical monitoring, the strategic use of antiepileptic medications, specialized epilepsy neuroimaging, vagus nerve stimulator implantation, ketogenic diet management, neuropsychological testing, psychiatric support and epilepsy surgery for adults and children. The Center also hosts several clinical research trials each year for investigational medications and devices. The following are the treatment methods currently available at this center: - Epilepsy Brain Implants - Responsive Neurostimulator (RNS) - Medications - Medication blood level monitoring - Vagus Nerve Stimulators (VNS) - Epilepsy Surgery - Ketogenic Diet - Psychiatric Services - Radiosurgery Epilepsy Center Sections: *Electrophysiology *Neuroimaging *Neuropsychology *Neuroscience *Neurosurgery *Pharmacology *Psychiatry *Research | education, engineering, epilepsy, adult, antiepileptic, biomedical, blood, brain, child, clinical, diagnostic, health, implantation, ketogenic, medication, neuroelectrophysiology, neuropsychological, neuropsychology, neurosurgery, patient, pharmacology, physician, presurgical, psychiatric, public, radiosurgery, surgery, treatment, vagus nerve, neuroimaging | has parent organization: Louisiana State University School of Medicine; Louisiana; USA | nif-0000-10284 | SCR_006519 | LSU Epilepsy Center of Excellence, LSUHSC School of Medicine at New Orleans; Epilepsy Center, LSUHSC School of Medicine; Epilepsy Center, LSU Health Sciences Center School of Medicine at New Orleans; Epilepsy Center | 2026-02-17 10:01:04 | 0 | ||||||||
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MITRE Neuroinformatics Resource Report Resource Website |
MITRE Neuroinformatics (RRID:SCR_006508) | MITRE Neuroinfomatics | software application, data transfer software, data processing software, data distribution software, data analysis software, software resource, simulation software, data visualization software | This resource''s long-term goal is to develop informatics methodologies and tools that will increase the creativity and productivity of neuroscience investigators, as they work together to use shared human brain mapping data to generate and test ideas far beyond those pursued by the data''s originators. This resource currently has four major projects supporting this goal: * Database tools: The goal of the NeuroServ project is to provide neuroscience researchers with automated information management tools that reduce the effort required to manage, analyze, query, view, and share their imaging data. It currently manages both structural magnetic resonance image (MRI) datasets and diffusion tensor image (DTI) datasets. NeuroServ is fully web-enabled: data entry, query, processing, reporting, and administrative functions are performed by qualified users through a web browser. It can be used as a local laboratory repository, to share data on the web, or to support a large distributed consortium. NeuroServ is based on an industrial-quality query middleware engine MRALD. NeuroServ includes a specialized neuroimaging schema and over 40 custom Java Server Pages supporting data entry, query, and reporting to help manage and explore stored images. NeuroServ is written in Java for platform independence; it also utilizes several open source components * Data sharing: DataQuest is a collaborative forum to facilitate the sharing of neuroimaging data within the neuroscience community. By publishing summaries of existing datasets, DataQuest enables researchers to: # Discover what data is available for collaborative research # Advertise your data to other researchers for potential collaborations # Discover which researchers may have the data you need # Discover which researchers are interested in your data. * Image quality: The approach to assessing the inherent quality of an image is to measure how distorted the image is. Using what are referred to as no-reference or blind metrics, one can measure the degree to which an image is distorted. * Content-based image retrieval: NIRV (NeuroImagery Retrieval & Visualization) is a work environment for advanced querying over imagery. NIRV will have a Java-based front-end for users to issue queries, run processing algorithms, review results, visualize imagery and assess image quality. NIRV interacts with an image repository such as NeuroServ. Users can also register images and will soon be able to filter searches based on image quality. | brain, data, diffusion tensor image, distorted, human, imagery, image, informatics, investigator, laboratory, magnetic resonance image, mapping, neuroscience, structural, visualization, neuroimaging | Human Brain Project ; MITRE Technology Program ; NSF ; NIMH R01-MH64417 |
nif-0000-10469 | http://neuroinformatics.mitre.org/ | SCR_006508 | Neuroinfomatics at MITRE, Neuroinformatics: Exploring the Human Brain | 2026-02-17 10:00:53 | 0 | |||||||
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Blox Resource Report Resource Website 1+ mentions |
Blox (RRID:SCR_006667) | Blox | software application, data processing software, software resource, image analysis software, data visualization software | A quantitative medical imaging and visualization program for use on brain MR, DTI, and MRS data. Programming Language: Java, JavaScript, Scheme | magnetic resonance imaging, diffusion tensor imaging, magnetic resonance spectroscopy, 3d visualization, brain, 3d rendering, neuroimaging, registration, segmentation, visualization, volume |
is listed by: Biositemaps has parent organization: SourceForge has parent organization: Kennedy Krieger Institute has parent organization: Johns Hopkins University; Maryland; USA |
GNU General Public License | nif-0000-00270 | http://pni.med.jhu.edu/blox/ | SCR_006667 | 2026-02-17 10:00:56 | 5 | |||||||
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Brain Innovation: Home of the BrainVoyager Product Family Resource Report Resource Website 100+ mentions |
Brain Innovation: Home of the BrainVoyager Product Family (RRID:SCR_006660) | Brain Innovation | data or information resource, topical portal, portal, software resource | Brain Innovation B.V. is developing scientific software in the field of human and animal brain imaging, neural network simulation and computer-based experimental control. Our current major product, BrainVoyager QX, is a commercially available cross-platform neuroimaging tool, which is used in hundreds of labs across the planet. Turbo-BrainVoyager is an easy to use program for real-time data analysis, which allows to observe a subject''s or patient''s brain activity during an ongoing functional MRI scanning session. TMS Neuronavigator provides the hard- and software to navigate a TMS coil to desired anatomical or functionally defined brain regions. We also provide free software products. BrainVoyager Brain Tutor allows to learn about brain areas by clicking on rotatable 3D brain models. StimulDX is a powerful stimulation software based on Microsofts DirectX API, which we will make available for free download in the near future. | brain, imaging, human, non-human animal, brain imaging, neural network simulation, experimental control, network, simulation, experimental, analysis, anatomical, neuroimaging, tool |
is parent organization of: BrainVoyager Brain Tutor is parent organization of: BrainVoyager Brain Viewer is parent organization of: Turbo-BrainVoyager is parent organization of: BrainVoyager |
nif-0000-30213 | SCR_006660 | Brain Innovation B.V. | 2026-02-17 10:00:58 | 168 | ||||||||
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BrainVoyager Brain Tutor Resource Report Resource Website 1+ mentions |
BrainVoyager Brain Tutor (RRID:SCR_006737) | BV Brain Tutor | narrative resource, software application, data or information resource, training material, software resource | A free award-winning educational program that teaches you knowledge about the human brain through interactive exploration of rotatable 3D models. The models have been computed with BrainVoyager QX using original data from magnetic resonance imaging (MRI) scans. Besides having fun with the rotatable 3D models, the program contains information about the major lobes, gyri, sulci and Brodmann areas of the cerebral cortex. The program runs on Windows XP, Vista and Windows 7. | atlas, brain, cerebral cortex, lobe of cerebral cortex, brodmann partition scheme region, functional area, human, magnetic resonance imaging assay, mri, 3d model, c++, macos, microsoft, magnetic resonance, software, win32 (ms windows), windows |
is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) is related to: BrainVoyager has parent organization: Brain Innovation: Home of the BrainVoyager Product Family |
Free | nlx_144322 | http://www.nitrc.org/projects/bvbraintutor http://www.brainvoyager.com/BrainTutor.html |
SCR_006737 | 2026-02-17 10:01:06 | 2 | |||||||
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SIU CADRD Dementia Brain Autopsy Program Resource Report Resource Website |
SIU CADRD Dementia Brain Autopsy Program (RRID:SCR_006918) | biomaterial supply resource, tissue bank, brain bank, material resource | A brain autopsy program developed to serve the needs of Illinois families and individuals affected by dementing diseases and to advance dementia research by providing tissue to researchers studying dementing diseases. The SIU School of Medicine (SIU-SM) Dementia Brain Autopsy Program facilitates the postmortem process for families wishing to obtain an autopsy for a loved one. A brain autopsy provides family members with accurate information regarding the exact nature of their relative's dementia. This includes information about the possibility of an inherited disorder which may affect other family members. The brain autopsy also helps clinicians improve their clinical skills by identifying the precise cause of the clinical dementia. | post mortem, autopsy, brain tissue, brain, tissue, dementia, dementing disease, alzheimer's disease |
is listed by: One Mind Biospecimen Bank Listing has parent organization: SIU Center for Alzheimer's Disease and Related Disorders |
Dementia, Dementing disease, Alzheimer's disease | The Dementia Brain Autopsy Program is on hold due to lack of funding, Check back periodically to see if the program has been re-instituted, Available to the research community | nlx_144049 | SCR_006918 | Dementia Brain Autopsy Program, SIU-SM Dementia Brain Autopsy Program, SIU School of Medicine Dementia Brain Autopsy Program, SIU Dementia Brain Autopsy Program | 2026-02-17 10:01:10 | 0 |
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