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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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flyPAD project Resource Report Resource Website |
flyPAD project (RRID:SCR_021449) | instrument resource, data or information resource, project portal, portal | Project related to analysis of behavior and of neural activity. Provides FPGA code for running main board of flyPAD. | FPGA code, running main board of flyPAD, VHDL, Quartus 2, OpenBehavior, Instrument |
is listed by: OpenBehavior is related to: flyPAD |
DOI:10.1038/ncomms5560 | Free, Freely available | SCR_021449 | flyPAD | 2026-02-16 09:50:02 | 0 | ||||||||
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Automated Home-Cage Functional Imaging project Resource Report Resource Website |
Automated Home-Cage Functional Imaging project (RRID:SCR_021567) | instrument resource, data or information resource, project portal, portal | Portal provides automated system for mesoscopic functional imaging that allows subjects to self initiate head fixation and imaging within home cage. Developed by University of British Columbia scientists. System for automated head fixation within mouse home cages. | Instrument, mesoscopic functional imaging, self initiate head fixation, imaging within home cage, OpenBehavior |
is listed by: OpenBehavior is related to: Automated Home-Cage Functional Imaging has parent organization: University of British Columbia; British Columbia; Canada |
DOI:10.1038/ncomms11611 | Free, Freely available | SCR_021567 | Automated Home-Cage Functional Imaging system | 2026-02-16 09:50:05 | 0 | ||||||||
|
Touchscreen Cognition Resource Report Resource Website |
Touchscreen Cognition (RRID:SCR_021550) | instrument resource, data or information resource, project portal, portal | Project related to cognitive testing method for rodents.Provides touchscreen operant platform for testing learning and memory in rats and mice.Includes device chambers that can be used to measure rodent behavior.Not open source device. | Cognitive testing, rodent, touchscreen operant platform, learning testing, memory testing, rat, mice, device chamber, measure rodent behavior, OpenBehavior | is listed by: OpenBehavior | Free, Freely available | SCR_021550 | 2026-02-16 09:50:04 | 0 | ||||||||||
|
ACRoBaT Resource Report Resource Website |
ACRoBaT (RRID:SCR_021546) | instrument resource, data or information resource, project portal, portal | Project related to studying motor behavior. University of Washington in Seattle scientists have developed and published their device for training rats to perform modified center out task. | Instrument, automated device, training rats, perform modified center out task, OpenBehavior |
is listed by: OpenBehavior has parent organization: University of Washington; Seattle; USA |
DOI:10.1016/j.bbr.2017.11.031 | Free, Freely available | SCR_021546 | Automated Center out Rodent Behavioral Trainer | 2026-02-16 09:50:04 | 0 | ||||||||
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Visual stimulator with customizable light spectra Resource Report Resource Website |
Visual stimulator with customizable light spectra (RRID:SCR_021545) | instrument resource, data or information resource, project portal, portal | Project related to visual neuroscience.Provides spatial visual stimulator with arbitrary spectrum of light for visual neuroscientists.Open source, low cost visual stimulator which can be customized with up to 6 chromatic channels. Spectrum of light can be arbitrary and customizable to be adapted to different animal models based on their visual spectrum. Device details, including parts list and information for custom python library for generating visual stimuli (QDSpy), can be found in eLife publication. | Instrument, Visual stimulator, spatial visual stimulator, spectrum of light, visual neuroscience, OpenBehavior | is listed by: OpenBehavior | DOI:10.7554/elife.48779 | Commercially available | SCR_021545 | 2026-02-16 09:50:04 | 0 | |||||||||
|
OpenVape project Resource Report Resource Website 1+ mentions |
OpenVape project (RRID:SCR_021485) | instrument resource, data or information resource, project portal, portal | Project related to conducting research on effects of nicotine vapor. Provides open source chamber system for rodents to experience regulated nicotine vapor exposure from JUUL electronic cigarette.Vapor exposure apparatus comprised of Arduino Uno microcontroller that relays coded instructions to H-bridge motor controller.H-bridge then sends specific signals to motors that regulate produced vapor sent to exposure chambers. | Regulated nicotine vapor exposure, JUUL electronic cigarette, vapor exposure apparatus, Arduino Uno microcontroller, H-bridge motor controller, exposure chamber, rodent nicotine exposure, OpenBehavior, Instrument |
is listed by: OpenBehavior has parent organization: University of Guelph; Ontario; Canada |
DOI:10.1523/eneuro.0279-20.2020 | Free, Available for download, Freely available | https://www.khokharlab.com/open-source-file-downloads | SCR_021485 | OpenVape | 2026-02-16 09:50:03 | 1 | |||||||
|
An open source motorized swivel for in vivo neural and behavioral recordings project Resource Report Resource Website |
An open source motorized swivel for in vivo neural and behavioral recordings project (RRID:SCR_021482) | instrument resource, data or information resource, project portal, portal | Project related to neural recordings such as electrophysiology, calcium imaging, and optogenetics. Provides 3D-printed, motorized commutator for neural recordings of small animals in vivo.Open source motorized swivel for in vivo neural and behavioral recordings.Device operates independently of data acquisition system, and it can be controlled through any popular platform such as Arduino or Raspberry Pi. | Motorized commutator, neural recordings, small animals in vivo recording, motorized swivel, behavioral recordings, OpenBehavior, Instrument | is listed by: OpenBehavior | DOI:10.1016/j.mex.2020.101167 | Free, Freely available | SCR_021482 | An open source motorized swivel for in vivo neural and behavioral recordings | 2026-02-16 09:50:04 | 0 | ||||||||
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Pyper Resource Report Resource Website 1+ mentions |
Pyper (RRID:SCR_021511) | data processing software, software application, software resource, image processing software | Software tool for motion tracking.Provides real time or pre recorded motion tracking of specimen in open field. Used to track path of object of interest in live feed from camera or recorded video. Used to track rodents in open field maze as well as retina of mice.New version v2 of Pyper allows to customise image processing to track different kind of objects. | Motion tracking, open field, track path of object, live feed from camera, live feed recorded video, track rodents, open field maze, OpenBehavior |
is listed by: OpenBehavior is related to: Pyper project |
Free, Available for download, Freely Available | https://edspace.american.edu/openbehavior/project/pyper/ | SCR_021511 | Pyper v2 | 2026-02-16 09:50:03 | 2 | ||||||||
|
LinCoM Resource Report Resource Website |
LinCoM (RRID:SCR_021519) | software application, data processing software, software toolkit, data analysis software, software resource | Software MATLAB package for linearization of place fields in complex mazes.Graph theoretic approach for production of linear place fields in complex mazes. Used for producing linear place fields for hippocampal cells during behavior in complex mazes.Specifically designed to deal with mazes with one or more decision points (e.g., T-maze, W-maze, double T-maze, radial maze, plus maze, etc). | Place fields linearization, complex mazes, producing linear place fields, hippocampal cells, complex mazes behavior, OpenBehavior |
is listed by: OpenBehavior is related to: LinCoM project |
DOI:10.1101/2020.08.17.253849 | Free, Available for download, Freely Available | https://edspace.american.edu/openbehavior/project/lincom/ | SCR_021519 | Linear place fields in Complex Mazes | 2026-02-16 09:50:03 | 0 | |||||||
|
ezTrack Resource Report Resource Website 10+ mentions |
ezTrack (RRID:SCR_021496) | software application, data processing software, software toolkit, data analysis software, software resource | Open source video analysis pipeline for investigation of animal behavior. Platform independent set of behavior analysis pipelines using interactive Python ( (iPython/Jupyter Notebook) that researchers with no prior programming experience can use. | Track animal location, track motion, track animal freezing, OpenBehavior |
is listed by: OpenBehavior is related to: ezTrack project |
DOI:10.1038/s41598-019-56408-9 | Free, Available for download, Freely Available | https://edspace.american.edu/openbehavior/project/eztrack/ | SCR_021496 | 2026-02-16 09:50:03 | 10 | ||||||||
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Precision Syringe Pump Controller project Resource Report Resource Website |
Precision Syringe Pump Controller project (RRID:SCR_021493) | instrument resource, data or information resource, project portal, portal | Project related to dispensing precise volumes of fluid over precise timescales.System components include syringe holder and control board with syringe pump controller and programming library.Syringe pump controller was developed by American University scientists. | Syringe pump controller, dispensing precise fluid volumes, fluid over precise timescales, syringe holder, control board with syringe pump controller and programming library, OpenBehavior, Instrument |
is listed by: OpenBehavior has parent organization: American University; Washington D.C.; USA |
DOI:10.1523/eneuro.0240-19.2019 | Free, Freely available | SCR_021493 | Precision Syringe Pump Controller | 2026-02-16 09:50:03 | 0 | ||||||||
|
Pi Virtual Reality System project Resource Report Resource Website |
Pi Virtual Reality System project (RRID:SCR_021490) | PiVR | instrument resource, data or information resource, project portal, portal | Project related to study of orientation behavior and neural circuit functions, through creation and analysis of small, freely moving animals in virtual realities. Provides virtual reality tool system for behavioral and neural circuit studies of small animals.Closed loop platform to study unrestrained sensorimotor behavior. | Virtual reality, behavioral and neural circuit, small animal, closed loop platform, unrestrained sensorimotor behavior, OpenBehavior, Instrument | is listed by: OpenBehavior | DOI:10.1371/journal.pbio.3000712 | Free, Freely available | SCR_021490 | Pi Virtual Reality System | 2026-02-16 09:50:04 | 0 | |||||||
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Pypreclin Resource Report Resource Website 1+ mentions |
Pypreclin (RRID:SCR_021526) | data processing software, software application, software resource, image processing software | Software Python tool to processes raw macaque fMRI images using algorithms embedded in automatic pipeline. | Raw macaque fMRI images, fMRI images, macaque images, Python, OpenBehavior |
is listed by: OpenBehavior is related to: Pypreclin project |
DOI:10.1016/j.neuroimage.2019.116353 | Free, Available for download, Freely Available | https://edspace.american.edu/openbehavior/project/pypreclin/ | SCR_021526 | 2026-02-16 09:50:03 | 5 | ||||||||
|
Oculomatic Resource Report Resource Website |
Oculomatic (RRID:SCR_021525) | data acquisition software, software application, data processing software, software resource | Software tool for high speed eye tracking for Point Gray USB3.0 cameras.Oculomatic software tracks eye position within acquired image frame at frame rate dictated by image sensor. | High speed eye tracking, Point Gray USB3.0 camera, Oculomatic Eye Tracking system, track eye movements, OpenBehavior |
is listed by: OpenBehavior is related to: Oculomatic Eye Tracking project |
DOI:10.1016/j.jneumeth.2016.06.016 | Free, Available for download, Freely Available | https://edspace.american.edu/openbehavior/project/oculomatic-eye-tracking/ | SCR_021525 | Oculomatic eye tracking | 2026-02-16 09:50:03 | 0 | |||||||
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Open-tES project Resource Report Resource Website |
Open-tES project (RRID:SCR_021487) | instrument resource, data or information resource, project portal, portal | Project is related to transcranial Electrical Stimulation.Included system contains aluminum box stimulator with banana connectors for both anode and cathode on front panel,power supply on rear, power switch and serial port, LCD screen and three buttons on top panel that are used to input settings for stimulator. Device for delivering non-invasive neuromodulation techniques such as transcranial direct current stimulation. If device is used for certain types of tDCS (otDCS and tPCs) or external triggering, computer control must be used. Microcontroller is used to regulate operating speed and pulse width modulation switching frequency administrated by device. | Stimulation system, non-invasive neuromodulation techniques delivery, transcranial direct current stimulation, stimulator, OpenBehavior, Instrument | is listed by: OpenBehavior | DOI:10.1371/journal.pone.0236061 | Free, Freely available | SCR_021487 | Open-tES | 2026-02-16 09:50:02 | 0 | ||||||||
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Wave Surfer Resource Report Resource Website 10+ mentions |
Wave Surfer (RRID:SCR_021529) | software application, data processing software, data analysis software, software resource, data acquisition software | Open source software application for neurophysiology data acquisition and analysis. Program is based in MatLab, and evolved from earlier open source software package called Ephus. | neurophysiology data acquisition, neurophysiology data analysis, neurophysiology data, MATLAB, OpenBehavior |
is listed by: OpenBehavior is related to: Wave Surfer project |
Free, Available for download, Freely Available | https://edspace.american.edu/openbehavior/project/wave-surfer/ | SCR_021529 | 2026-02-16 09:50:05 | 46 | |||||||||
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Camera Control Resource Report Resource Website |
Camera Control (RRID:SCR_021614) | software resource, software toolkit | Open source software package that allows video to be recorded in sync with behavior. Python GUI and scripts allows investigators to record from multiple imaging source camera feeds with associated timestamps for each frame. Python API to record video system timestamps from Imaging Source USB cameras. Package requires Windows 10, Anaconda, and Git, and is compatible with Imaging Source USB3 cameras. Part of Camera Control project. | Multiple imaging, source camera feeds, , record video system timestamps, Imaging Source USB cameras, OpenBehavior |
is listed by: OpenBehavior is related to: Camera Control project |
Free, Available for download, Freely Available | https://edspace.american.edu/openbehavior/project/camera-control/ | SCR_021614 | Camera_Control | 2026-02-16 09:50:07 | 0 | ||||||||
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AutomaticSleepScoringTool Resource Report Resource Website |
AutomaticSleepScoringTool (RRID:SCR_022300) | software resource, software toolkit | Software pipeline for sleep researchers to perform automatic sleep scoring for rodents. Artificial neural network for automated behavioral state classification in rats. | Artificial neural network, classifying behavioral states in rats, automatic sleep scoring, rat, electrophysiological readings, OpenBehavior | is listed by: OpenBehavior | DOI:10.7717/peerj.12127 | Free, Available for download, Freely available | https://edspace.american.edu/openbehavior/project/automaticsleepscoringtool/ | SCR_022300 | 2026-02-16 09:50:13 | 0 | ||||||||
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Dual Port Lick Detector Resource Report Resource Website |
Dual Port Lick Detector (RRID:SCR_021521) | software resource, software toolkit | Distribution package for Dual Port Lick Detector.Package includes files relevant to building lick detector. | Building lick detector files, lick detector, OpenBehavior |
is listed by: OpenBehavior is related to: Dual port Lick Detector project |
DOI:10.1152/jn.00500.2018 | Free, Available for download, Freely Available | https://edspace.american.edu/openbehavior/project/dual-port-lick-detector/ | SCR_021521 | DP-Lick-Detector | 2026-02-16 09:50:03 | 0 | |||||||
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SHARCQ Resource Report Resource Website 1+ mentions |
SHARCQ (RRID:SCR_022498) | software resource, software toolkit | Software tools to register histological section images and cell count locations to mouse brain atlas. Semi automated workflow and GUI for automated brain slice histology alignment, registration, and cell quantification. Used to explore Allen Mouse Brain Atlas, register asymmetric slice images to atlas using manual input, and analyze region of interest data by registering locations of fluorescently labeled cells to standardized regions of Atlas. | OpenBehavior, atlas registration, brain mapping, cell-type, slicing, histology, cell quantification, automated, brain atlas, mice |
is listed by: OpenBehavior is related to: Allen Mouse Brain Reference Atlas is related to: Allen Institute for Brain Science has parent organization: University of Colorado Boulder; Colorado; USA |
PMID:35396257 | Free, Available for download, Freely available | https://edspace.american.edu/openbehavior/project/sharcq/ | SCR_022498 | Slice Histology Alignment, and Cell Quantification, Registration | 2026-02-16 09:50:24 | 2 |
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