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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Georgia Genomics and Bioinformatics Core at the University of Georgia Resource Report Resource Website 50+ mentions |
Georgia Genomics and Bioinformatics Core at the University of Georgia (RRID:SCR_010994) | GGBC | access service resource, core facility, training service resource, service resource | Core laboratory for nucleic acid sequencing and bioinformatics. Used for research support, education, and training. Services include genomic techniques and applications, sequencing technologies, and bioinformatics analyses, writting letters of support for grant applications submitted to funding agencies. GGBC operates multiple platforms for short-, long-, and single-molecule sequencing reads (i.e., Illumina MiSeq and NextSeq, PacBio Sequel, and Oxford Nanopore MinIon). | nucleic, acid, sequencing, labs, analysis, equipment, genomic, technique, analysis, grant, application |
is listed by: ScienceExchange is related to: University of Georgia Labs and Facilities has parent organization: University of Georgia; Georgia; USA |
SciEx_9234 | http://www.scienceexchange.com/facilities/georgia-genomics-facility-uga, http://www.scienceexchange.com/facilities/georgia-genomics-facility-uga | SCR_010994 | Georgia Genomics & Bioinformatics Core, Georgia Genomics and Bioinformatics Core at UGA, University of Georgia Genomics Facility, Georgia Genomics and Bioinformatics Core | 2026-02-15 09:20:22 | 71 | |||||||
|
Centrillion Biosciences Inc. Resource Report Resource Website 1+ mentions |
Centrillion Biosciences Inc. (RRID:SCR_012358) | Centrillion | access service resource, core facility, service resource | Centrillion offers a portfolio of genomic services to academic, clinical and industrial researchers. Core provides experimental design consultation, data production services, and bioinformatics analyses for a wide variety of genomic applications. Core offers access to next-gen sequencing, genotyping and bioinformatics analysis. | genomic, consultation, consulting, data production, bioinformatics analyses, sequencing | is listed by: ScienceExchange | Available to external user | SciEx_12068 | http://www.centrilliontech.com/ | SCR_012358 | Centrillion Biosciences | 2026-02-15 09:20:29 | 6 | ||||||
|
RVTESTS Resource Report Resource Website 50+ mentions |
RVTESTS (RRID:SCR_007639) | RVTESTS | software application, software resource | Software application (entry from Genetic Analysis Software) | gene, genetic, genomic, c++ | is listed by: Genetic Analysis Software | nlx_154603 | SCR_007639 | Rare Variants TESTS | 2026-02-15 09:19:46 | 86 | ||||||||
|
HAPLO 1 Resource Report Resource Website |
HAPLO 1 (RRID:SCR_009058) | HAPLO 1 | software application, software resource | THIS RESOURCE IS NO LONGER IN SERVICE. Documented on May 16,2023. Software application that assigns each person the haplotype with the highest conditional probability using Elston-Stewart algorithm (entry from Genetic Analysis Software) | gene, genetic, genomic, fortran 77, (ansi standard), unix, sunos, solaris, hp | is listed by: Genetic Analysis Software | THIS RESOURCE IS NO LONGER IN SERVICE | nlx_154039 | SCR_009058 | Haplotyping with computation of conditional probabilities | 2026-02-15 09:20:02 | 0 | |||||||
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HAPLOREC Resource Report Resource Website 1+ mentions |
HAPLOREC (RRID:SCR_009055) | HAPLOREC | software application, software resource | Software application for population-based haplotyping (entry from Genetic Analysis Software) | gene, genetic, genomic | is listed by: Genetic Analysis Software | nlx_154036 | SCR_009055 | 2026-02-15 09:19:56 | 4 | |||||||||
|
EH Resource Report Resource Website |
EH (RRID:SCR_009168) | EH | software application, software resource | Software application (entry from Genetic Analysis Software) | gene, genetic, genomic, pascal, ms-dos, unix | is listed by: Genetic Analysis Software | nlx_154291 | SCR_009168 | FASTEHPLUS, EHP, Estimating Haplotype-frequencies EHPLUS | 2026-02-15 09:19:58 | 0 | ||||||||
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EAGLET Resource Report Resource Website 1+ mentions |
EAGLET (RRID:SCR_009166) | EAGLET | software application, software resource | THIS RESOURCE IS NO LONGER IN SERVCE, documented September 22, 2016. Software package that provides a number of improved statistics for detecting linkage and estimating trait location. EAGLET uses multiple subsamples of dense SNP data to detect linkage with increased power, and to construct sharp 95% confidence intervals for the true trait location. | gene, genetic, genomic, perl, c, linux, macos | is listed by: Genetic Analysis Software | THIS RESOURCE IS NO LONGER IN SERVICE | nlx_154288 | SCR_009166 | Efficient Analysis of Genetic Linkage: Testing and Estimation | 2026-02-15 09:20:05 | 1 | |||||||
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EASYLINKAGE/EASYLINKAGE-PLUS Resource Report Resource Website 1+ mentions |
EASYLINKAGE/EASYLINKAGE-PLUS (RRID:SCR_009167) | EASYLINKAGE/EASYLINKAGE-PLUS | software application, software resource | Software application that combines automated setup and performance of linkage analyses and simulation. The program package supports currently single-point linkage analyses, multi-point linkage analyses, and the simulation package SLink, and provides genome-wide as well as chromosomal postscript plots of LOD scores, NPL scores, P values, and other parameters. The software can analyze STRPs as well as SNP chip data from Affymetrix, Illumina, or self-defined SNP data. The program performs single- and multi-point simulation studies. | gene, genetic, genomic, perl, v5.8 (program can be provided as perl script or as a compiled exe for the use in windows), ms-windows, (2000/xp), linux | is listed by: Genetic Analysis Software | nlx_154289 | https://omictools.com/easylinkage-tool | http://compbio.charite.de/genetik/hoffmann/easyLINKAGE/ | SCR_009167 | 2026-02-15 09:20:05 | 5 | |||||||
|
DPPH Resource Report Resource Website 1000+ mentions |
DPPH (RRID:SCR_009164) | DPPH | software application, software resource | Software application that is similar to the BPPH program (entry from Genetic Analysis Software), THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025. | gene, genetic, genomic, linux, macos | is listed by: Genetic Analysis Software | THIS RESOURCE IS NO LONGER IN SERVICE | nlx_154287 | SCR_009164 | Direct method for Perfect Phylogeney Haplotyping | 2026-02-15 09:19:58 | 1148 | |||||||
|
GREGOR Resource Report Resource Website 10+ mentions |
GREGOR (RRID:SCR_009165) | GREGOR | software application, software resource | Software program that allows students and scientists to explore potential manifestations of genetic models and stochastic processes. It also provides a means to evaluate the effectiveness of statistical procedures such as linkage analysis or QTL detection. (entry from Genetic Analysis Software), THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025. | gene, genetic, genomic, ms-dos | is listed by: Genetic Analysis Software | THIS RESOURCE IS NO LONGER IN SERVICE | nlx_154364 | http://gnome.agrenv.mcgill.ca/tinker/gregor.htm | SCR_009165 | 2026-02-15 09:19:39 | 47 | |||||||
|
MAKEPED Resource Report Resource Website 1+ mentions |
MAKEPED (RRID:SCR_009162) | MAKEPED | software application, software resource | Software application - part of the LINKAGE auxiliary programs (entry from Genetic Analysis Software) | gene, genetic, genomic, c and pascal, unix, vms, ms-dos, os2 | is listed by: Genetic Analysis Software | nlx_154285 | SCR_009162 | MAKE PEDfiles | 2026-02-15 09:20:05 | 1 | ||||||||
|
DOLINK Resource Report Resource Website |
DOLINK (RRID:SCR_009163) | DOLINK | software application, software resource | THIS RESOURCE IS NO LONGER IN SERVICE. Documented on May 16,2023. Software application that manage genetic data (entry from Genetic Analysis Software) | gene, genetic, genomic, c++, ms-dos, ms-windows | is listed by: Genetic Analysis Software | THIS RESOURCE IS NO LONGER IN SERVICE | nlx_154286 | SCR_009163 | WDLINK | 2026-02-15 09:20:05 | 0 | |||||||
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DISENTANGLER Resource Report Resource Website 1+ mentions |
DISENTANGLER (RRID:SCR_009161) | DISENTANGLER | software application, software resource | Software application that is a visualization technique for linkage disequilibrium mapping and haplotype analysis of multiple multi-allelic genetic markers. (entry from Genetic Analysis Software) | gene, genetic, genomic, java/jre1.5, bio.tools |
is listed by: Genetic Analysis Software is listed by: bio.tools is listed by: Debian |
nlx_154284, bIotools:disentangler | https://bio.tools/disentangler | SCR_009161 | 2026-02-15 09:19:39 | 4 | ||||||||
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ALOHOMORA Resource Report Resource Website 1+ mentions |
ALOHOMORA (RRID:SCR_009117) | ALOHOMORA | software application, software resource | Software application designed to facilitate genome-wide linkage studies performed with high-density single nucleotide polymorphism (SNP) marker panels such as the Affymetrix GeneChip(R) Human Mapping 10K Array. (entry from Genetic Analysis Software) | gene, genetic, genomic, perl, ms-window, linux, unix, solaris, bio.tools |
is listed by: Genetic Analysis Software is listed by: bio.tools is listed by: Debian |
nlx_154219, biotools:alohomora | https://bio.tools/alohomora | SCR_009117 | 2026-02-15 09:20:04 | 8 | ||||||||
|
ALP Resource Report Resource Website |
ALP (RRID:SCR_009118) | ALP | software application, software resource | Microsoft Windows application designed to analyze microsatellite DNA fragments separated on an Automated Laser Fluorescence sequencer. (entry from Genetic Analysis Software) | gene, genetic, genomic, c, ms-windows, (3.1/95/nt) | is listed by: Genetic Analysis Software | nlx_154220 | SCR_009118 | Automated Linkage Preprocessor | 2026-02-15 09:20:04 | 0 | ||||||||
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SIMULAPLOT Resource Report Resource Website |
SIMULAPLOT (RRID:SCR_009079) | SIMULAPLOT | software application, software resource | THIS RESOURCE IS NO LONGER IN SERVCE, documented September 22, 2016. A tool designed to help visualize the joint effect of genes and continuous environmental covariates on complex human disease simulation models. | gene, genetic, genomic, r | is listed by: Genetic Analysis Software | THIS RESOURCE IS NO LONGER IN SERVICE | nlx_154089 | http://www.chg.duke.edu/research/simlaplot.html | SCR_009079 | 2026-02-15 09:19:57 | 0 | |||||||
|
TUNA Resource Report Resource Website 1+ mentions |
TUNA (RRID:SCR_009112) | TUNA | software application, software resource | THIS RESOURCE IS NO LONGER IN SERVICE, documented September 22, 2016. Free software package for estimating allele frequencies for all the SNPs available in a population reference panel (e.g. HapMap data base) based on genotype data from a subset of markers (e.g. the Illumina HumanHap300 BeadChip SNP set) in a group of subjects (e.g. the cases in a case-control sample)., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025. | gene, genetic, genomic | is listed by: Genetic Analysis Software | PMID:18057020 | THIS RESOURCE IS NO LONGER IN SERVICE | nlx_154211 | SCR_009112 | Testing UNtyped Alleles | 2026-02-15 09:19:38 | 2 | ||||||
|
CASPAR Resource Report Resource Website 50+ mentions |
CASPAR (RRID:SCR_009074) | CASPAR | software application, software resource | Software application who''s main novel feature is conditional linkage analyses, in which the population can be subdivided according to criteria at some loci and analyzed for linkage at other loci. CASPAR uses simulation to overcome the problems inherent in such multiple testing. (entry from Genetic Analysis Software) | gene, genetic, genomic, c, unix, bio.tools |
is listed by: Genetic Analysis Software is listed by: bio.tools is listed by: Debian |
biotools:caspar, nlx_154071 | https://bio.tools/caspar | SCR_009074 | Computerized Affected Sibling Pair Analyzer and Reporter | 2026-02-15 09:20:03 | 52 | |||||||
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WEBQTL Resource Report Resource Website 10+ mentions |
WEBQTL (RRID:SCR_009072) | WEBQTL | software application, software resource | An interactive web site useful for exploring the genetic modulation of thousands of phenotypes gathered over a 30-year period by hundreds of investigators using reference panels of recombinant inbred strains of mice. WebQTL includes dense error-checked genetic maps, as well as extensive gene expression data sets (Affymetrix) acquired across more than 35 strains of mice. WebQTL accepts user-entered traits for BXD, AXB/BXA, CXB, BXH, AKXD recombinant inbred strains. (entry from Genetic Analysis Software) | gene, genetic, genomic, c++, and, python, all via internet | is listed by: Genetic Analysis Software | nlx_154066 | http://www.webqtl.org/search.html | SCR_009072 | 2026-02-15 09:19:37 | 46 | ||||||||
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genehunter-imprinting Resource Report Resource Website 1+ mentions |
genehunter-imprinting (RRID:SCR_009104) | GENEHUNTER-TWOLOCUS | software application, software resource | Resource no longer in service. Documented on February 23,2021.Software tool as modification of GENEHUNTER software package . Allows for parametric multi-marker linkage analysis of dichotomous traits caused by imprinted genes. By specification of two heterozygote penetrance parameters, paternal and maternal origin of the disease allele can be treated differently in terms of probability of expression of the trait. | gene, genetic, genomic, c, unix, sunos, solaris, osf, hpux, aix, ultrix, linux, ms-windows, bio.tools |
is listed by: Genetic Analysis Software is listed by: Debian is listed by: bio.tools |
DOI:10.1086/302911 | Resource no longer in service. Documented on February 23,2021 | nlx_154199, biotools:genehunter-imprinting | https://bio.tools/genehunter-imprinting | http://www.staff.uni-marburg.de/~strauchk/software.html | SCR_009104 | GENEHUNTER-MODSCORE, GENEHUNTER-PLUS, GENEHUNTER, GENEHUNTER-IMPRINTING | 2026-02-15 09:19:57 | 1 |
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