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URL: https://github.com/chhylp123/hifiasm
Proper Citation: Hifiasm (RRID:SCR_021069)
Description: Software tool as haplotype resolved de novo assembler for PacBio Hifi reads. Can assemble human genome in several hours.Introduces new graph binning algorithm and achieves haplotype resolved assembly given trio data. Takes advantage of long high fidelity sequence reads to represent haplotype information in phased assembly graph. Preserves contiguity of all haplotypes.
Resource Type: software application, data processing software, sequence analysis software, data analysis software, software resource
Defining Citation: PMID:33526886
Keywords: PacBio Hifi reads, haplotype resolved de novo assembler, trio data, long high fidelity sequence reads,
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