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URL: http://wwwmgs.bionet.nsc.ru/mgs/gnw/pdbsite/
Proper Citation: Protein Data Bank Site (RRID:SCR_008227)
Description: Protein Data Bank (PDB) contains data on the spatial protein structures and their biologically active sites (i.e., ligand binding regions, enzyme catalytic centers, regions subjected to biochemical modifications, etc.). However, neither of the well known systems searching PDB does not provide the user with possibility to make the queries related with the active sites. A database PDBSITE storing the data on biologically active sites contained in the PDB database has been developed. PDBSITE accumulates amino acid content, structure features calculated by spatial protein structures, and physicochemical properties of sites and their spatial surroundings.
Abbreviations: PDBSITE
Resource Type: data or information resource, database
Defining Citation: PMID:15608173
Keywords: enzyme, functional, active, activity, amino acid, binding, biochemical, biological, biologically, biology, biotechnology, catalytic, dna, heterocomplex, inorganic, interaction, ligand, medicine, modification, molecular, organic, pattern, physiochemical, post-translational, primary, protein, protein sequence motifs and active sites databases, residue, rna, site, spatial, specificity, structural, structure, tertiary
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Research Collaboratory for Structural Bioinformatics Protein Data Bank (RCSB PDB) |
is used by |
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has parent organization |
Siberian Branch of the Russian Academy of Sciences; Novosibirsk; Russia |
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The NIDDK Information Network (dkNET) serves the needs of basic and clinical investigators by providing seamless access to large pools of data and research resources relevant to the mission of The National Institute of Diabetes Digestive and Kidney Diseases (NIDDK). dkNET is hosted at University of California San Diego, and is supported by NIH NIDDK grant 2U24DK097771-09.
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